RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 SNX27Q96L92 541 aa9.92□□□□□ -0.82
SCARB2-225ENST00000640900 FAM213AQ9BRX8 229 aa9.92□□□□□ -0.82
SCARB2-225ENST00000640900 ASB7Q9H672 318 aa9.92□□□□□ -0.82
SCARB2-225ENST00000640900 METTL14Q9HCE5 456 aaKnown RBP9.92□□□□□ -0.82
SCARB2-225ENST00000640900 PRDM5Q9NQX1 630 aaPredicted RBP9.92□□□□□ -0.82
SCARB2-225ENST00000640900 CNTN3Q9P232 1028 aa9.92□□□□□ -0.82
SCARB2-225ENST00000640900 FRMD4BQ9Y2L6 1034 aa9.92□□□□□ -0.82
SCARB2-225ENST00000640900 CITO14578 2027 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 GOLGA8IPA6NC78 632 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 GOLGA8JA6NMD2 632 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 MEIS3P2A8K0S8 358 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 ATMINO43313 823 aaPredicted RBP9.91□□□□□ -0.82
SCARB2-225ENST00000640900 EXOC3O60645 756 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 EFCAB14O75071 495 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 RECQL4O94761 1208 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 IL18RAPO95256 599 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 EPB41P11171 864 aaKnown RBP9.91□□□□□ -0.82
SCARB2-225ENST00000640900 ATP1A3P13637 1013 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 PRKCSHP14314 528 aaPredicted RBP9.91□□□□□ -0.82
SCARB2-225ENST00000640900 FPGSQ05932 587 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 IKBKEQ14164 716 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 KRT31Q15323 416 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 NAB2Q15742 525 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 SEZ6Q53EL9 994 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 SARM1Q6SZW1 724 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 INTS8Q75QN2 995 aaKnown RBP9.91□□□□□ -0.82
SCARB2-225ENST00000640900 CD302Q8IX05 232 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 CXorf38Q8TB03 319 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 RSPH1Q8WYR4 309 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 HERVK_113Q902F9 699 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 CNOT6LQ96LI5 555 aaKnown RBP9.91□□□□□ -0.82
SCARB2-225ENST00000640900 ACAP3Q96P50 834 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 TCHPQ9BT92 498 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 CXCL16Q9H2A7 254 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 RC3H2Q9HBD1 1191 aaKnown RBP9.91□□□□□ -0.82
SCARB2-225ENST00000640900 TMEM161AQ9NX61 479 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 SNTG2Q9NY99 539 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 ARMCX3Q9UH62 379 aaPredicted RBP9.91□□□□□ -0.82
SCARB2-225ENST00000640900 GIT1Q9Y2X7 761 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 DERAQ9Y315 318 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 C2CD2Q9Y426 696 aa9.91□□□□□ -0.82
SCARB2-225ENST00000640900 PDCD11Q14690 1871 aaKnown RBP9.9□□□□□ -0.82
SCARB2-225ENST00000640900 BECN2A8MW95 431 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 LACTBL1A8MY62 500 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 KCNJ18B7U540 433 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 AP5Z1O43299 807 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 OFD1O75665 1012 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 CXCL8P10145 99 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 GTF2H1P32780 548 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 VAMP7P51809 220 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 PPP2R3AQ06190 1150 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 SPAG1Q07617 926 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 BFSP1Q12934 665 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 KCNJ12Q14500 433 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 SURF1Q15526 300 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 CLLU1OSQ5K130 101 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 CEP135Q66GS9 1140 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 ASTLQ6HA08 431 aaPredicted RBP9.9□□□□□ -0.82
SCARB2-225ENST00000640900 DPY19L2P1Q6NXN4 242 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.9□□□□□ -0.82
SCARB2-225ENST00000640900 DEFB128Q7Z7B8 93 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 NT5DC4Q86YG4 428 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 FAM114A1Q8IWE2 563 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 EFCAB13Q8IY85 973 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 THNSL1Q8IYQ7 743 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 RNF214Q8ND24 703 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 ZNF516Q92618 1163 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 ZMAT2Q96NC0 199 aaKnown RBP9.9□□□□□ -0.82
SCARB2-225ENST00000640900 PPP1R10Q96QC0 940 aaKnown RBP9.9□□□□□ -0.82
SCARB2-225ENST00000640900 GDF15Q99988 308 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 CCDC94Q9BW85 323 aaPredicted RBP9.9□□□□□ -0.82
SCARB2-225ENST00000640900 RPF1Q9H9Y2 349 aaKnown RBP9.9□□□□□ -0.82
SCARB2-225ENST00000640900 PDE11AQ9HCR9 933 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 UBN1Q9NPG3 1134 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 INTS13Q9NVM9 706 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 RBAKQ9NYW8 714 aaPredicted RBP9.9□□□□□ -0.82
SCARB2-225ENST00000640900 PRKAG2Q9UGJ0 569 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 COQ4Q9Y3A0 265 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 HES2Q9Y543 173 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 NR2E3Q9Y5X4 410 aa9.9□□□□□ -0.82
SCARB2-225ENST00000640900 TRIP11Q15643 1979 aa9.9□□□□□ -0.83
SCARB2-225ENST00000640900 PTPRSQ13332 1948 aa9.9□□□□□ -0.83
SCARB2-225ENST00000640900 PTPRJQ12913 1337 aa9.89□□□□□ -0.83
SCARB2-225ENST00000640900 A0A1B0GTH6 734 aa9.89□□□□□ -0.83
SCARB2-225ENST00000640900 SMIM28A0A1B0GU29 152 aa9.89□□□□□ -0.83
SCARB2-225ENST00000640900 GTPBP10A4D1E9 387 aaKnown RBP9.89□□□□□ -0.83
SCARB2-225ENST00000640900 ARL5CA6NH57 179 aa9.89□□□□□ -0.83
SCARB2-225ENST00000640900 LRRIQ3A6PVS8 624 aaPredicted RBP9.89□□□□□ -0.83
SCARB2-225ENST00000640900 PTGESO14684 152 aa9.89□□□□□ -0.83
SCARB2-225ENST00000640900 C4BPAP04003 597 aaKnown RBP9.89□□□□□ -0.83
SCARB2-225ENST00000640900 ACRP10323 421 aa9.89□□□□□ -0.83
SCARB2-225ENST00000640900 AFF1P51825 1210 aaKnown RBP9.89□□□□□ -0.83
SCARB2-225ENST00000640900 AP3M2P53677 418 aa9.89□□□□□ -0.83
SCARB2-225ENST00000640900 WDR5P61964 334 aaKnown RBP9.89□□□□□ -0.83
SCARB2-225ENST00000640900 DLG4P78352 724 aa9.89□□□□□ -0.83
SCARB2-225ENST00000640900 PPP3CAQ08209 521 aa9.89□□□□□ -0.83
SCARB2-225ENST00000640900 NR1I3Q14994 352 aa9.89□□□□□ -0.83
SCARB2-225ENST00000640900 MAN2A1Q16706 1144 aa9.89□□□□□ -0.83
SCARB2-225ENST00000640900 ZACNQ401N2 412 aa9.89□□□□□ -0.83
SCARB2-225ENST00000640900 PSRC1Q6PGN9 363 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms