RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 CYP2C8P10632 490 aa5.91□□□□□ -1.46
CHD2-227ENST00000637572 ITGA4P13612 1032 aa5.91□□□□□ -1.46
CHD2-227ENST00000637572 SV2CQ496J9 727 aa5.91□□□□□ -1.46
CHD2-227ENST00000637572 CELF3Q5SZQ8 465 aaKnown RBP5.91□□□□□ -1.46
CHD2-227ENST00000637572 LGSNQ5TDP6 509 aa5.91□□□□□ -1.46
CHD2-227ENST00000637572 RSRC2Q7L4I2 434 aaKnown RBP5.91□□□□□ -1.46
CHD2-227ENST00000637572 TAOK1Q7L7X3 1001 aa5.91□□□□□ -1.46
CHD2-227ENST00000637572 HDXQ7Z353 690 aa5.91□□□□□ -1.46
CHD2-227ENST00000637572 PPP1R13BQ96KQ4 1090 aa5.91□□□□□ -1.46
CHD2-227ENST00000637572 NRBP1Q9UHY1 535 aa5.91□□□□□ -1.46
CHD2-227ENST00000637572 KIAA1257Q9ULG3 409 aa5.91□□□□□ -1.46
CHD2-227ENST00000637572 TTC28Q96AY4 2481 aa5.91□□□□□ -1.46
CHD2-227ENST00000637572 ABCA3Q99758 1704 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 EFCAB8A8MWE9 144 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 MYBP10242 640 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 ARL4AP40617 200 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 NPTX2P47972 431 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 DRAP1Q14919 205 aaPredicted RBP5.9□□□□□ -1.46
CHD2-227ENST00000637572 NR1I3Q14994 352 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 HYIQ5T013 277 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 PDXDC1Q6P996 788 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 MPZL3Q6UWV2 235 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 GPR142Q7Z601 462 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 RNF139Q8WU17 664 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 AFG1LQ8WV93 481 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 PPP2R3CQ969Q6 453 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 FAM149B1Q96BN6 582 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 SAAL1Q96ER3 474 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 DESI2Q9BSY9 194 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 RUSC1Q9BVN2 902 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 TMEM51Q9NW97 253 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 ADAM22Q9P0K1 906 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 ASIC3Q9UHC3 531 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 STAP1Q9ULZ2 295 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 TRAF3IP3Q9Y228 551 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 ITGB4P16144 1822 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 NUP98P52948 1817 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 A0A087WWV3 80 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 LRRC53A6NM62 1247 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 KRIT1O00522 736 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 COBLO75128 1261 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 SLC10A3P09131 477 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 CD58P19256 250 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 KLRC1P26715 233 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 ICAM3P32942 547 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 NLRP11P59045 1033 aaKnown RBP5.9□□□□□ -1.46
CHD2-227ENST00000637572 GRIN1Q05586 938 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 TMEM270Q6UE05 265 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 TLK2Q86UE8 772 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 ZNF507Q8TCN5 953 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 RSAD2Q8WXG1 361 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 TSPAN18Q96SJ8 248 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 PPP1R16BQ96T49 567 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 PRDM5Q9NQX1 630 aaPredicted RBP5.9□□□□□ -1.46
CHD2-227ENST00000637572 ADAMTS1Q9UHI8 967 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 SNCAIPQ9Y6H5 919 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 NRCAMQ92823 1304 aa5.9□□□□□ -1.46
CHD2-227ENST00000637572 NPHP3-ACAD11A0A0J9YXS1 232 aa5.9□□□□□ -1.47
CHD2-227ENST00000637572 MAPK13O15264 365 aa5.9□□□□□ -1.47
CHD2-227ENST00000637572 ZBTB24O43167 697 aaPredicted RBP5.9□□□□□ -1.47
CHD2-227ENST00000637572 MCF2P10911 925 aa5.9□□□□□ -1.47
CHD2-227ENST00000637572 PCSK1P29120 753 aa5.9□□□□□ -1.47
CHD2-227ENST00000637572 SARSP49591 514 aaKnown RBP5.9□□□□□ -1.47
CHD2-227ENST00000637572 BRD3Q15059 726 aa5.9□□□□□ -1.47
CHD2-227ENST00000637572 MAPRE1Q15691 268 aaKnown RBP5.9□□□□□ -1.47
CHD2-227ENST00000637572 SGO2Q562F6 1265 aa5.9□□□□□ -1.47
CHD2-227ENST00000637572 SCYL2Q6P3W7 929 aa5.9□□□□□ -1.47
CHD2-227ENST00000637572 PPP1R21Q6ZMI0 780 aa5.9□□□□□ -1.47
CHD2-227ENST00000637572 RUFY4Q6ZNE9 571 aa5.9□□□□□ -1.47
CHD2-227ENST00000637572 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.9□□□□□ -1.47
CHD2-227ENST00000637572 PRPF31Q8WWY3 499 aaKnown RBP5.9□□□□□ -1.47
CHD2-227ENST00000637572 TNFRSF25Q93038 417 aa5.9□□□□□ -1.47
CHD2-227ENST00000637572 CARD6Q9BX69 1037 aa5.9□□□□□ -1.47
CHD2-227ENST00000637572 DNAJC18Q9H819 358 aa5.9□□□□□ -1.47
CHD2-227ENST00000637572 ASNSD1Q9NWL6 643 aa5.9□□□□□ -1.47
CHD2-227ENST00000637572 COL1A2P08123 1366 aa5.9□□□□□ -1.47
CHD2-227ENST00000637572 TTC26A0AVF1 554 aa5.89□□□□□ -1.47
CHD2-227ENST00000637572 PGRMC1O00264 195 aaKnown RBP5.89□□□□□ -1.47
CHD2-227ENST00000637572 PRPSAP2O60256 369 aa5.89□□□□□ -1.47
CHD2-227ENST00000637572 GPR37L1O60883 481 aa5.89□□□□□ -1.47
CHD2-227ENST00000637572 UBA1P22314 1058 aaKnown RBP5.89□□□□□ -1.47
CHD2-227ENST00000637572 GNA15P30679 374 aa5.89□□□□□ -1.47
CHD2-227ENST00000637572 ATICP31939 592 aa5.89□□□□□ -1.47
CHD2-227ENST00000637572 MESDQ14696 234 aa5.89□□□□□ -1.47
CHD2-227ENST00000637572 COBLL1Q53SF7 1204 aa5.89□□□□□ -1.47
CHD2-227ENST00000637572 OR6B2Q6IFH4 312 aa5.89□□□□□ -1.47
CHD2-227ENST00000637572 MICALCLQ6ZW33 695 aa5.89□□□□□ -1.47
CHD2-227ENST00000637572 SH3RF1Q7Z6J0 888 aa5.89□□□□□ -1.47
CHD2-227ENST00000637572 TADA2BQ86TJ2 420 aa5.89□□□□□ -1.47
CHD2-227ENST00000637572 TTC13Q8NBP0 860 aa5.89□□□□□ -1.47
CHD2-227ENST00000637572 IFT81Q8WYA0 676 aa5.89□□□□□ -1.47
CHD2-227ENST00000637572 RBM41Q96IZ5 413 aaKnown RBP5.89□□□□□ -1.47
CHD2-227ENST00000637572 THSD7AQ9UPZ6 1657 aa5.89□□□□□ -1.47
CHD2-227ENST00000637572 CCDC188H7C350 402 aa5.89□□□□□ -1.47
CHD2-227ENST00000637572 CNTN2Q02246 1040 aa5.89□□□□□ -1.47
CHD2-227ENST00000637572 FMR1Q06787 632 aaKnown RBP eCLIP5.89□□□□□ -1.47
CHD2-227ENST00000637572 GOLGA8FQ08AF8 430 aa5.89□□□□□ -1.47
CHD2-227ENST00000637572 GOLGA8DPQ0D2H9 430 aa5.89□□□□□ -1.47
CHD2-227ENST00000637572 ELMOD1Q8N336 334 aa5.89□□□□□ -1.47
CHD2-227ENST00000637572 MYRIPQ8NFW9 859 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms