RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 CLNS1AP54105 237 aaKnown RBP14.15□□□□□ -0.14
VRK3-209ENST00000594948 MAP2K1Q02750 393 aaPredicted RBP14.15□□□□□ -0.14
VRK3-209ENST00000594948 STAT4Q14765 748 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 CCDC38Q502W7 563 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 STRIP1Q5VSL9 837 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 NUGGCQ68CJ6 796 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 PPP1R21Q6ZMI0 780 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 PLEKHO2Q8TD55 490 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 KAT5Q92993 513 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 TRIM11Q96F44 468 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 MXRA8Q9BRK3 442 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 CBWD1Q9BRT8 395 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 TRIM7Q9C029 511 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 PCIF1Q9H4Z3 704 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 ASIC3Q9UHC3 531 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 SERPINA10Q9UK55 444 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 WDR81Q562E7 1941 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 A0A1W2PRG0 241 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 IPO5O00410 1097 aaKnown RBP14.14□□□□□ -0.15
VRK3-209ENST00000594948 CLDN3O15551 220 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 ATMINO43313 823 aaPredicted RBP14.14□□□□□ -0.15
VRK3-209ENST00000594948 CDH16O75309 829 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 GH2P01242 217 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 ABHD2P08910 425 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 MYBL1P10243 752 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 DLATP10515 647 aaKnown RBP14.14□□□□□ -0.15
VRK3-209ENST00000594948 CCNB1P14635 433 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 BRAFP15056 766 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 ATF2P15336 505 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 TAL1P17542 331 aaPredicted RBP14.14□□□□□ -0.15
VRK3-209ENST00000594948 ALDH1B1P30837 517 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 ALDH5A1P51649 535 aaPredicted RBP14.14□□□□□ -0.15
VRK3-209ENST00000594948 NCKAP1LP55160 1127 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 STRN3Q13033 797 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 NR1H3Q13133 447 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 CLEC16AQ2KHT3 1053 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 KRT39Q6A163 491 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 ENOSF1Q7L5Y1 443 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 SLC47A2Q86VL8 602 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 LARGE2Q8N3Y3 721 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 ATL2Q8NHH9 583 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 HELQQ8TDG4 1101 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 TMC2Q8TDI7 906 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 CHURC1Q8WUH1 139 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 DDX1Q92499 740 aaKnown RBP14.14□□□□□ -0.15
VRK3-209ENST00000594948 KLHL29Q96CT2 875 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 NGLY1Q96IV0 654 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 CCDC77Q9BR77 488 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 DCLK3Q9C098 648 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 TMEM8AQ9HCN3 771 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 NINJ2Q9NZG7 142 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 EXOC7Q9UPT5 735 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 TMX2Q9Y320 296 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 CD2APQ9Y5K6 639 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 PSME4Q14997 1843 aa14.14□□□□□ -0.15
VRK3-209ENST00000594948 IGF2BP3O00425 579 aaKnown RBP eCLIP14.13□□□□□ -0.15
VRK3-209ENST00000594948 ATP5HO75947 161 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 ACSL3O95573 720 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 CHKAP35790 457 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 CCNG1P51959 295 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 ITGA8P53708 1063 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 SLC18A1P54219 525 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 CACNB3P54284 484 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 KCNJ2P63252 427 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 TNIP1Q15025 636 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 MTFR1Q15390 333 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 SLC30A10Q6XR72 485 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 MIER3Q7Z3K6 550 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 HAUS6Q7Z4H7 955 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 PPM1KQ8N3J5 372 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 AGAP11Q8TF27 550 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 STAMBPL1Q96FJ0 436 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 NT5C1BQ96P26 610 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 EURLQ9NYK6 297 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 NKIRAS1Q9NYS0 192 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 ANAPC5Q9UJX4 755 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.13□□□□□ -0.15
VRK3-209ENST00000594948 ARID2Q68CP9 1835 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 THAP12O43422 761 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 GRIN3BO60391 1043 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 ZC3H11AO75152 810 aaKnown RBP eCLIP14.13□□□□□ -0.15
VRK3-209ENST00000594948 ANP32DO95626 131 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 MAPK4P31152 587 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 STX2P32856 288 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 RARRES1P49788 294 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 LRRC14Q15048 493 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 DACT2Q5SW24 774 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 FAM160B2Q86V87 743 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 ZNF677Q86XU0 584 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 ANKRD35Q8N283 1001 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 C1orf54Q8WWF1 131 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 TBC1D31Q96DN5 1066 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 FAM212AQ96EL1 285 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 BTBD6Q96KE9 485 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 RAB3IPQ96QF0 476 aaPredicted RBP14.13□□□□□ -0.15
VRK3-209ENST00000594948 TGS1Q96RS0 853 aaKnown RBP14.13□□□□□ -0.15
VRK3-209ENST00000594948 TMX4Q9H1E5 349 aaPredicted RBP14.13□□□□□ -0.15
VRK3-209ENST00000594948 UBN1Q9NPG3 1134 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 KLHL14Q9P2G3 628 aa14.13□□□□□ -0.15
VRK3-209ENST00000594948 HERC5Q9UII4 1024 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms