RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 CBFA2T3O75081 653 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 PDE5AO76074 875 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 LDHAP00338 332 aaKnown RBP11.04□□□□□ -0.64
VPS11-207ENST00000620429 SLC1A4P43007 532 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 ARFIP2P53365 341 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 RAB15P59190 212 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 RNASE9P60153 205 aaKnown RBP11.04□□□□□ -0.64
VPS11-207ENST00000620429 PSMC1P62191 440 aaKnown RBP11.04□□□□□ -0.64
VPS11-207ENST00000620429 GRM2Q14416 872 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 TDRD12Q587J7 1177 aaKnown RBP11.04□□□□□ -0.64
VPS11-207ENST00000620429 PACS1Q6VY07 963 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 PASD1Q8IV76 773 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 SREK1Q8WXA9 508 aaKnown RBP11.04□□□□□ -0.64
VPS11-207ENST00000620429 TAF4BQ92750 862 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 ATP6V0A1Q93050 837 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 ERP27Q96DN0 273 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 CLIP3Q96DZ5 547 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 DYDC2Q96IM9 177 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 DNAJC1Q96KC8 554 aaKnown RBP11.04□□□□□ -0.64
VPS11-207ENST00000620429 OSBPL10Q9BXB5 764 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 CUEDC2Q9H467 287 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 NLRC4Q9NPP4 1024 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 TTLL3Q9Y4R7 772 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 TNRC6CQ9HCJ0 1690 aaKnown RBP11.04□□□□□ -0.64
VPS11-207ENST00000620429 TLDC2A0PJX2 215 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 HSPA6P17066 643 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 NEK3P51956 506 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 EHHADHQ08426 723 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 KCNMA1Q12791 1236 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 KIF22Q14807 665 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 LRRC8BQ6P9F7 803 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 ACAD11Q709F0 780 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 TMC4Q7Z404 712 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 DZIP1Q86YF9 867 aaKnown RBP11.04□□□□□ -0.64
VPS11-207ENST00000620429 CROCCP3Q8IVE0 287 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 BRIP1Q9BX63 1249 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 SEMA6BQ9H3T3 888 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 SYNCQ9H7C4 482 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 TCP11L1Q9NUJ3 509 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 CHKBQ9Y259 395 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 STXBP5LQ9Y2K9 1186 aa11.04□□□□□ -0.64
VPS11-207ENST00000620429 UTP11Q9Y3A2 253 aaKnown RBP11.04□□□□□ -0.64
VPS11-207ENST00000620429 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.03□□□□□ -0.64
VPS11-207ENST00000620429 POTEFA5A3E0 1075 aa11.03□□□□□ -0.64
VPS11-207ENST00000620429 KRT36O76013 467 aa11.03□□□□□ -0.64
VPS11-207ENST00000620429 POTEIP0CG38 1075 aa11.03□□□□□ -0.64
VPS11-207ENST00000620429 YBX3P16989 372 aaKnown RBP eCLIP11.03□□□□□ -0.64
VPS11-207ENST00000620429 TGFB2P61812 414 aa11.03□□□□□ -0.64
VPS11-207ENST00000620429 ACSBG2Q5FVE4 666 aa11.03□□□□□ -0.64
VPS11-207ENST00000620429 POTEEQ6S8J3 1075 aa11.03□□□□□ -0.64
VPS11-207ENST00000620429 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.03□□□□□ -0.64
VPS11-207ENST00000620429 ANKK1Q8NFD2 765 aa11.03□□□□□ -0.64
VPS11-207ENST00000620429 NLGN2Q8NFZ4 835 aa11.03□□□□□ -0.64
VPS11-207ENST00000620429 LRRC37BQ96QE4 947 aa11.03□□□□□ -0.64
VPS11-207ENST00000620429 ANKRD2Q9GZV1 360 aa11.03□□□□□ -0.64
VPS11-207ENST00000620429 DCP1AQ9NPI6 582 aaPredicted RBP11.03□□□□□ -0.64
VPS11-207ENST00000620429 QPCTLQ9NXS2 382 aa11.03□□□□□ -0.64
VPS11-207ENST00000620429 CLIC5Q9NZA1 410 aa11.03□□□□□ -0.64
VPS11-207ENST00000620429 TIMM22Q9Y584 194 aa11.03□□□□□ -0.64
VPS11-207ENST00000620429 IRS2Q9Y4H2 1338 aa11.03□□□□□ -0.64
VPS11-207ENST00000620429 PGRMC1O00264 195 aaKnown RBP11.03□□□□□ -0.64
VPS11-207ENST00000620429 MAPK13O15264 365 aa11.03□□□□□ -0.64
VPS11-207ENST00000620429 DCTN3O75935 186 aa11.03□□□□□ -0.64
VPS11-207ENST00000620429 PCP11498 1178 aaKnown RBP11.03□□□□□ -0.64
VPS11-207ENST00000620429 PPP1R2P41236 205 aa11.03□□□□□ -0.64
VPS11-207ENST00000620429 GRIA2P42262 883 aa11.03□□□□□ -0.64
VPS11-207ENST00000620429 DSG1Q02413 1049 aa11.03□□□□□ -0.64
VPS11-207ENST00000620429 RELAQ04206 551 aa11.03□□□□□ -0.64
VPS11-207ENST00000620429 AUHQ13825 339 aaKnown RBP11.03□□□□□ -0.64
VPS11-207ENST00000620429 CCDC84Q86UT8 332 aaPredicted RBP11.03□□□□□ -0.64
VPS11-207ENST00000620429 CASP10Q92851 521 aa11.03□□□□□ -0.64
VPS11-207ENST00000620429 MAGEB18Q96M61 343 aa11.03□□□□□ -0.64
VPS11-207ENST00000620429 DDX47Q9H0S4 455 aaKnown RBP11.03□□□□□ -0.64
VPS11-207ENST00000620429 METTL5Q9NRN9 209 aaKnown RBP11.03□□□□□ -0.64
VPS11-207ENST00000620429 USP40Q9NVE5 1235 aa11.03□□□□□ -0.64
VPS11-207ENST00000620429 RASAL2Q9UJF2 1139 aa11.03□□□□□ -0.64
VPS11-207ENST00000620429 FRMD4BQ9Y2L6 1034 aa11.03□□□□□ -0.64
VPS11-207ENST00000620429 DDX3XO00571 662 aaKnown RBP eCLIP11.02□□□□□ -0.64
VPS11-207ENST00000620429 VILLO15195 856 aa11.02□□□□□ -0.64
VPS11-207ENST00000620429 CRABP2P29373 138 aa11.02□□□□□ -0.64
VPS11-207ENST00000620429 HNRNPDQ14103 355 aaKnown RBP11.02□□□□□ -0.64
VPS11-207ENST00000620429 MAN2A1Q16706 1144 aa11.02□□□□□ -0.64
VPS11-207ENST00000620429 SYCP2LQ5T4T6 812 aa11.02□□□□□ -0.64
VPS11-207ENST00000620429 CNNM4Q6P4Q7 775 aa11.02□□□□□ -0.64
VPS11-207ENST00000620429 PATL1Q86TB9 770 aaKnown RBP11.02□□□□□ -0.64
VPS11-207ENST00000620429 FAM133AQ8N9E0 248 aa11.02□□□□□ -0.64
VPS11-207ENST00000620429 KIAA0895Q8NCT3 520 aa11.02□□□□□ -0.64
VPS11-207ENST00000620429 GDAP1Q8TB36 358 aa11.02□□□□□ -0.64
VPS11-207ENST00000620429 C7orf25Q9BPX7 421 aa11.02□□□□□ -0.64
VPS11-207ENST00000620429 MAGEF1Q9HAY2 307 aa11.02□□□□□ -0.64
VPS11-207ENST00000620429 GPBP1L1Q9HC44 474 aaPredicted RBP11.02□□□□□ -0.64
VPS11-207ENST00000620429 ZDHHC18Q9NUE0 388 aa11.02□□□□□ -0.64
VPS11-207ENST00000620429 PCDHA6Q9UN73 950 aa11.02□□□□□ -0.64
VPS11-207ENST00000620429 ITM2BQ9Y287 266 aa11.02□□□□□ -0.64
VPS11-207ENST00000620429 PCDHA8Q9Y5H6 950 aa11.02□□□□□ -0.64
VPS11-207ENST00000620429 MYH4Q9Y623 1939 aa11.02□□□□□ -0.64
VPS11-207ENST00000620429 TSPY2A6NKD2 308 aa11.02□□□□□ -0.65
VPS11-207ENST00000620429 KCNK3O14649 394 aa11.02□□□□□ -0.65
VPS11-207ENST00000620429 RNASEH1O60930 286 aaKnown RBP11.02□□□□□ -0.65
VPS11-207ENST00000620429 FGRP09769 529 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms