RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 BOLA2-SMG1P6H3BVE0 249 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 SUN1O94901 812 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 NDUFA10O95299 355 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 OXSR1O95747 527 aaPredicted RBP10.6□□□□□ -0.71
ZNF540-203ENST00000586134 OAS1P00973 400 aaKnown RBP10.6□□□□□ -0.71
ZNF540-203ENST00000586134 CYP1A1P04798 512 aaPredicted RBP10.6□□□□□ -0.71
ZNF540-203ENST00000586134 LYNP07948 512 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 CTGFP29279 349 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 PAFAH1B1P43034 410 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 HMGCS2P54868 508 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 STK38Q15208 465 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.6□□□□□ -0.71
ZNF540-203ENST00000586134 CCDC122Q5T0U0 273 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 USP17L2Q6R6M4 530 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 B3GNT6Q6ZMB0 384 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 PATL1Q86TB9 770 aaKnown RBP10.6□□□□□ -0.71
ZNF540-203ENST00000586134 GRAMD2AQ8IUY3 354 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 ZNF713Q8N859 430 aaPredicted RBP10.6□□□□□ -0.71
ZNF540-203ENST00000586134 SLAIN1Q8ND83 568 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 PXYLP1Q8TE99 480 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 STARD8Q92502 1023 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 EFHD2Q96C19 240 aaPredicted RBP10.6□□□□□ -0.71
ZNF540-203ENST00000586134 TMEM106CQ9BVX2 250 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 BOLA2Q9H3K6 86 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 DCP1AQ9NPI6 582 aaPredicted RBP10.6□□□□□ -0.71
ZNF540-203ENST00000586134 ABCF3Q9NUQ8 709 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 GTF3C4Q9UKN8 822 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 USP15Q9Y4E8 981 aaPredicted RBP10.6□□□□□ -0.71
ZNF540-203ENST00000586134 IKBKGQ9Y6K9 419 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 GREB1LQ9C091 1923 aaPredicted RBP10.6□□□□□ -0.71
ZNF540-203ENST00000586134 TRIM64CA6NLI5 447 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 H0YGN5 161 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 TEX28O15482 410 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 SPATA31D3P0C874 917 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 ERCC5P28715 1186 aaPredicted RBP10.6□□□□□ -0.71
ZNF540-203ENST00000586134 TKTP29401 623 aaKnown RBP10.6□□□□□ -0.71
ZNF540-203ENST00000586134 TXKP42681 527 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 EMP3P54852 163 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 ERVK-24P63145 666 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 DHX9Q08211 1270 aaKnown RBP10.6□□□□□ -0.71
ZNF540-203ENST00000586134 LRP8Q14114 963 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 SEPT6Q14141 434 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 TREML2Q5T2D2 321 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 TSHZ3Q63HK5 1081 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 SPATA31D4Q6ZUB0 917 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 PALB2Q86YC2 1186 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 INPP5DQ92835 1189 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 HPS3Q969F9 1004 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 DGCR14Q96DF8 476 aaKnown RBP10.6□□□□□ -0.71
ZNF540-203ENST00000586134 NSMCE3Q96MG7 304 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 GSDMAQ96QA5 445 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 CENPOQ9BU64 300 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 KIAA1683Q9H0B3 1180 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 ASCC2Q9H1I8 757 aaPredicted RBP10.6□□□□□ -0.71
ZNF540-203ENST00000586134 POLD4Q9HCU8 107 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 ABHD10Q9NUJ1 306 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 FKBP14Q9NWM8 211 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 COMMD8Q9NX08 183 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 NFS1Q9Y697 457 aa10.6□□□□□ -0.71
ZNF540-203ENST00000586134 SPTLC1O15269 473 aa10.59□□□□□ -0.71
ZNF540-203ENST00000586134 SPTLC2O15270 562 aa10.59□□□□□ -0.71
ZNF540-203ENST00000586134 SNX3O60493 162 aa10.59□□□□□ -0.71
ZNF540-203ENST00000586134 BDNFP23560 247 aa10.59□□□□□ -0.71
ZNF540-203ENST00000586134 SHMT1P34896 483 aa10.59□□□□□ -0.71
ZNF540-203ENST00000586134 RTP1P59025 263 aa10.59□□□□□ -0.71
ZNF540-203ENST00000586134 MTMR2Q13614 643 aa10.59□□□□□ -0.71
ZNF540-203ENST00000586134 TOB2Q14106 344 aaPredicted RBP10.59□□□□□ -0.71
ZNF540-203ENST00000586134 CERKLQ49MI3 558 aaPredicted RBP10.59□□□□□ -0.71
ZNF540-203ENST00000586134 CCDC84Q86UT8 332 aaPredicted RBP10.59□□□□□ -0.71
ZNF540-203ENST00000586134 TREML1Q86YW5 311 aa10.59□□□□□ -0.71
ZNF540-203ENST00000586134 LRRC8CQ8TDW0 803 aa10.59□□□□□ -0.71
ZNF540-203ENST00000586134 GAB3Q8WWW8 586 aa10.59□□□□□ -0.71
ZNF540-203ENST00000586134 PRPF18Q99633 342 aaKnown RBP10.59□□□□□ -0.71
ZNF540-203ENST00000586134 LRMDAQ9H2I8 198 aa10.59□□□□□ -0.71
ZNF540-203ENST00000586134 DPH5Q9H2P9 285 aa10.59□□□□□ -0.71
ZNF540-203ENST00000586134 CABP5Q9NP86 173 aa10.59□□□□□ -0.71
ZNF540-203ENST00000586134 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.59□□□□□ -0.71
ZNF540-203ENST00000586134 USP20Q9Y2K6 914 aa10.59□□□□□ -0.71
ZNF540-203ENST00000586134 SNX9Q9Y5X1 595 aa10.59□□□□□ -0.71
ZNF540-203ENST00000586134 PARP14Q460N5 1801 aa10.59□□□□□ -0.71
ZNF540-203ENST00000586134 FBP2O00757 339 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 SLC26A4O43511 780 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 FBXO21O94952 628 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 GH2P01242 217 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 APOEP02649 317 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 POLR3DP05423 398 aaPredicted RBP10.58□□□□□ -0.72
ZNF540-203ENST00000586134 PIM1P11309 404 aaPredicted RBP10.58□□□□□ -0.72
ZNF540-203ENST00000586134 UBL4AP11441 157 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 CDK4P11802 303 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 IDEP14735 1019 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 PFKFB1P16118 471 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 GRK4P32298 578 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 SYKP43405 635 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 ARFIP2P53365 341 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 JAG1P78504 1218 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 PLCB3Q01970 1234 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 TUBA3CQ13748 450 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 E2F2Q14209 437 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 ABCB5Q2M3G0 1257 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 FAM209AQ5JX71 171 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms