RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 RESTQ13127 1097 aa22.63■■□□□ 1.21
SRSF1-206ENST00000583741 POLR3FQ9H1D9 316 aaPredicted RBP22.63■■□□□ 1.21
SRSF1-206ENST00000583741 ANKEF1Q9NU02 776 aa22.63■■□□□ 1.21
SRSF1-206ENST00000583741 PARP2Q9UGN5 583 aa22.63■■□□□ 1.21
SRSF1-206ENST00000583741 ZMYM2Q9UBW7 1377 aa22.63■■□□□ 1.21
SRSF1-206ENST00000583741 MIA3Q5JRA6 1907 aa22.63■■□□□ 1.21
SRSF1-206ENST00000583741 PHLDB3Q6NSJ2 640 aa22.62■■□□□ 1.21
SRSF1-206ENST00000583741 KCNG4Q8TDN1 519 aa22.62■■□□□ 1.21
SRSF1-206ENST00000583741 PIGOQ8TEQ8 1089 aa22.62■■□□□ 1.21
SRSF1-206ENST00000583741 HASPINQ8TF76 798 aa22.62■■□□□ 1.21
SRSF1-206ENST00000583741 RPP25Q9BUL9 199 aaKnown RBP22.62■■□□□ 1.21
SRSF1-206ENST00000583741 SLC2A4RGQ9NR83 387 aa22.62■■□□□ 1.21
SRSF1-206ENST00000583741 FBXW11Q9UKB1 542 aa22.62■■□□□ 1.21
SRSF1-206ENST00000583741 PCDHA12Q9UN75 941 aa22.62■■□□□ 1.21
SRSF1-206ENST00000583741 WNT7AO00755 349 aa22.61■■□□□ 1.21
SRSF1-206ENST00000583741 LMNAP02545 664 aaKnown RBP22.61■■□□□ 1.21
SRSF1-206ENST00000583741 CREMQ03060 361 aa22.61■■□□□ 1.21
SRSF1-206ENST00000583741 GNL2Q13823 731 aaKnown RBP22.61■■□□□ 1.21
SRSF1-206ENST00000583741 HSP90AA2PQ14568 343 aaPredicted RBP22.61■■□□□ 1.21
SRSF1-206ENST00000583741 DIS3L2Q8IYB7 885 aaKnown RBP22.61■■□□□ 1.21
SRSF1-206ENST00000583741 FGF14Q92915 247 aa22.61■■□□□ 1.21
SRSF1-206ENST00000583741 FOXQ1Q9C009 403 aa22.61■■□□□ 1.21
SRSF1-206ENST00000583741 BRMS1Q9HCU9 246 aa22.61■■□□□ 1.21
SRSF1-206ENST00000583741 GPRC5CQ9NQ84 441 aa22.61■■□□□ 1.21
SRSF1-206ENST00000583741 SIT1Q9Y3P8 196 aa22.61■■□□□ 1.21
SRSF1-206ENST00000583741 SF3B1O75533 1304 aaKnown RBP eCLIP22.61■■□□□ 1.213e-9■■■□□ 19.1
SRSF1-206ENST00000583741 TTLL13PA6NNM8 815 aa22.6■■□□□ 1.21
SRSF1-206ENST00000583741 USO1O60763 962 aaKnown RBP22.6■■□□□ 1.21
SRSF1-206ENST00000583741 TADA2AO75478 443 aa22.6■■□□□ 1.21
SRSF1-206ENST00000583741 KIF4AO95239 1232 aa22.6■■□□□ 1.21
SRSF1-206ENST00000583741 GLULP15104 373 aa22.6■■□□□ 1.21
SRSF1-206ENST00000583741 KRT2P35908 639 aa22.6■■□□□ 1.21
SRSF1-206ENST00000583741 NTHL1P78549 312 aa22.6■■□□□ 1.21
SRSF1-206ENST00000583741 CALCRLQ16602 461 aa22.6■■□□□ 1.21
SRSF1-206ENST00000583741 DCLRE1AQ6PJP8 1040 aa22.6■■□□□ 1.21
SRSF1-206ENST00000583741 GRASPQ7Z6J2 395 aaPredicted RBP22.6■■□□□ 1.21
SRSF1-206ENST00000583741 CCDC43Q96MW1 224 aaKnown RBP22.6■■□□□ 1.21
SRSF1-206ENST00000583741 CLSTN3Q9BQT9 956 aa22.6■■□□□ 1.21
SRSF1-206ENST00000583741 CXCL16Q9H2A7 254 aa22.6■■□□□ 1.21
SRSF1-206ENST00000583741 SEMA4AQ9H3S1 761 aa22.6■■□□□ 1.21
SRSF1-206ENST00000583741 TTC12Q9H892 705 aaPredicted RBP22.6■■□□□ 1.21
SRSF1-206ENST00000583741 GPR179Q6PRD1 2367 aa22.6■■□□□ 1.21
SRSF1-206ENST00000583741 CASTOR2A6NHX0 329 aa22.6■■□□□ 1.21
SRSF1-206ENST00000583741 FSHRP23945 695 aa22.6■■□□□ 1.21
SRSF1-206ENST00000583741 TUSC3Q13454 348 aa22.6■■□□□ 1.21
SRSF1-206ENST00000583741 FOXD4L6Q3SYB3 417 aaPredicted RBP22.6■■□□□ 1.21
SRSF1-206ENST00000583741 PARM1Q6UWI2 310 aa22.6■■□□□ 1.21
SRSF1-206ENST00000583741 FOXD4L3Q6VB84 417 aaPredicted RBP22.6■■□□□ 1.21
SRSF1-206ENST00000583741 BRAPQ7Z569 592 aa22.6■■□□□ 1.21
SRSF1-206ENST00000583741 GBP4Q96PP9 640 aa22.6■■□□□ 1.21
SRSF1-206ENST00000583741 FOXP1Q9H334 677 aaPredicted RBP22.6■■□□□ 1.21
SRSF1-206ENST00000583741 NOTCH4Q99466 2003 aa22.59■■□□□ 1.21
SRSF1-206ENST00000583741 POTEMA6NI47 508 aa22.59■■□□□ 1.21
SRSF1-206ENST00000583741 LRRIQ4A6NIV6 560 aa22.59■■□□□ 1.21
SRSF1-206ENST00000583741 BTBD18B2RXH4 712 aa22.59■■□□□ 1.21
SRSF1-206ENST00000583741 PTGESO14684 152 aa22.59■■□□□ 1.21
SRSF1-206ENST00000583741 LRRN2O75325 713 aa22.59■■□□□ 1.21
SRSF1-206ENST00000583741 SP9P0CG40 484 aa22.59■■□□□ 1.21
SRSF1-206ENST00000583741 GPC5P78333 572 aa22.59■■□□□ 1.21
SRSF1-206ENST00000583741 PPP4R3CPQ6ZMV5 832 aa22.59■■□□□ 1.21
SRSF1-206ENST00000583741 CLEC17AQ6ZS10 378 aa22.59■■□□□ 1.21
SRSF1-206ENST00000583741 MAEAQ7L5Y9 396 aa22.59■■□□□ 1.21
SRSF1-206ENST00000583741 PJA1Q8NG27 643 aa22.59■■□□□ 1.21
SRSF1-206ENST00000583741 LNX1Q8TBB1 728 aaPredicted RBP22.59■■□□□ 1.21
SRSF1-206ENST00000583741 TTPALQ9BTX7 342 aa22.59■■□□□ 1.21
SRSF1-206ENST00000583741 PATJQ8NI35 1801 aa22.58■■□□□ 1.21
SRSF1-206ENST00000583741 ADAM12O43184 909 aa22.58■■□□□ 1.2
SRSF1-206ENST00000583741 U2AF2P26368 475 aaKnown RBP eCLIP22.58■■□□□ 1.27e-14■■■□□ 15.6
SRSF1-206ENST00000583741 TXKP42681 527 aa22.58■■□□□ 1.2
SRSF1-206ENST00000583741 PSMD5Q16401 504 aa22.58■■□□□ 1.2
SRSF1-206ENST00000583741 FAM171A1Q5VUB5 890 aa22.58■■□□□ 1.2
SRSF1-206ENST00000583741 CDCA2Q69YH5 1023 aaPredicted RBP22.58■■□□□ 1.2
SRSF1-206ENST00000583741 C1orf210Q8IVY1 113 aa22.58■■□□□ 1.2
SRSF1-206ENST00000583741 PIK3R5Q8WYR1 880 aa22.58■■□□□ 1.2
SRSF1-206ENST00000583741 RMDN1Q96DB5 314 aa22.58■■□□□ 1.2
SRSF1-206ENST00000583741 CDH7Q9ULB5 785 aa22.58■■□□□ 1.2
SRSF1-206ENST00000583741 ZFP37Q9Y6Q3 630 aaPredicted RBP22.58■■□□□ 1.2
SRSF1-206ENST00000583741 NCOR2Q9Y618 2525 aa22.57■■□□□ 1.2
SRSF1-206ENST00000583741 NEMFO60524 1076 aa22.57■■□□□ 1.2
SRSF1-206ENST00000583741 C8AP07357 584 aa22.57■■□□□ 1.2
SRSF1-206ENST00000583741 STARD6P59095 220 aa22.57■■□□□ 1.2
SRSF1-206ENST00000583741 NAB2Q15742 525 aa22.57■■□□□ 1.2
SRSF1-206ENST00000583741 CEP57Q86XR8 500 aa22.57■■□□□ 1.2
SRSF1-206ENST00000583741 KIAA2013Q8IYS2 634 aa22.57■■□□□ 1.2
SRSF1-206ENST00000583741 PRIMPOLQ96LW4 560 aa22.57■■□□□ 1.2
SRSF1-206ENST00000583741 MTMR9Q96QG7 549 aa22.57■■□□□ 1.2
SRSF1-206ENST00000583741 FZD8Q9H461 694 aa22.57■■□□□ 1.2
SRSF1-206ENST00000583741 PDZD7Q9H5P4 517 aa22.57■■□□□ 1.2
SRSF1-206ENST00000583741 PRMT7Q9NVM4 692 aaPredicted RBP22.57■■□□□ 1.2
SRSF1-206ENST00000583741 SNTG2Q9NY99 539 aa22.57■■□□□ 1.2
SRSF1-206ENST00000583741 TRIP11Q15643 1979 aa22.56■■□□□ 1.2
SRSF1-206ENST00000583741 HNRNPA1P09651 372 aaKnown RBP eCLIP22.56■■□□□ 1.2
SRSF1-206ENST00000583741 SPATA31C1P0DKV0 1188 aa22.56■■□□□ 1.2
SRSF1-206ENST00000583741 LIN9Q5TKA1 542 aa22.56■■□□□ 1.2
SRSF1-206ENST00000583741 FAM173BQ6P4H8 233 aa22.56■■□□□ 1.2
SRSF1-206ENST00000583741 NOSTRINQ8IVI9 506 aa22.56■■□□□ 1.2
SRSF1-206ENST00000583741 MAML2Q8IZL2 1156 aaPredicted RBP22.56■■□□□ 1.2
SRSF1-206ENST00000583741 FGF13Q92913 245 aa22.56■■□□□ 1.2
SRSF1-206ENST00000583741 USP20Q9Y2K6 914 aa22.56■■□□□ 1.2
SRSF1-206ENST00000583741 CCL16O15467 120 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms