RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeastyeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPR28YDR218C SWI1P09547 1314 aa3.92□□□□□ -1.78
SPR28YDR218C CDC28P00546 298 aaKnown RBP3.91□□□□□ -1.78
SPR28YDR218C RPS18AP0CX55 146 aaKnown RBP3.91□□□□□ -1.78
SPR28YDR218C RPS18BP0CX56 146 aaPredicted RBP3.91□□□□□ -1.78
SPR28YDR218C SKI3P17883 1432 aaKnown RBP3.91□□□□□ -1.78
SPR28YDR218C TRS65P32893 560 aa3.91□□□□□ -1.78
SPR28YDR218C CLG1P35190 452 aa3.91□□□□□ -1.78
SPR28YDR218C PAN6P40459 309 aa3.91□□□□□ -1.78
SPR28YDR218C SER33P40510 469 aa3.91□□□□□ -1.78
SPR28YDR218C RRT5P43607 289 aa3.91□□□□□ -1.78
SPR28YDR218C MDV1P47025 714 aa3.91□□□□□ -1.78
SPR28YDR218C IKS1P47042 667 aa3.91□□□□□ -1.78
SPR28YDR218C COS1P53822 381 aa3.91□□□□□ -1.78
SPR28YDR218C IMP4P53941 290 aaKnown RBP3.91□□□□□ -1.78
SPR28YDR218C SCS7Q03529 384 aa3.91□□□□□ -1.78
SPR28YDR218C SLM3Q12093 417 aa3.91□□□□□ -1.78
SPR28YDR218C HRT3Q12347 344 aa3.91□□□□□ -1.78
SPR28YDR218C CDC8P00572 216 aa3.9□□□□□ -1.79
SPR28YDR218C MIR1P23641 311 aaKnown RBP3.9□□□□□ -1.79
SPR28YDR218C SEC14P24280 304 aaKnown RBP3.9□□□□□ -1.79
SPR28YDR218C FUN26P31381 517 aa3.9□□□□□ -1.79
SPR28YDR218C SSH1P38353 490 aaKnown RBP3.9□□□□□ -1.79
SPR28YDR218C OXA1P39952 402 aa3.9□□□□□ -1.79
SPR28YDR218C LSM4P40070 187 aaKnown RBP3.9□□□□□ -1.79
SPR28YDR218C OST1P41543 476 aaKnown RBP3.9□□□□□ -1.79
SPR28YDR218C YGR201CP42936 225 aa3.9□□□□□ -1.79
SPR28YDR218C SNO3P43544 222 aa3.9□□□□□ -1.79
SPR28YDR218C CCC1P47818 322 aa3.9□□□□□ -1.79
SPR28YDR218C LIP2Q06005 328 aa3.9□□□□□ -1.79
SPR28YDR218C SUE1Q06524 206 aa3.9□□□□□ -1.79
SPR28YDR218C RFU1Q08003 200 aa3.9□□□□□ -1.79
SPR28YDR218C YGK3Q12222 375 aaPredicted RBP3.9□□□□□ -1.79
SPR28YDR218C CSR2Q12734 1121 aa3.9□□□□□ -1.79
SPR28YDR218C HHF1P02309 103 aaKnown RBP3.89□□□□□ -1.79
SPR28YDR218C MRS1P07266 363 aa3.89□□□□□ -1.79
SPR28YDR218C MET2P08465 486 aa3.89□□□□□ -1.79
SPR28YDR218C LDS1P31379 325 aa3.89□□□□□ -1.79
SPR28YDR218C NAT2P37293 288 aa3.89□□□□□ -1.79
SPR28YDR218C PET8P38921 284 aa3.89□□□□□ -1.79
SPR28YDR218C RRG9P40156 214 aa3.89□□□□□ -1.79
SPR28YDR218C MRPL49P40858 161 aaPredicted RBP3.89□□□□□ -1.79
SPR28YDR218C FAR7P43592 221 aa3.89□□□□□ -1.79
SPR28YDR218C IDP3P53982 420 aaKnown RBP3.89□□□□□ -1.79
SPR28YDR218C SUR7P54003 302 aa3.89□□□□□ -1.79
SPR28YDR218C YML108WQ03759 105 aa3.89□□□□□ -1.79
SPR28YDR218C PKR1Q03880 122 aaKnown RBP3.89□□□□□ -1.79
SPR28YDR218C HNT1Q04344 158 aaKnown RBP3.89□□□□□ -1.79
SPR28YDR218C FSH2Q05015 223 aa3.89□□□□□ -1.79
SPR28YDR218C YDL199CQ12407 687 aa3.89□□□□□ -1.79
SPR28YDR218C EFG1Q3E705 233 aaKnown RBP3.89□□□□□ -1.79
SPR28YDR218C RPO41P13433 1351 aaKnown RBP3.89□□□□□ -1.79
SPR28YDR218C STE7P06784 515 aa3.88□□□□□ -1.79
SPR28YDR218C CDC50P25656 391 aa3.88□□□□□ -1.79
SPR28YDR218C CAT2P32796 670 aaKnown RBP3.88□□□□□ -1.79
SPR28YDR218C APS1P35181 156 aa3.88□□□□□ -1.79
SPR28YDR218C MIX23P38162 196 aa3.88□□□□□ -1.79
SPR28YDR218C ECM14P38836 430 aa3.88□□□□□ -1.79
SPR28YDR218C RMD6P39975 231 aa3.88□□□□□ -1.79
SPR28YDR218C PHB1P40961 287 aa3.88□□□□□ -1.79
SPR28YDR218C YGL034CP53186 121 aa3.88□□□□□ -1.79
SPR28YDR218C SCW4P53334 386 aaKnown RBP3.88□□□□□ -1.79
SPR28YDR218C MPA43P53583 542 aaPredicted RBP3.88□□□□□ -1.79
SPR28YDR218C GOT1Q03554 138 aa3.88□□□□□ -1.79
SPR28YDR218C RAV2Q03956 351 aa3.88□□□□□ -1.79
SPR28YDR218C UTP15Q04305 513 aaKnown RBP3.88□□□□□ -1.79
SPR28YDR218C RAX2Q12465 1220 aa3.88□□□□□ -1.79
SPR28YDR218C RAD50P12753 1312 aa3.88□□□□□ -1.79
SPR28YDR218C RPL25P04456 142 aaKnown RBP3.87□□□□□ -1.79
SPR28YDR218C PBI2P0CT04 75 aaKnown RBP3.87□□□□□ -1.79
SPR28YDR218C EPT1P22140 391 aa3.87□□□□□ -1.79
SPR28YDR218C SCO1P23833 295 aa3.87□□□□□ -1.79
SPR28YDR218C OAC1P32332 324 aa3.87□□□□□ -1.79
SPR28YDR218C YKR041WP36134 250 aa3.87□□□□□ -1.79
SPR28YDR218C LSM12P38828 187 aaKnown RBP3.87□□□□□ -1.79
SPR28YDR218C NVJ1P38881 321 aa3.87□□□□□ -1.79
SPR28YDR218C GLE2P40066 365 aa3.87□□□□□ -1.79
SPR28YDR218C FMP32P43557 207 aa3.87□□□□□ -1.79
SPR28YDR218C AIM25P47140 327 aa3.87□□□□□ -1.79
SPR28YDR218C ILM1P47155 203 aa3.87□□□□□ -1.79
SPR28YDR218C RCF2P53721 224 aa3.87□□□□□ -1.79
SPR28YDR218C TMA20P89886 181 aaPredicted RBP3.87□□□□□ -1.79
SPR28YDR218C DYN2Q02647 92 aa3.87□□□□□ -1.79
SPR28YDR218C FAR10Q06001 478 aa3.87□□□□□ -1.79
SPR28YDR218C YPL257WQ08974 193 aa3.87□□□□□ -1.79
SPR28YDR218C MHT1Q12525 324 aa3.87□□□□□ -1.79
SPR28YDR218C RPS14AP06367 137 aaKnown RBP3.86□□□□□ -1.79
SPR28YDR218C GRX2P17695 143 aaKnown RBP3.86□□□□□ -1.79
SPR28YDR218C UBC8P28263 218 aa3.86□□□□□ -1.79
SPR28YDR218C RCK1P38622 512 aa3.86□□□□□ -1.79
SPR28YDR218C RPS14BP39516 138 aaKnown RBP3.86□□□□□ -1.79
SPR28YDR218C CFD1P40558 293 aa3.86□□□□□ -1.79
SPR28YDR218C EGT2P42835 1041 aa3.86□□□□□ -1.79
SPR28YDR218C YFL067WP43537 175 aa3.86□□□□□ -1.79
SPR28YDR218C NCA3P46955 337 aa3.86□□□□□ -1.79
SPR28YDR218C SYF2P53277 215 aaPredicted RBP3.86□□□□□ -1.79
SPR28YDR218C SWP1Q02795 286 aa3.86□□□□□ -1.79
SPR28YDR218C YDR124WQ04608 324 aa3.86□□□□□ -1.79
SPR28YDR218C SYC1Q08553 188 aaPredicted RBP3.86□□□□□ -1.79
SPR28YDR218C YLR361C-AQ3E795 98 aa3.86□□□□□ -1.79
SPR28YDR218C SNF4P12904 322 aa3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms