RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	YBR137W	P38276	179 aa		3.84	□□□□□ -1.79
RPC53	YDL150W	GPI16	P38875	610 aa		3.84	□□□□□ -1.79
RPC53	YDL150W	RCY1	P39531	840 aa		3.84	□□□□□ -1.79
RPC53	YDL150W	REE1	P40893	198 aa		3.84	□□□□□ -1.79
RPC53	YDL150W	PHB1	P40961	287 aa		3.84	□□□□□ -1.79
RPC53	YDL150W	CUP9	P41817	306 aa		3.84	□□□□□ -1.79
RPC53	YDL150W	GCN20	P43535	752 aa	Known RBP	3.84	□□□□□ -1.79
RPC53	YDL150W	MPC1	P53157	130 aa	Known RBP	3.84	□□□□□ -1.79
RPC53	YDL150W	EOS1	P53938	366 aa		3.84	□□□□□ -1.79
RPC53	YDL150W	YLR460C	P54007	376 aa		3.84	□□□□□ -1.79
RPC53	YDL150W	RPL6A	Q02326	176 aa	Known RBP	3.84	□□□□□ -1.79
RPC53	YDL150W	YMR099C	Q03161	297 aa	Known RBP	3.84	□□□□□ -1.79
RPC53	YDL150W	ADD37	Q03233	198 aa		3.84	□□□□□ -1.79
RPC53	YDL150W	AKR2	Q12013	749 aa		3.84	□□□□□ -1.79
RPC53	YDL150W	YDL211C	Q12121	372 aa		3.84	□□□□□ -1.79
RPC53	YDL150W	NFI1	Q12216	726 aa		3.84	□□□□□ -1.79
RPC53	YDL150W	TPO4	Q12256	659 aa		3.84	□□□□□ -1.79
RPC53	YDL150W	RIB3	Q99258	208 aa		3.84	□□□□□ -1.79
RPC53	YDL150W	TPK3	P05986	398 aa		3.83	□□□□□ -1.8
RPC53	YDL150W	NFT1	P0CE68	1218 aa		3.83	□□□□□ -1.8
RPC53	YDL150W	YOL163W	P0CF20	169 aa		3.83	□□□□□ -1.8
RPC53	YDL150W	ERD2	P18414	219 aa		3.83	□□□□□ -1.8
RPC53	YDL150W	ATG15	P25641	520 aa		3.83	□□□□□ -1.8
RPC53	YDL150W	ITR2	P30606	609 aa		3.83	□□□□□ -1.8
RPC53	YDL150W	CHK1	P38147	527 aa		3.83	□□□□□ -1.8
RPC53	YDL150W	ECM8	P38246	354 aa		3.83	□□□□□ -1.8
RPC53	YDL150W	PTH1	P38876	190 aa	Known RBP	3.83	□□□□□ -1.8
RPC53	YDL150W	MLH1	P38920	769 aa		3.83	□□□□□ -1.8
RPC53	YDL150W	RIO2	P40160	425 aa	Known RBP	3.83	□□□□□ -1.8
RPC53	YDL150W	JLP2	P40206	208 aa		3.83	□□□□□ -1.8
RPC53	YDL150W	PRE6	P40303	254 aa	Known RBP	3.83	□□□□□ -1.8
RPC53	YDL150W	YGR210C	P42942	411 aa		3.83	□□□□□ -1.8
RPC53	YDL150W	SHE4	P51534	789 aa		3.83	□□□□□ -1.8
RPC53	YDL150W	SEH1	P53011	349 aa	Known RBP	3.83	□□□□□ -1.8
RPC53	YDL150W	MPA43	P53583	542 aa	Predicted RBP	3.83	□□□□□ -1.8
RPC53	YDL150W	NCE101	Q02820	53 aa		3.83	□□□□□ -1.8
RPC53	YDL150W	SMP3	Q04174	516 aa		3.83	□□□□□ -1.8
RPC53	YDL150W	URC2	Q04411	772 aa		3.83	□□□□□ -1.8
RPC53	YDL150W	SEI1	Q06058	285 aa		3.83	□□□□□ -1.8
RPC53	YDL150W	REX3	Q12090	404 aa		3.83	□□□□□ -1.8
RPC53	YDL150W	CDC39	P25655	2108 aa	Known RBP	3.83	□□□□□ -1.8
RPC53	YDL150W	TRP1	P00912	224 aa		3.82	□□□□□ -1.8
RPC53	YDL150W	ARF1	P11076	181 aa	Known RBP	3.82	□□□□□ -1.8
RPC53	YDL150W	SNF6	P18888	332 aa		3.82	□□□□□ -1.8
RPC53	YDL150W	PBN1	P25580	416 aa		3.82	□□□□□ -1.8
RPC53	YDL150W	YCR102C	P25608	368 aa		3.82	□□□□□ -1.8
RPC53	YDL150W	QDR3	P38227	689 aa		3.82	□□□□□ -1.8
RPC53	YDL150W	YBR285W	P38354	144 aa		3.82	□□□□□ -1.8
RPC53	YDL150W	SBE22	P38814	852 aa		3.82	□□□□□ -1.8
RPC53	YDL150W	WSS1	P38838	269 aa		3.82	□□□□□ -1.8
RPC53	YDL150W	TDA11	P38854	504 aa		3.82	□□□□□ -1.8
RPC53	YDL150W	AST2	P39945	430 aa	Known RBP	3.82	□□□□□ -1.8
RPC53	YDL150W	RRG9	P40156	214 aa		3.82	□□□□□ -1.8
RPC53	YDL150W	SOK1	P40317	901 aa		3.82	□□□□□ -1.8
RPC53	YDL150W	BAT2	P47176	376 aa	Known RBP	3.82	□□□□□ -1.8
RPC53	YDL150W	LSG1	P53145	640 aa	Known RBP	3.82	□□□□□ -1.8
RPC53	YDL150W	ABZ2	Q03266	374 aa		3.82	□□□□□ -1.8
RPC53	YDL150W	BRX1	Q08235	291 aa	Known RBP	3.82	□□□□□ -1.8
RPC53	YDL150W	YOR376W	Q08900	122 aa		3.82	□□□□□ -1.8
RPC53	YDL150W	CAR2	P07991	424 aa	Known RBP	3.81	□□□□□ -1.8
RPC53	YDL150W	SSA3	P09435	649 aa	Known RBP	3.81	□□□□□ -1.8
RPC53	YDL150W	YOL162W	P0CF19	215 aa		3.81	□□□□□ -1.8
RPC53	YDL150W	TFS1	P14306	219 aa		3.81	□□□□□ -1.8
RPC53	YDL150W	HSP150	P32478	413 aa		3.81	□□□□□ -1.8
RPC53	YDL150W	DAD2	P36162	133 aa		3.81	□□□□□ -1.8
RPC53	YDL150W	RPS20	P38701	121 aa	Known RBP	3.81	□□□□□ -1.8
RPC53	YDL150W	NSG1	P38837	291 aa		3.81	□□□□□ -1.8
RPC53	YDL150W	EGD2	P38879	174 aa	Known RBP	3.81	□□□□□ -1.8
RPC53	YDL150W	COX14	P39103	70 aa		3.81	□□□□□ -1.8
RPC53	YDL150W	MSS2	P40990	351 aa		3.81	□□□□□ -1.8
RPC53	YDL150W	COS1	P53822	381 aa		3.81	□□□□□ -1.8
RPC53	YDL150W	CWC25	P53854	179 aa	Known RBP	3.81	□□□□□ -1.8
RPC53	YDL150W	COG5	P53951	403 aa		3.81	□□□□□ -1.8
RPC53	YDL150W	TMA20	P89886	181 aa	Predicted RBP	3.81	□□□□□ -1.8
RPC53	YDL150W	MEH1	Q02205	184 aa		3.81	□□□□□ -1.8
RPC53	YDL150W	GRX5	Q02784	150 aa		3.81	□□□□□ -1.8
RPC53	YDL150W	SPO19	Q03029	223 aa		3.81	□□□□□ -1.8
RPC53	YDL150W	TLG1	Q03322	224 aa		3.81	□□□□□ -1.8
RPC53	YDL150W	YMD8	Q03697	442 aa		3.81	□□□□□ -1.8
RPC53	YDL150W	PAL1	Q05518	499 aa	Known RBP	3.81	□□□□□ -1.8
RPC53	YDL150W	YFH1	Q07540	174 aa		3.81	□□□□□ -1.8
RPC53	YDL150W	YOR097C	Q12274	175 aa	Predicted RBP	3.81	□□□□□ -1.8
RPC53	YDL150W	YOS9	Q99220	542 aa		3.81	□□□□□ -1.8
RPC53	YDL150W	RAD51	P25454	400 aa		3.8	□□□□□ -1.8
RPC53	YDL150W	TIM12	P32830	109 aa		3.8	□□□□□ -1.8
RPC53	YDL150W	MNS1	P32906	549 aa		3.8	□□□□□ -1.8
RPC53	YDL150W	JEN1	P36035	616 aa		3.8	□□□□□ -1.8
RPC53	YDL150W	RTC2	P38279	296 aa		3.8	□□□□□ -1.8
RPC53	YDL150W	OM14	P38325	134 aa		3.8	□□□□□ -1.8
RPC53	YDL150W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.8	□□□□□ -1.8	not detected
RPC53	YDL150W	YHR180W	P38868	163 aa		3.8	□□□□□ -1.8
RPC53	YDL150W	SOP4	P39543	234 aa	Predicted RBP	3.8	□□□□□ -1.8
RPC53	YDL150W	AVT6	P40074	448 aa		3.8	□□□□□ -1.8
RPC53	YDL150W	YNL208W	P40159	199 aa	Known RBP	3.8	□□□□□ -1.8
RPC53	YDL150W	SIM1	P40472	476 aa		3.8	□□□□□ -1.8
RPC53	YDL150W	MTM1	P53320	366 aa		3.8	□□□□□ -1.8
RPC53	YDL150W	SNZ1	Q03148	297 aa		3.8	□□□□□ -1.8
RPC53	YDL150W	HRI1	Q05905	244 aa	Known RBP	3.8	□□□□□ -1.8
RPC53	YDL150W	YLR446W	Q06204	433 aa		3.8	□□□□□ -1.8
RPC53	YDL150W	ATG17	Q06410	417 aa		3.8	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms