RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 TBC1D1Q86TI0 1168 aaPredicted RBP6.36□□□□□ -1.39
NPC1-213ENST00000591955 ZSCAN29Q8IWY8 852 aaPredicted RBP6.36□□□□□ -1.39
NPC1-213ENST00000591955 DNAJC5GQ8N7S2 189 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 ABTB2Q8N961 1025 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 C12orf50Q8NA57 414 aaPredicted RBP6.36□□□□□ -1.39
NPC1-213ENST00000591955 USP38Q8NB14 1042 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 ZNF507Q8TCN5 953 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 ZNF398Q8TD17 642 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 NEK9Q8TD19 979 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 PIGOQ8TEQ8 1089 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 NELFBQ8WX92 580 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 SLC7A3Q8WY07 619 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 PAGE5Q96GU1 130 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 RBM17Q96I25 401 aaKnown RBP6.36□□□□□ -1.39
NPC1-213ENST00000591955 AGAP3Q96P47 875 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 HAPLN3Q96S86 360 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 UBAC1Q9BSL1 405 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.36□□□□□ -1.391e-6■■■■■ 38.5
NPC1-213ENST00000591955 RANBP17Q9H2T7 1088 aaKnown RBP6.36□□□□□ -1.39
NPC1-213ENST00000591955 NCOA5Q9HCD5 579 aaKnown RBP6.36□□□□□ -1.39
NPC1-213ENST00000591955 METTL14Q9HCE5 456 aaKnown RBP6.36□□□□□ -1.39
NPC1-213ENST00000591955 PCDH18Q9HCL0 1135 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 CCDC87Q9NVE4 849 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 PAG1Q9NWQ8 432 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 HDAC6Q9UBN7 1215 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 DNAJB4Q9UDY4 337 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 MTRF1LQ9UGC7 380 aaKnown RBP6.36□□□□□ -1.39
NPC1-213ENST00000591955 PRKAG2Q9UGJ0 569 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 CTNND2Q9UQB3 1225 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 TMED5Q9Y3A6 229 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 PCDHA13Q9Y5I0 950 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 NFS1Q9Y697 457 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 BZW2Q9Y6E2 419 aaKnown RBP6.36□□□□□ -1.39
NPC1-213ENST00000591955 KDM3BQ7LBC6 1761 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 KIAA1551Q9HCM1 1747 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 C5P01031 1676 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 USP54Q70EL1 1684 aa6.36□□□□□ -1.39
NPC1-213ENST00000591955 CICQ96RK0 1608 aaPredicted RBP6.36□□□□□ -1.39
NPC1-213ENST00000591955 MACROD2A1Z1Q3 448 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 KIF28PB7ZC32 967 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 PGRMC1O00264 195 aaKnown RBP6.35□□□□□ -1.39
NPC1-213ENST00000591955 LAD1O00515 517 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 CETN3O15182 167 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 NVLO15381 856 aaKnown RBP6.35□□□□□ -1.39
NPC1-213ENST00000591955 SKAP2O75563 359 aaPredicted RBP6.35□□□□□ -1.39
NPC1-213ENST00000591955 GFPT2O94808 682 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 GCP02774 474 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 GNAZP19086 355 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 ALDH1B1P30837 517 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 LONP1P36776 959 aaKnown RBP6.35□□□□□ -1.39
NPC1-213ENST00000591955 RGS2P41220 211 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 MAGEA1P43355 309 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 CARSP49589 748 aaKnown RBP6.35□□□□□ -1.39
NPC1-213ENST00000591955 PEX5P50542 639 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 KIF11P52732 1056 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 SESN3P58005 492 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 EIF4A1P60842 406 aaKnown RBP6.35□□□□□ -1.39
NPC1-213ENST00000591955 IRX4P78413 519 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 XIAPP98170 497 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 DHX34Q14147 1143 aaKnown RBP6.35□□□□□ -1.39
NPC1-213ENST00000591955 MYBPC3Q14896 1274 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 RABL6Q3YEC7 729 aaPredicted RBP6.35□□□□□ -1.39
NPC1-213ENST00000591955 SLC9C1Q4G0N8 1177 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 PABPC1LQ4VXU2 614 aaKnown RBP6.35□□□□□ -1.39
NPC1-213ENST00000591955 RRAGBQ5VZM2 374 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 HGSNATQ68CP4 663 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 DENND2CQ68D51 928 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 CDPF1Q6NVV7 123 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 TMEM154Q6P9G4 183 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 INTS8Q75QN2 995 aaKnown RBP6.35□□□□□ -1.39
NPC1-213ENST00000591955 MYLK4Q86YV6 388 aaPredicted RBP6.35□□□□□ -1.39
NPC1-213ENST00000591955 CROCCP3Q8IVE0 287 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 GSPT2Q8IYD1 628 aaKnown RBP6.35□□□□□ -1.39
NPC1-213ENST00000591955 ST13P4Q8IZP2 240 aaPredicted RBP6.35□□□□□ -1.39
NPC1-213ENST00000591955 STK11IPQ8N1F8 1099 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 SMYD1Q8NB12 490 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 DDX54Q8TDD1 881 aaKnown RBP6.35□□□□□ -1.39
NPC1-213ENST00000591955 ASAP3Q8TDY4 903 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 FBLIM1Q8WUP2 373 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 IFT81Q8WYA0 676 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 CTNNBL1Q8WYA6 563 aaPredicted RBP6.35□□□□□ -1.39
NPC1-213ENST00000591955 GATA6Q92908 595 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 NDNQ99608 321 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 TCHPQ9BT92 498 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 RABEP2Q9H5N1 569 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 PPCSQ9HAB8 311 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 CYP4F12Q9HCS2 524 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 ATP8A2Q9NTI2 1148 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 RBM12Q9NTZ6 932 aaKnown RBP6.35□□□□□ -1.39
NPC1-213ENST00000591955 UTP6Q9NYH9 597 aaKnown RBP6.35□□□□□ -1.39
NPC1-213ENST00000591955 TMEM59LQ9UK28 342 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 INTUQ9ULD6 942 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 TTC7AQ9ULT0 858 aaPredicted RBP6.35□□□□□ -1.39
NPC1-213ENST00000591955 SOX13Q9UN79 622 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 ACTL7BQ9Y614 415 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 LTN1O94822 1766 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 KAT6BQ8WYB5 2073 aa6.35□□□□□ -1.39
NPC1-213ENST00000591955 LAMA4Q16363 1823 aa6.34□□□□□ -1.39
NPC1-213ENST00000591955 RTL9Q8NET4 1388 aa6.34□□□□□ -1.39
NPC1-213ENST00000591955 C4AP0C0L4 1744 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms