RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-222ENST00000617185 DGCR14Q96DF8 476 aaKnown RBP12.32□□□□□ -0.44
TP53-222ENST00000617185 PITPNM2Q9BZ72 1349 aa12.32□□□□□ -0.44
TP53-222ENST00000617185 PCP11498 1178 aaKnown RBP12.32□□□□□ -0.44
TP53-222ENST00000617185 SERPINB8P50452 374 aa12.32□□□□□ -0.44
TP53-222ENST00000617185 PLTPP55058 493 aa12.32□□□□□ -0.44
TP53-222ENST00000617185 PPP4CP60510 307 aa12.32□□□□□ -0.44
TP53-222ENST00000617185 PPP2R5BQ15173 497 aa12.32□□□□□ -0.44
TP53-222ENST00000617185 PPP2R5EQ16537 467 aa12.32□□□□□ -0.44
TP53-222ENST00000617185 ACSBG2Q5FVE4 666 aa12.32□□□□□ -0.44
TP53-222ENST00000617185 VSTM1Q6UX27 236 aa12.32□□□□□ -0.44
TP53-222ENST00000617185 NANOGNBQ7Z5D8 188 aa12.32□□□□□ -0.44
TP53-222ENST00000617185 DGKHQ86XP1 1220 aa12.32□□□□□ -0.44
TP53-222ENST00000617185 SYN2Q92777 582 aaPredicted RBP12.32□□□□□ -0.44
TP53-222ENST00000617185 TMEM60Q9H2L4 133 aa12.32□□□□□ -0.44
TP53-222ENST00000617185 SEMA4AQ9H3S1 761 aa12.32□□□□□ -0.44
TP53-222ENST00000617185 GPCPD1Q9NPB8 672 aa12.32□□□□□ -0.44
TP53-222ENST00000617185 KCNK9Q9NPC2 374 aa12.32□□□□□ -0.44
TP53-222ENST00000617185 DDX3XO00571 662 aaKnown RBP eCLIP12.31□□□□□ -0.442e-6■■■■■ 27.3
TP53-222ENST00000617185 KLRC4O43908 158 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 AKR1B1P15121 316 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 PPP1R2P41236 205 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 GALK1P51570 392 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 DSG1Q02413 1049 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 RFWD3Q6PCD5 774 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 DSTYKQ6XUX3 929 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 B3GNT6Q6ZMB0 384 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 DEPTORQ8TB45 409 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 DQX1Q8TE96 717 aaKnown RBP12.31□□□□□ -0.44
TP53-222ENST00000617185 PIGSQ96S52 555 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 PDGFDQ9GZP0 370 aaPredicted RBP12.31□□□□□ -0.44
TP53-222ENST00000617185 CROTQ9UKG9 612 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 STARD13Q9Y3M8 1113 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 RPTORQ8N122 1335 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 POTEFA5A3E0 1075 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 POTEIP0CG38 1075 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 PYGMP11217 842 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 TXKP42681 527 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 NEK3P51956 506 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 DRG2P55039 364 aaKnown RBP12.31□□□□□ -0.44
TP53-222ENST00000617185 KCTD19Q17RG1 926 aaPredicted RBP12.31□□□□□ -0.44
TP53-222ENST00000617185 THOC7Q6I9Y2 204 aaKnown RBP12.31□□□□□ -0.44
TP53-222ENST00000617185 POTEEQ6S8J3 1075 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 ARHGEF18Q6ZSZ5 1173 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 MYOCDQ8IZQ8 938 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 UHMK1Q8TAS1 419 aaKnown RBP12.31□□□□□ -0.44
TP53-222ENST00000617185 COA7Q96BR5 231 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 DNAJC1Q96KC8 554 aaKnown RBP12.31□□□□□ -0.44
TP53-222ENST00000617185 NT5C3AQ9H0P0 336 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 MLXIPLQ9NP71 852 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 CLIC5Q9NZA1 410 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 SNED1Q8TER0 1413 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 CCDC194A0A1B0GVG4 234 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 FAM187AA6NFU0 413 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 OPHN1O60890 802 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 CBX6O95503 412 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 ZBTB48P10074 688 aaPredicted RBP12.31□□□□□ -0.44
TP53-222ENST00000617185 SLC16A2P36021 539 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 NAPAP54920 295 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 DR1Q01658 176 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 MYBPC2Q14324 1141 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 GRM4Q14833 912 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 MAN2A1Q16706 1144 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 LETM2Q2VYF4 491 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 FAM133AQ8N9E0 248 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 FBXO25Q8TCJ0 367 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 DTX3LQ8TDB6 740 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 FAIMQ9NVQ4 179 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 TMEM260Q9NX78 707 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 MTRF1LQ9UGC7 380 aaKnown RBP12.31□□□□□ -0.44
TP53-222ENST00000617185 ANGPTL2Q9UKU9 493 aa12.31□□□□□ -0.44
TP53-222ENST00000617185 LAMB1P07942 1786 aa12.3□□□□□ -0.44
TP53-222ENST00000617185 BOLA2-SMG1P6H3BVE0 249 aa12.3□□□□□ -0.44
TP53-222ENST00000617185 LSM1O15116 133 aaKnown RBP12.3□□□□□ -0.44
TP53-222ENST00000617185 RIPK2O43353 540 aa12.3□□□□□ -0.44
TP53-222ENST00000617185 CDK4P11802 303 aa12.3□□□□□ -0.44
TP53-222ENST00000617185 HOXA10P31260 410 aaPredicted RBP12.3□□□□□ -0.44
TP53-222ENST00000617185 GEMIN4P57678 1058 aaKnown RBP12.3□□□□□ -0.44
TP53-222ENST00000617185 C16orf86Q6ZW13 317 aa12.3□□□□□ -0.44
TP53-222ENST00000617185 OTUD6AQ7L8S5 288 aa12.3□□□□□ -0.44
TP53-222ENST00000617185 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.3□□□□□ -0.44
TP53-222ENST00000617185 PCDHA6Q9UN73 950 aa12.3□□□□□ -0.44
TP53-222ENST00000617185 ATP6V0A2Q9Y487 856 aa12.3□□□□□ -0.44
TP53-222ENST00000617185 PCDHA8Q9Y5H6 950 aa12.3□□□□□ -0.44
TP53-222ENST00000617185 MAGEB3O15480 346 aa12.3□□□□□ -0.44
TP53-222ENST00000617185 KRT38O76015 456 aa12.3□□□□□ -0.44
TP53-222ENST00000617185 EMP3P54852 163 aa12.3□□□□□ -0.44
TP53-222ENST00000617185 PTENP60484 403 aa12.3□□□□□ -0.44
TP53-222ENST00000617185 MAP3K10Q02779 954 aa12.3□□□□□ -0.44
TP53-222ENST00000617185 STRN3Q13033 797 aa12.3□□□□□ -0.44
TP53-222ENST00000617185 LRRC57Q8N9N7 239 aa12.3□□□□□ -0.44
TP53-222ENST00000617185 GAB3Q8WWW8 586 aa12.3□□□□□ -0.44
TP53-222ENST00000617185 GJA10Q969M2 543 aa12.3□□□□□ -0.44
TP53-222ENST00000617185 RUNDC3BQ96NL0 473 aa12.3□□□□□ -0.44
TP53-222ENST00000617185 CRAMP1Q96RY5 1269 aa12.3□□□□□ -0.44
TP53-222ENST00000617185 ECSITQ9BQ95 431 aa12.3□□□□□ -0.44
TP53-222ENST00000617185 PACSIN1Q9BY11 444 aa12.3□□□□□ -0.44
TP53-222ENST00000617185 SAR1AQ9NR31 198 aa12.3□□□□□ -0.44
TP53-222ENST00000617185 A0A087X0T9 212 aa12.29□□□□□ -0.44
TP53-222ENST00000617185 NKRFO15226 690 aaKnown RBP eCLIP12.29□□□□□ -0.44
TP53-222ENST00000617185 GH1P01241 217 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms