RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 TIPINQ9BVW5 301 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 WNT8AQ9H1J5 351 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.26□□□□□ -0.29
CDCA3-212ENST00000604599 ANAPC5Q9UJX4 755 aa13.26□□□□□ -0.29
CDCA3-212ENST00000604599 MAGEA13PA6NCF6 341 aa13.25□□□□□ -0.29
CDCA3-212ENST00000604599 TRAFD1O14545 582 aaPredicted RBP13.25□□□□□ -0.29
CDCA3-212ENST00000604599 PPP1R11O60927 126 aaPredicted RBP13.25□□□□□ -0.29
CDCA3-212ENST00000604599 ATF2P15336 505 aa13.25□□□□□ -0.29
CDCA3-212ENST00000604599 ADRA2BP18089 450 aa13.25□□□□□ -0.29
CDCA3-212ENST00000604599 IVDP26440 423 aa13.25□□□□□ -0.29
CDCA3-212ENST00000604599 CYP2J2P51589 502 aa13.25□□□□□ -0.29
CDCA3-212ENST00000604599 SPARCL1Q14515 664 aa13.25□□□□□ -0.29
CDCA3-212ENST00000604599 PHLDB3Q6NSJ2 640 aa13.25□□□□□ -0.29
CDCA3-212ENST00000604599 RFX8Q6ZV50 586 aa13.25□□□□□ -0.29
CDCA3-212ENST00000604599 CLNKQ7Z7G1 428 aa13.25□□□□□ -0.29
CDCA3-212ENST00000604599 TRIM74Q86UV6 250 aa13.25□□□□□ -0.29
CDCA3-212ENST00000604599 TRIM73Q86UV7 250 aa13.25□□□□□ -0.29
CDCA3-212ENST00000604599 KBTBD2Q8IY47 623 aa13.25□□□□□ -0.29
CDCA3-212ENST00000604599 SH3TC2Q8TF17 1288 aa13.25□□□□□ -0.29
CDCA3-212ENST00000604599 NDNQ99608 321 aa13.25□□□□□ -0.29
CDCA3-212ENST00000604599 FAM118BQ9BPY3 351 aa13.25□□□□□ -0.29
CDCA3-212ENST00000604599 LRRC19Q9H756 370 aa13.25□□□□□ -0.29
CDCA3-212ENST00000604599 SUGT1Q9Y2Z0 365 aa13.25□□□□□ -0.29
CDCA3-212ENST00000604599 TULP1O00294 542 aaPredicted RBP13.25□□□□□ -0.29
CDCA3-212ENST00000604599 POLD1P28340 1107 aa13.25□□□□□ -0.29
CDCA3-212ENST00000604599 PSMC2P35998 433 aaKnown RBP13.25□□□□□ -0.29
CDCA3-212ENST00000604599 HADHBP55084 474 aaKnown RBP13.25□□□□□ -0.29
CDCA3-212ENST00000604599 GRIK5Q16478 980 aa13.25□□□□□ -0.29
CDCA3-212ENST00000604599 CAPN12Q6ZSI9 719 aa13.25□□□□□ -0.29
CDCA3-212ENST00000604599 RDH13Q8NBN7 331 aa13.25□□□□□ -0.29
CDCA3-212ENST00000604599 NEDD1Q8NHV4 660 aa13.25□□□□□ -0.29
CDCA3-212ENST00000604599 GATA6Q92908 595 aa13.25□□□□□ -0.29
CDCA3-212ENST00000604599 CD101Q93033 1021 aa13.25□□□□□ -0.29
CDCA3-212ENST00000604599 CFAP69A5D8W1 941 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 USP17L15C9J2P7 530 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 USP17L13C9JLJ4 530 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 USP17L11C9JVI0 530 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 USP17L18D6R9N7 530 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 USP17L22D6RA61 530 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 USP17L17D6RBQ6 530 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 USP17L19D6RCP7 530 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 USP17L20D6RJB6 530 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 POC1B-GALNT4F8VUJ3 575 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 hCG_1984214I3L0E3 225 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 MAGEB2O15479 319 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 EXOC3O60645 756 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 TBCAO75347 108 aaKnown RBP13.24□□□□□ -0.29
CDCA3-212ENST00000604599 TCEA3O75764 348 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 FGFR1P11362 822 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 CA4P22748 312 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 RPA3P35244 121 aaPredicted RBP13.24□□□□□ -0.29
CDCA3-212ENST00000604599 NEK3P51956 506 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 SLC34A1Q06495 639 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 USP17L24Q0WX57 530 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 OVGP1Q12889 678 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 USP17L6PQ6QN14 398 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 OTOAQ7RTW8 1153 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 SCYL3Q8IZE3 742 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 ZNF713Q8N859 430 aaPredicted RBP13.24□□□□□ -0.29
CDCA3-212ENST00000604599 C12orf50Q8NA57 414 aaPredicted RBP13.24□□□□□ -0.29
CDCA3-212ENST00000604599 PPFIBP2Q8ND30 876 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 ATL2Q8NHH9 583 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 WDR60Q8WVS4 1066 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 CCDC77Q9BR77 488 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 BHMT2Q9H2M3 363 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 TLE6Q9H808 572 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 DMAP1Q9NPF5 467 aaPredicted RBP13.24□□□□□ -0.29
CDCA3-212ENST00000604599 DNM3Q9UQ16 869 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 WASF2Q9Y6W5 498 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 EXOC1LA0A1B0GW35 172 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 LDHBP07195 334 aaKnown RBP13.24□□□□□ -0.29
CDCA3-212ENST00000604599 POTEJP0CG39 1038 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 ETS2P15036 469 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 KRT15P19012 456 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 RRM1P23921 792 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 NMT1P30419 496 aaKnown RBP13.24□□□□□ -0.29
CDCA3-212ENST00000604599 MYL7Q01449 175 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 MCL1Q07820 350 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 KIF22Q14807 665 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 SLC1A5Q15758 541 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 PDK4Q16654 411 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 PLEKHG4Q58EX7 1191 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 HP1BP3Q5SSJ5 553 aaPredicted RBP13.24□□□□□ -0.29
CDCA3-212ENST00000604599 TRABD2AQ86V40 505 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 ZNF564Q8TBZ8 553 aaPredicted RBP13.24□□□□□ -0.29
CDCA3-212ENST00000604599 MAML1Q92585 1016 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 PTPRN2Q92932 1015 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 STMN2Q93045 179 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 MCUR1Q96AQ8 359 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 TRABDQ9H4I3 376 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 ACP6Q9NPH0 428 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 ACTL7BQ9Y614 415 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 MYO3BQ8WXR4 1341 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 MAST2Q6P0Q8 1798 aa13.24□□□□□ -0.29
CDCA3-212ENST00000604599 PSMG1O95456 288 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 SMARCA1P28370 1054 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 SLC16A2P36021 539 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 CTC1Q2NKJ3 1217 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 HS2ST1Q7LGA3 356 aa13.23□□□□□ -0.29
CDCA3-212ENST00000604599 NUP85Q9BW27 656 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms