RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 TCHPQ9BT92 498 aa10.73□□□□□ -0.69
SOX2-OT-249ENST00000628810 MKNK1Q9BUB5 465 aa10.73□□□□□ -0.69
SOX2-OT-249ENST00000628810 ADAM33Q9BZ11 813 aa10.73□□□□□ -0.69
SOX2-OT-249ENST00000628810 NAT10Q9H0A0 1025 aaKnown RBP10.73□□□□□ -0.69
SOX2-OT-249ENST00000628810 DNAJC25Q9H1X3 360 aa10.73□□□□□ -0.69
SOX2-OT-249ENST00000628810 MTIF3Q9H2K0 278 aaKnown RBP10.73□□□□□ -0.69
SOX2-OT-249ENST00000628810 PRO3102Q9H379 93 aa10.73□□□□□ -0.69
SOX2-OT-249ENST00000628810 RC3H2Q9HBD1 1191 aaKnown RBP10.73□□□□□ -0.69
SOX2-OT-249ENST00000628810 CPSF3Q9UKF6 684 aaKnown RBP10.73□□□□□ -0.69
SOX2-OT-249ENST00000628810 GIT1Q9Y2X7 761 aa10.73□□□□□ -0.69
SOX2-OT-249ENST00000628810 CLIC2O15247 247 aa10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 MEFVO15553 781 aaPredicted RBP10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 RECQL4O94761 1208 aa10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 AMHP03971 560 aa10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 STAG3L1P0CL83 205 aa10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 KCNJ6P48051 423 aa10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 DEFB103AP81534 67 aa10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 ENOX2Q16206 610 aaKnown RBP10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 SNRNP35Q16560 246 aaKnown RBP10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 XKR4Q5GH76 650 aa10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 ZBTB41Q5SVQ8 909 aa10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 ALKAL1Q6UXT8 129 aa10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 AGMOQ6ZNB7 445 aa10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 BRSK2Q8IWQ3 736 aa10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 TMEM192Q8IY95 271 aa10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 ZSWIM2Q8NEG5 633 aa10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 PHOSPHO2Q8TCD6 241 aa10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 TOP1MTQ969P6 601 aa10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 SNX27Q96L92 541 aa10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 SLC9A7Q96T83 725 aa10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 CCDC94Q9BW85 323 aaPredicted RBP10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 PCIF1Q9H4Z3 704 aa10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 UBN1Q9NPG3 1134 aa10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 TOPORSQ9NS56 1045 aaPredicted RBP10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 RNF19AQ9NV58 838 aa10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 CNTN3Q9P232 1028 aa10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 HES2Q9Y543 173 aa10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 TTC3P53804 2025 aa10.72□□□□□ -0.69
SOX2-OT-249ENST00000628810 TTC26A0AVF1 554 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 MEIS3P2A8K0S8 358 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 IKBKBO14920 756 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 CETN3O15182 167 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 HOXA2O43364 376 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 EXOC3O60645 756 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 AKAP3O75969 853 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 HARSP12081 509 aaKnown RBP10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 ITGA4P13612 1032 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 TNFSF9P41273 254 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 MATR3P43243 847 aaKnown RBP eCLIP10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 ACOT2P49753 483 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 CYP2J2P51589 502 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 MARSP56192 900 aaKnown RBP10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 STX17P56962 302 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 MYL5Q02045 173 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 ADAM9Q13443 819 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 NCAPHQ15003 741 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 C9orf50Q5SZB4 431 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 SPATA1Q5VX52 437 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 CBWD2Q8IUF1 395 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 CD302Q8IX05 232 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 THNSL1Q8IYQ7 743 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 CSGALNACT2Q8N6G5 542 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 NOC3LQ8WTT2 800 aaKnown RBP10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 ZNF689Q96CS4 500 aaPredicted RBP10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 SAAL1Q96ER3 474 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 BORCS6Q96GS4 357 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 MFSD14AQ96MC6 490 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 TSPAN18Q96SJ8 248 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 FAM213AQ9BRX8 229 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 GZF1Q9H116 711 aaPredicted RBP10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 RSAD1Q9HA92 442 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 PLEKHA5Q9HAU0 1116 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 SNTG2Q9NY99 539 aa10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 CXXC1Q9P0U4 656 aaPredicted RBP10.71□□□□□ -0.69
SOX2-OT-249ENST00000628810 ANK1P16157 1881 aa10.7□□□□□ -0.7
SOX2-OT-249ENST00000628810 PDCD11Q14690 1871 aaKnown RBP10.7□□□□□ -0.7
SOX2-OT-249ENST00000628810 ZNF233A6NK53 670 aa10.7□□□□□ -0.7
SOX2-OT-249ENST00000628810 DGKIO75912 1065 aa10.7□□□□□ -0.7
SOX2-OT-249ENST00000628810 IL18RAPO95256 599 aa10.7□□□□□ -0.7
SOX2-OT-249ENST00000628810 GJB5O95377 273 aa10.7□□□□□ -0.7
SOX2-OT-249ENST00000628810 FGFR1OPO95684 399 aaKnown RBP10.7□□□□□ -0.7
SOX2-OT-249ENST00000628810 GNA14O95837 355 aa10.7□□□□□ -0.7
SOX2-OT-249ENST00000628810 CXCL8P10145 99 aa10.7□□□□□ -0.7
SOX2-OT-249ENST00000628810 KCNE1P15382 129 aa10.7□□□□□ -0.7
SOX2-OT-249ENST00000628810 AKAP5P24588 427 aa10.7□□□□□ -0.7
SOX2-OT-249ENST00000628810 PSMC2P35998 433 aaKnown RBP10.7□□□□□ -0.7
SOX2-OT-249ENST00000628810 CASP4P49662 377 aa10.7□□□□□ -0.7
SOX2-OT-249ENST00000628810 ZNF165P49910 485 aa10.7□□□□□ -0.7
SOX2-OT-249ENST00000628810 YARSP54577 528 aaKnown RBP10.7□□□□□ -0.7
SOX2-OT-249ENST00000628810 CLDN10P78369 228 aa10.7□□□□□ -0.7
SOX2-OT-249ENST00000628810 HTRA4P83105 476 aaPredicted RBP10.7□□□□□ -0.7
SOX2-OT-249ENST00000628810 CYP24A1Q07973 514 aa10.7□□□□□ -0.7
SOX2-OT-249ENST00000628810 PSMD6Q15008 389 aa10.7□□□□□ -0.7
SOX2-OT-249ENST00000628810 IQCB1Q15051 598 aa10.7□□□□□ -0.7
SOX2-OT-249ENST00000628810 SLC10A6Q3KNW5 377 aa10.7□□□□□ -0.7
SOX2-OT-249ENST00000628810 SEZ6Q53EL9 994 aa10.7□□□□□ -0.7
SOX2-OT-249ENST00000628810 CLLU1OSQ5K130 101 aa10.7□□□□□ -0.7
SOX2-OT-249ENST00000628810 INTS8Q75QN2 995 aaKnown RBP10.7□□□□□ -0.7
SOX2-OT-249ENST00000628810 FILIP1Q7Z7B0 1213 aa10.7□□□□□ -0.7
SOX2-OT-249ENST00000628810 IRF2BP1Q8IU81 584 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms