RNA–Protein interactions for RNA: ENST00000613296.4

ALMS1-206, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,925 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-206ENST00000613296 DCTN2Q13561 401 aaKnown RBP8.8□□□□□ -1
ALMS1-206ENST00000613296 ZNF699Q32M78 642 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 ZNF394Q53GI3 561 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 THOC7Q6I9Y2 204 aaKnown RBP8.8□□□□□ -1
ALMS1-206ENST00000613296 NFATC2IPQ8NCF5 419 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 PNMA1Q8ND90 353 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 HNMTP50135 292 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 SPATA21Q7Z572 469 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 FAM89AQ96GI7 184 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 DLGAP2Q9P1A6 1054 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 MICAL3Q7RTP6 2002 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 KAT6AQ92794 2004 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 MYL2P10916 166 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 PDAP1Q13442 181 aaKnown RBP8.8□□□□□ -1
ALMS1-206ENST00000613296 PLA2G4AP47712 749 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 EIF2B5Q13144 721 aaKnown RBP8.8□□□□□ -1
ALMS1-206ENST00000613296 DDX53Q86TM3 631 aaKnown RBP8.8□□□□□ -1
ALMS1-206ENST00000613296 AGGF1Q8N302 714 aaeCLIP8.8□□□□□ -1
ALMS1-206ENST00000613296 STK39Q9UEW8 545 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 PKP3Q9Y446 797 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 CYP27A1Q02318 531 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 PTPN12Q05209 780 aaKnown RBP8.8□□□□□ -1
ALMS1-206ENST00000613296 KIAA0408Q6ZU52 694 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 BATF3Q9NR55 127 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 ADD3Q9UEY8 706 aaKnown RBP8.8□□□□□ -1
ALMS1-206ENST00000613296 NRBP1Q9UHY1 535 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.8□□□□□ -1
ALMS1-206ENST00000613296 MRPS25P82663 173 aaKnown RBP8.8□□□□□ -1
ALMS1-206ENST00000613296 ARHGEF6Q15052 776 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 GSTA3Q16772 222 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 ABRAXAS1Q6UWZ7 409 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 C11orf96Q7Z7L8 435 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 SCN4BQ8IWT1 228 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 CLMNQ96JQ2 1002 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 PANX2Q96RD6 677 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 SLC9A7Q96T83 725 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 PRRG3Q9BZD7 231 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 TRABDQ9H4I3 376 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 A0A0B4J269 797 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 MYBL1P10243 752 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 TUBB3Q13509 450 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 AKAP4Q5JQC9 854 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 ZBTB10Q96DT7 871 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 APOL5Q9BWW9 433 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 CEP44Q9C0F1 390 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 MRGBPQ9NV56 204 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 UBA2Q9UBT2 640 aaPredicted RBP8.8□□□□□ -1
ALMS1-206ENST00000613296 FAM47E-STBD1D6RA91 191 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 SDC4P31431 198 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 SURF1Q15526 300 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 SIX5Q8N196 739 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 CEP170P1Q96L14 293 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 LBHD1Q9BQE6 289 aaPredicted RBP8.8□□□□□ -1
ALMS1-206ENST00000613296 ROGDIQ9GZN7 287 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 CXorf56Q9H5V9 222 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 ABCC4O15439 1325 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 SSH2Q76I76 1423 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 PRIM2P49643 509 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 PKN2Q16513 984 aaKnown RBP8.8□□□□□ -1
ALMS1-206ENST00000613296 ZNF57Q68EA5 555 aaPredicted RBP8.8□□□□□ -1
ALMS1-206ENST00000613296 TRIM65Q6PJ69 517 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 THEM5Q8N1Q8 247 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 MIER2Q8N344 545 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 GPR101Q96P66 508 aaPredicted RBP8.8□□□□□ -1
ALMS1-206ENST00000613296 KCNK16Q96T55 309 aa8.8□□□□□ -1
ALMS1-206ENST00000613296 SMAPO00193 183 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 AIM2O14862 343 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 SGSM2O43147 1006 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 PPIP5K2O43314 1243 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 KCNQ4P56696 695 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 MAPK11Q15759 364 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 ME3Q16798 604 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 GSPT2Q8IYD1 628 aaKnown RBP8.79□□□□□ -1
ALMS1-206ENST00000613296 SH3TC2Q8TF17 1288 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 SLC25A13Q9UJS0 675 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 URB1O60287 2271 aaKnown RBP8.79□□□□□ -1
ALMS1-206ENST00000613296 TRPM2O94759 1503 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 KLRF2D3W0D1 207 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 NFICP08651 508 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 HIST1H2AGP0C0S8 130 aaPredicted RBP8.79□□□□□ -1
ALMS1-206ENST00000613296 HIST1H2ADP20671 130 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 HIST1H2AHQ96KK5 128 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 HIST1H2AJQ99878 128 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 H2AFJQ9BTM1 129 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 PCDHB8Q9UN66 801 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 SNX24Q9Y343 169 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 SF3B1O75533 1304 aaKnown RBP eCLIP8.79□□□□□ -18e-6■■■■■ 107
ALMS1-206ENST00000613296 ALDH1A2O94788 518 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 GSTM1P09488 218 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 CHI3L1P36222 383 aaPredicted RBP8.79□□□□□ -1
ALMS1-206ENST00000613296 SGO1Q5FBB7 561 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 CDKL3Q8IVW4 592 aaPredicted RBP8.79□□□□□ -1
ALMS1-206ENST00000613296 KBTBD3Q8NAB2 608 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 LPIN2Q92539 896 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 GRAMD1AQ96CP6 724 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 SEC16BQ96JE7 1060 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 THAP9Q9H5L6 903 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 APPL1Q9UKG1 709 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 CARMIL3Q8ND23 1372 aa8.79□□□□□ -1
ALMS1-206ENST00000613296 ATAD2BQ9ULI0 1458 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms