RNA–Protein interactions for RNA: ENST00000591645.1

TPM4-214, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-214ENST00000591645 SLC35B2Q8TB61 432 aa4.93□□□□□ -1.62
TPM4-214ENST00000591645 CRAMP1Q96RY5 1269 aa4.93□□□□□ -1.62
TPM4-214ENST00000591645 NEU1Q99519 415 aa4.93□□□□□ -1.62
TPM4-214ENST00000591645 TOR3AQ9H497 397 aa4.93□□□□□ -1.62
TPM4-214ENST00000591645 LANCL2Q9NS86 450 aa4.93□□□□□ -1.62
TPM4-214ENST00000591645 MOCS1Q9NZB8 636 aa4.93□□□□□ -1.62
TPM4-214ENST00000591645 POGKQ9P215 609 aa4.93□□□□□ -1.62
TPM4-214ENST00000591645 PACSIN3Q9UKS6 424 aa4.93□□□□□ -1.62
TPM4-214ENST00000591645 COL4A3Q01955 1670 aa4.92□□□□□ -1.62
TPM4-214ENST00000591645 PHLDB1Q86UU1 1377 aa4.92□□□□□ -1.62
TPM4-214ENST00000591645 TRIM75PA6NK02 468 aa4.92□□□□□ -1.62
TPM4-214ENST00000591645 DRGXA6NNA5 263 aa4.92□□□□□ -1.62
TPM4-214ENST00000591645 FAM171A2A8MVW0 826 aa4.92□□□□□ -1.62
TPM4-214ENST00000591645 ZNF185O15231 689 aa4.92□□□□□ -1.62
TPM4-214ENST00000591645 HLA-DOAP06340 250 aa4.92□□□□□ -1.62
TPM4-214ENST00000591645 CCT2P78371 535 aaKnown RBP4.92□□□□□ -1.62
TPM4-214ENST00000591645 BLOC1S1P78537 153 aa4.92□□□□□ -1.62
TPM4-214ENST00000591645 OTUD7BQ6GQQ9 843 aa4.92□□□□□ -1.62
TPM4-214ENST00000591645 NECAB2Q7Z6G3 386 aa4.92□□□□□ -1.62
TPM4-214ENST00000591645 VRK3Q8IV63 474 aa4.92□□□□□ -1.62
TPM4-214ENST00000591645 PQLC1Q8N2U9 271 aa4.92□□□□□ -1.62
TPM4-214ENST00000591645 CYFIP2Q96F07 1278 aa4.92□□□□□ -1.62
TPM4-214ENST00000591645 ADI1Q9BV57 179 aa4.92□□□□□ -1.62
TPM4-214ENST00000591645 SERHL2Q9H4I8 314 aa4.92□□□□□ -1.62
TPM4-214ENST00000591645 DMRT3Q9NQL9 472 aa4.92□□□□□ -1.62
TPM4-214ENST00000591645 MCM8Q9UJA3 840 aa4.92□□□□□ -1.62
TPM4-214ENST00000591645 ZBTB21Q9ULJ3 1066 aa4.92□□□□□ -1.62
TPM4-214ENST00000591645 GPR45Q9Y5Y3 372 aa4.92□□□□□ -1.62
TPM4-214ENST00000591645 FPGT-TNNI3KV9GXZ4 949 aa4.92□□□□□ -1.62
TPM4-214ENST00000591645 WASHC2AQ641Q2 1341 aa4.92□□□□□ -1.62
TPM4-214ENST00000591645 WNT10BO00744 389 aa4.91□□□□□ -1.62
TPM4-214ENST00000591645 TEX33O43247 280 aa4.91□□□□□ -1.62
TPM4-214ENST00000591645 LPXNO60711 386 aa4.91□□□□□ -1.62
TPM4-214ENST00000591645 PPFIA2O75334 1257 aa4.91□□□□□ -1.62
TPM4-214ENST00000591645 NDUFA10O95299 355 aa4.91□□□□□ -1.62
TPM4-214ENST00000591645 ADRA1BP35368 520 aa4.91□□□□□ -1.62
TPM4-214ENST00000591645 ZEB1P37275 1124 aaPredicted RBP4.91□□□□□ -1.62
TPM4-214ENST00000591645 CHN2P52757 468 aa4.91□□□□□ -1.62
TPM4-214ENST00000591645 KLF1Q13351 362 aaPredicted RBP4.91□□□□□ -1.62
TPM4-214ENST00000591645 AFMIDQ63HM1 303 aa4.91□□□□□ -1.62
TPM4-214ENST00000591645 Q6YL49 198 aa4.91□□□□□ -1.62
TPM4-214ENST00000591645 ATL2Q8NHH9 583 aa4.91□□□□□ -1.62
TPM4-214ENST00000591645 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.91□□□□□ -1.623e-6■□□□□ 10.7
TPM4-214ENST00000591645 COG1Q8WTW3 980 aa4.91□□□□□ -1.62
TPM4-214ENST00000591645 COQ10AQ96MF6 247 aa4.91□□□□□ -1.62
TPM4-214ENST00000591645 UHRF1Q96T88 793 aaPredicted RBP4.91□□□□□ -1.62
TPM4-214ENST00000591645 ADAM2Q99965 735 aa4.91□□□□□ -1.62
TPM4-214ENST00000591645 TEX101Q9BY14 249 aa4.91□□□□□ -1.62
TPM4-214ENST00000591645 PUS7LQ9H0K6 701 aaKnown RBP4.91□□□□□ -1.62
TPM4-214ENST00000591645 SYBUQ9NX95 663 aa4.91□□□□□ -1.62
TPM4-214ENST00000591645 SIK3Q9Y2K2 1263 aa4.91□□□□□ -1.62
TPM4-214ENST00000591645 TNFRSF18Q9Y5U5 241 aa4.91□□□□□ -1.62
TPM4-214ENST00000591645 PCSK5Q92824 1860 aa4.91□□□□□ -1.62
TPM4-214ENST00000591645 PNPLA7Q6ZV29 1317 aa4.91□□□□□ -1.62
TPM4-214ENST00000591645 LMNAP02545 664 aaKnown RBP4.9□□□□□ -1.63
TPM4-214ENST00000591645 CFIP05156 583 aa4.9□□□□□ -1.63
TPM4-214ENST00000591645 AGXTP21549 392 aa4.9□□□□□ -1.63
TPM4-214ENST00000591645 DDX6P26196 483 aaKnown RBP eCLIP4.9□□□□□ -1.63
TPM4-214ENST00000591645 WASP42768 502 aa4.9□□□□□ -1.63
TPM4-214ENST00000591645 SLC6A9P48067 706 aa4.9□□□□□ -1.63
TPM4-214ENST00000591645 PER3P56645 1201 aa4.9□□□□□ -1.63
TPM4-214ENST00000591645 GUCY1B3Q02153 619 aa4.9□□□□□ -1.63
TPM4-214ENST00000591645 SEPT2Q15019 361 aa4.9□□□□□ -1.63
TPM4-214ENST00000591645 HECTD2Q5U5R9 776 aa4.9□□□□□ -1.63
TPM4-214ENST00000591645 SEM1Q6ZVN7 128 aa4.9□□□□□ -1.63
TPM4-214ENST00000591645 CPEB3Q8NE35 698 aaKnown RBP4.9□□□□□ -1.63
TPM4-214ENST00000591645 FUBP1Q96AE4 644 aaKnown RBP4.9□□□□□ -1.63
TPM4-214ENST00000591645 FUBP3Q96I24 572 aaKnown RBP eCLIP4.9□□□□□ -1.63
TPM4-214ENST00000591645 MRI1Q9BV20 369 aa4.9□□□□□ -1.63
TPM4-214ENST00000591645 FAM126AQ9BYI3 521 aaPredicted RBP4.9□□□□□ -1.63
TPM4-214ENST00000591645 SENP6Q9GZR1 1112 aaPredicted RBP4.9□□□□□ -1.63
TPM4-214ENST00000591645 KLHL11Q9NVR0 708 aa4.9□□□□□ -1.63
TPM4-214ENST00000591645 USP15Q9Y4E8 981 aaPredicted RBP4.9□□□□□ -1.63
TPM4-214ENST00000591645 PIPSLA2A3N6 862 aa4.89□□□□□ -1.63
TPM4-214ENST00000591645 OSMP13725 252 aa4.89□□□□□ -1.63
TPM4-214ENST00000591645 ATP5JP18859 108 aa4.89□□□□□ -1.63
TPM4-214ENST00000591645 ALDH1A3P47895 512 aa4.89□□□□□ -1.63
TPM4-214ENST00000591645 AVPR1BP47901 424 aa4.89□□□□□ -1.63
TPM4-214ENST00000591645 MXRA7P84157 204 aa4.89□□□□□ -1.63
TPM4-214ENST00000591645 FSTL1Q12841 308 aa4.89□□□□□ -1.63
TPM4-214ENST00000591645 NOMO1Q15155 1222 aa4.89□□□□□ -1.63
TPM4-214ENST00000591645 INAVAQ3KP66 663 aa4.89□□□□□ -1.63
TPM4-214ENST00000591645 ABHD17BQ5VST6 288 aa4.89□□□□□ -1.63
TPM4-214ENST00000591645 BEND2Q8NDZ0 799 aa4.89□□□□□ -1.63
TPM4-214ENST00000591645 OR56A1Q8NGH5 318 aa4.89□□□□□ -1.63
TPM4-214ENST00000591645 LINC00476Q8WZB0 136 aa4.89□□□□□ -1.63
TPM4-214ENST00000591645 WDR11Q9BZH6 1224 aa4.89□□□□□ -1.63
TPM4-214ENST00000591645 REXO4Q9GZR2 422 aaKnown RBP4.89□□□□□ -1.63
TPM4-214ENST00000591645 MANSC1Q9H8J5 431 aa4.89□□□□□ -1.63
TPM4-214ENST00000591645 CYP4F11Q9HBI6 524 aa4.89□□□□□ -1.63
TPM4-214ENST00000591645 SPC25Q9HBM1 224 aa4.89□□□□□ -1.63
TPM4-214ENST00000591645 TMEM140Q9NV12 185 aa4.89□□□□□ -1.63
TPM4-214ENST00000591645 ANKFY1Q9P2R3 1169 aa4.89□□□□□ -1.63
TPM4-214ENST00000591645 ATP11BQ9Y2G3 1177 aa4.89□□□□□ -1.63
TPM4-214ENST00000591645 SPDEFO95238 335 aa4.88□□□□□ -1.63
TPM4-214ENST00000591645 POMCP01189 267 aa4.88□□□□□ -1.63
TPM4-214ENST00000591645 GSPT1P15170 499 aaKnown RBP4.88□□□□□ -1.63
TPM4-214ENST00000591645 GCSHP23434 173 aa4.88□□□□□ -1.63
TPM4-214ENST00000591645 USP14P54578 494 aa4.88□□□□□ -1.63
TPM4-214ENST00000591645 MTM1Q13496 603 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms