RNA–Protein interactions for RNA: YAL009W

SPO7, Transcript of Putative regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme, yeast

Gene SPO7, Length 780 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO7	YAL009W	SSE2	P32590	693 aa	Known RBP	4.92	□□□□□ -1.62
SPO7	YAL009W	VMA11	P32842	164 aa		4.92	□□□□□ -1.62
SPO7	YAL009W	YPK3	P38070	525 aa		4.92	□□□□□ -1.62
SPO7	YAL009W	YHR035W	P38769	630 aa		4.92	□□□□□ -1.62
SPO7	YAL009W	CIN2	P46670	268 aa		4.92	□□□□□ -1.62
SPO7	YAL009W	YJL016W	P47072	561 aa		4.92	□□□□□ -1.62
SPO7	YAL009W	PHB2	P50085	310 aa		4.92	□□□□□ -1.62
SPO7	YAL009W	APJ1	P53940	528 aa		4.92	□□□□□ -1.62
SPO7	YAL009W	RNH201	P53942	307 aa		4.92	□□□□□ -1.62
SPO7	YAL009W	SAM50	P53969	484 aa		4.92	□□□□□ -1.62
SPO7	YAL009W	HHT1	P61830	136 aa		4.92	□□□□□ -1.62
SPO7	YAL009W	FIN1	Q03898	291 aa		4.92	□□□□□ -1.62
SPO7	YAL009W	GPI17	Q04080	534 aa		4.92	□□□□□ -1.62
SPO7	YAL009W	DLT1	Q04216	342 aa		4.92	□□□□□ -1.62
SPO7	YAL009W	GMC1	Q04399	608 aa		4.92	□□□□□ -1.62
SPO7	YAL009W	ISA2	Q12425	185 aa		4.92	□□□□□ -1.62
SPO7	YAL009W	TMA7	Q3E764	64 aa	Known RBP	4.92	□□□□□ -1.62
SPO7	YAL009W	PUT3	P25502	979 aa	Predicted RBP	4.91	□□□□□ -1.62
SPO7	YAL009W	PRP21	P32524	280 aa	Predicted RBP	4.91	□□□□□ -1.62
SPO7	YAL009W	ANR2	P36090	516 aa	Predicted RBP	4.91	□□□□□ -1.62
SPO7	YAL009W	SOP4	P39543	234 aa	Predicted RBP	4.91	□□□□□ -1.62
SPO7	YAL009W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
SPO7	YAL009W	YHC3	P47040	408 aa		4.91	□□□□□ -1.62
SPO7	YAL009W	ABM1	P47146	123 aa		4.91	□□□□□ -1.62
SPO7	YAL009W	YDC1	Q02896	317 aa		4.91	□□□□□ -1.62
SPO7	YAL009W	YMR087W	Q04299	284 aa		4.91	□□□□□ -1.62
SPO7	YAL009W	YDR114C	Q04597	100 aa		4.91	□□□□□ -1.62
SPO7	YAL009W	RIM9	Q04734	239 aa		4.91	□□□□□ -1.62
SPO7	YAL009W	ATG33	Q06485	197 aa		4.91	□□□□□ -1.62
SPO7	YAL009W	THP3	Q12049	470 aa	Known RBP	4.91	□□□□□ -1.62
SPO7	YAL009W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
SPO7	YAL009W	RPL15A	P05748	204 aa	Known RBP	4.9	□□□□□ -1.63
SPO7	YAL009W	FAR1	P21268	830 aa		4.9	□□□□□ -1.63
SPO7	YAL009W	REC114	P32841	428 aa		4.9	□□□□□ -1.63
SPO7	YAL009W	YOX1	P34161	385 aa		4.9	□□□□□ -1.63
SPO7	YAL009W	THI2	P38141	450 aa		4.9	□□□□□ -1.63
SPO7	YAL009W	TCM62	P38228	572 aa	Known RBP	4.9	□□□□□ -1.63
SPO7	YAL009W	PEX32	P38292	413 aa		4.9	□□□□□ -1.63
SPO7	YAL009W	EGD2	P38879	174 aa	Known RBP	4.9	□□□□□ -1.63
SPO7	YAL009W	MDM31	P38880	579 aa		4.9	□□□□□ -1.63
SPO7	YAL009W	SLM1	P40485	686 aa		4.9	□□□□□ -1.63
SPO7	YAL009W	PAM16	P42949	149 aa		4.9	□□□□□ -1.63
SPO7	YAL009W	ILM1	P47155	203 aa		4.9	□□□□□ -1.63
SPO7	YAL009W	CCC1	P47818	322 aa		4.9	□□□□□ -1.63
SPO7	YAL009W	SMM1	P53720	384 aa	Known RBP	4.9	□□□□□ -1.63
SPO7	YAL009W	DUG3	P53871	357 aa		4.9	□□□□□ -1.63
SPO7	YAL009W	RPL15B	P54780	204 aa	Predicted RBP	4.9	□□□□□ -1.63
SPO7	YAL009W	TLG1	Q03322	224 aa		4.9	□□□□□ -1.63
SPO7	YAL009W	ARP10	Q04549	284 aa		4.9	□□□□□ -1.63
SPO7	YAL009W	MSA1	Q08471	629 aa		4.9	□□□□□ -1.63
SPO7	YAL009W	TAF3	Q12297	353 aa		4.9	□□□□□ -1.63
SPO7	YAL009W	YLR415C	O13578	112 aa		4.89	□□□□□ -1.63
SPO7	YAL009W	NAM2	P11325	894 aa		4.89	□□□□□ -1.63
SPO7	YAL009W	RPL30	P14120	105 aa	Known RBP	4.89	□□□□□ -1.63
SPO7	YAL009W	IDP1	P21954	428 aa	Known RBP	4.89	□□□□□ -1.63
SPO7	YAL009W	APA2	P22108	325 aa		4.89	□□□□□ -1.63
SPO7	YAL009W	SDS22	P36047	338 aa		4.89	□□□□□ -1.63
SPO7	YAL009W	ARC40	P38328	384 aa	Known RBP	4.89	□□□□□ -1.63
SPO7	YAL009W	GZF3	P42944	551 aa	Known RBP	4.89	□□□□□ -1.63
SPO7	YAL009W	YIP4	P53093	235 aa		4.89	□□□□□ -1.63
SPO7	YAL009W	SLD3	P53135	668 aa		4.89	□□□□□ -1.63
SPO7	YAL009W	MTL1	P53214	551 aa		4.89	□□□□□ -1.63
SPO7	YAL009W	YNR048W	P53740	393 aa		4.89	□□□□□ -1.63
SPO7	YAL009W	AAH1	P53909	347 aa		4.89	□□□□□ -1.63
SPO7	YAL009W	YML122C	Q03207	126 aa		4.89	□□□□□ -1.63
SPO7	YAL009W	GAL83	Q04739	417 aa		4.89	□□□□□ -1.63
SPO7	YAL009W	YPR098C	Q06089	161 aa		4.89	□□□□□ -1.63
SPO7	YAL009W	YLR173W	Q06247	608 aa		4.89	□□□□□ -1.63
SPO7	YAL009W	GSH2	Q08220	491 aa		4.89	□□□□□ -1.63
SPO7	YAL009W	FRE3	Q08905	711 aa		4.89	□□□□□ -1.63
SPO7	YAL009W	FRE5	Q08908	694 aa		4.89	□□□□□ -1.63
SPO7	YAL009W	YGK3	Q12222	375 aa	Predicted RBP	4.89	□□□□□ -1.63
SPO7	YAL009W	YOR029W	Q12243	111 aa		4.89	□□□□□ -1.63
SPO7	YAL009W	SGA1	P08019	549 aa		4.88	□□□□□ -1.63
SPO7	YAL009W	SAG1	P20840	650 aa		4.88	□□□□□ -1.63
SPO7	YAL009W	ECM4	P36156	370 aa		4.88	□□□□□ -1.63
SPO7	YAL009W	RMD6	P39975	231 aa		4.88	□□□□□ -1.63
SPO7	YAL009W	YER188W	P40103	239 aa		4.88	□□□□□ -1.63
SPO7	YAL009W	DLS1	P40366	167 aa		4.88	□□□□□ -1.63
SPO7	YAL009W	FMC1	P40491	155 aa		4.88	□□□□□ -1.63
SPO7	YAL009W	LYS20	P48570	428 aa	Known RBP	4.88	□□□□□ -1.63
SPO7	YAL009W	VMA10	P48836	114 aa	Known RBP	4.88	□□□□□ -1.63
SPO7	YAL009W	YGL159W	P53110	370 aa		4.88	□□□□□ -1.63
SPO7	YAL009W	GEP7	P53171	287 aa		4.88	□□□□□ -1.63
SPO7	YAL009W	YNR064C	P53750	290 aa		4.88	□□□□□ -1.63
SPO7	YAL009W	NRK1	P53915	240 aa		4.88	□□□□□ -1.63
SPO7	YAL009W	YLR152C	P54072	576 aa		4.88	□□□□□ -1.63
SPO7	YAL009W	NRG1	Q03125	231 aa		4.88	□□□□□ -1.63
SPO7	YAL009W	PRM15	Q03262	622 aa		4.88	□□□□□ -1.63
SPO7	YAL009W	HLR1	Q04429	423 aa		4.88	□□□□□ -1.63
SPO7	YAL009W	YMR252C	Q04814	134 aa		4.88	□□□□□ -1.63
SPO7	YAL009W	YMR317W	Q04893	1140 aa		4.88	□□□□□ -1.63
SPO7	YAL009W	NMA1	Q06178	401 aa	Known RBP	4.88	□□□□□ -1.63
SPO7	YAL009W	LYS21	Q12122	440 aa	Known RBP	4.88	□□□□□ -1.63
SPO7	YAL009W	USB1	Q12208	290 aa	Known RBP	4.88	□□□□□ -1.63
SPO7	YAL009W	SIR2	P06700	562 aa		4.87	□□□□□ -1.63
SPO7	YAL009W	YGL041W-A	P0C5N3	154 aa		4.87	□□□□□ -1.63
SPO7	YAL009W	FUN26	P31381	517 aa		4.87	□□□□□ -1.63
SPO7	YAL009W	ZRT3	P34240	503 aa		4.87	□□□□□ -1.63
SPO7	YAL009W	SDS24	P38314	527 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 50.5 ms