RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 UCHL3P15374 230 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 TBXAS1P24557 533 aaPredicted RBP6.69□□□□□ -1.34
LIG3-206ENST00000586058 ANXA13P27216 316 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 GCLMP48507 274 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 ACOT2P49753 483 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 FXR1P51114 621 aaKnown RBP eCLIP6.69□□□□□ -1.34
LIG3-206ENST00000586058 MRPS6P82932 125 aaKnown RBP6.69□□□□□ -1.34
LIG3-206ENST00000586058 POU5F1Q01860 360 aaKnown RBP6.69□□□□□ -1.34
LIG3-206ENST00000586058 MCL1Q07820 350 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 KLHL30Q0D2K2 578 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 TMEM62Q0P6H9 643 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 PTPN14Q15678 1187 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 KCNA10Q16322 511 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 PTPN21Q16825 1174 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 NBPF20Q3BBV1 942 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 DMRTA1Q5VZB9 504 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 PDXDC1Q6P996 788 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 TAS1R3Q7RTX0 852 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 NT5DC4Q86YG4 428 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 CD302Q8IX05 232 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 THNSL1Q8IYQ7 743 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 PPM1KQ8N3J5 372 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 LINC01465Q8N7H1 131 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 TRPV1Q8NER1 839 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 KIAA1524Q8TCG1 905 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 PARD3BQ8TEW8 1205 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 DNAJB3Q8WWF6 145 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 SYN2Q92777 582 aaPredicted RBP6.69□□□□□ -1.34
LIG3-206ENST00000586058 KAT2BQ92831 832 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 ZNF668Q96K58 619 aaPredicted RBP6.69□□□□□ -1.34
LIG3-206ENST00000586058 MFSD14AQ96MC6 490 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 FBXL18Q96ME1 805 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 OSMRQ99650 979 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.69□□□□□ -1.34
LIG3-206ENST00000586058 INTS2Q9H0H0 1204 aaKnown RBP6.69□□□□□ -1.34
LIG3-206ENST00000586058 KCNF1Q9H3M0 494 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 FZD8Q9H461 694 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 STARD7Q9NQZ5 370 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 PIN4Q9Y237 131 aaKnown RBP6.69□□□□□ -1.34
LIG3-206ENST00000586058 PTCH2Q9Y6C5 1203 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 MICAL3Q7RTP6 2002 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 SSU72P8A0A1W2PR75 194 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 LRRIQ3A6PVS8 624 aaPredicted RBP6.68□□□□□ -1.34
LIG3-206ENST00000586058 GPR182O15218 404 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 TREHO43280 583 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 TSPAN1O60635 241 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 RPS6KA5O75582 802 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 NPTXRO95502 500 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 IGHA2P01877 340 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 GJB1P08034 283 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 CLTAP09496 248 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 DARSP14868 501 aaKnown RBP6.68□□□□□ -1.34
LIG3-206ENST00000586058 ZSCAN20P17040 1043 aaPredicted RBP6.68□□□□□ -1.34
LIG3-206ENST00000586058 ATF7P17544 494 aaPredicted RBP6.68□□□□□ -1.34
LIG3-206ENST00000586058 ARF4P18085 180 aaPredicted RBP6.68□□□□□ -1.34
LIG3-206ENST00000586058 EIF4BP23588 611 aaKnown RBP6.68□□□□□ -1.34
LIG3-206ENST00000586058 PON1P27169 355 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 ADSSP30520 456 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 KLK7P49862 253 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 RAB27AP51159 221 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 PDE6CP51160 858 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 ACLYP53396 1101 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 CRYBB1P53674 252 aaPredicted RBP6.68□□□□□ -1.34
LIG3-206ENST00000586058 NKX3-2P78367 333 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 HTRA3P83110 453 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 CDK17Q00537 523 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 GOLGA8FQ08AF8 430 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 GOLGA8DPQ0D2H9 430 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 TRIM32Q13049 653 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 ITGA7Q13683 1181 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 PTGISQ16647 500 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 MARCH8Q5T0T0 291 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 MAP3K21Q5TCX8 1036 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 KLHDC7AQ5VTJ3 777 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 TWF2Q6IBS0 349 aaKnown RBP6.68□□□□□ -1.34
LIG3-206ENST00000586058 SLC39A4Q6P5W5 647 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 SESTD1Q86VW0 696 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 KIAA0319LQ8IZA0 1049 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 USP38Q8NB14 1042 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 ACAP3Q96P50 834 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 RPS6KC1Q96S38 1066 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 TSPAN18Q96SJ8 248 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.68□□□□□ -1.34
LIG3-206ENST00000586058 TTYH3Q9C0H2 523 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 CDT1Q9H211 546 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 IKZF4Q9H2S9 585 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 PDZD7Q9H5P4 517 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 ASB7Q9H672 318 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 IFT122Q9HBG6 1241 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 AGPAT5Q9NUQ2 364 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 SEPT11Q9NVA2 429 aaKnown RBP6.68□□□□□ -1.34
LIG3-206ENST00000586058 RAB20Q9NX57 234 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 DNAJC12Q9UKB3 198 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 PLAGL2Q9UPG8 496 aa6.68□□□□□ -1.34
LIG3-206ENST00000586058 TSC2P49815 1807 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 A0A1W2PQ45 241 aaPredicted RBP6.67□□□□□ -1.34
LIG3-206ENST00000586058 A0A1W2PQY0 241 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 MYADML2A6NDP7 307 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 SOWAHDA6NJG2 315 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 TK2O00142 265 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms