RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 SLC5A5Q92911 643 aa12.38□□□□□ -0.43
CASC3-208ENST00000583649 CEP170P1Q96L14 293 aa12.38□□□□□ -0.43
CASC3-208ENST00000583649 RBM8AQ9Y5S9 174 aaKnown RBP12.38□□□□□ -0.43
CASC3-208ENST00000583649 CCDC163A0A0D9SF12 145 aa12.37□□□□□ -0.43
CASC3-208ENST00000583649 SRRM3A6NNA2 597 aaPredicted RBP12.37□□□□□ -0.43
CASC3-208ENST00000583649 PRRG1O14668 218 aa12.37□□□□□ -0.43
CASC3-208ENST00000583649 TRAPPC3O43617 180 aa12.37□□□□□ -0.43
CASC3-208ENST00000583649 RPP40O75818 363 aaKnown RBP12.37□□□□□ -0.43
CASC3-208ENST00000583649 EPN2O95208 641 aa12.37□□□□□ -0.43
CASC3-208ENST00000583649 CCNE1P24864 410 aa12.37□□□□□ -0.43
CASC3-208ENST00000583649 OR1D2P34982 312 aa12.37□□□□□ -0.43
CASC3-208ENST00000583649 ZNF252P-AS1Q0IIN9 211 aa12.37□□□□□ -0.43
CASC3-208ENST00000583649 TUSC3Q13454 348 aa12.37□□□□□ -0.43
CASC3-208ENST00000583649 PFKFB3Q16875 520 aaPredicted RBP12.37□□□□□ -0.43
CASC3-208ENST00000583649 IQCEQ6IPM2 695 aa12.37□□□□□ -0.43
CASC3-208ENST00000583649 APOA5Q6Q788 366 aa12.37□□□□□ -0.43
CASC3-208ENST00000583649 PDZD4Q76G19 769 aaPredicted RBP12.37□□□□□ -0.43
CASC3-208ENST00000583649 ZNF687Q8N1G0 1237 aa12.37□□□□□ -0.43
CASC3-208ENST00000583649 GAB3Q8WWW8 586 aa12.37□□□□□ -0.43
CASC3-208ENST00000583649 ZCCHC14Q8WYQ9 949 aaKnown RBP12.37□□□□□ -0.43
CASC3-208ENST00000583649 PLA2G2FQ9BZM2 168 aa12.37□□□□□ -0.43
CASC3-208ENST00000583649 GPR88Q9GZN0 384 aa12.37□□□□□ -0.43
CASC3-208ENST00000583649 IL25Q9H293 177 aa12.37□□□□□ -0.43
CASC3-208ENST00000583649 RXFP3Q9NSD7 469 aa12.37□□□□□ -0.43
CASC3-208ENST00000583649 HCFC1R1Q9NWW0 138 aa12.37□□□□□ -0.43
CASC3-208ENST00000583649 DAXXQ9UER7 740 aaPredicted RBP12.37□□□□□ -0.43
CASC3-208ENST00000583649 PARP2Q9UGN5 583 aa12.37□□□□□ -0.43
CASC3-208ENST00000583649 TAF6LQ9Y6J9 622 aa12.37□□□□□ -0.43
CASC3-208ENST00000583649 EIF4E1BA6NMX2 242 aaKnown RBP12.36□□□□□ -0.43
CASC3-208ENST00000583649 F8W810 466 aa12.36□□□□□ -0.43
CASC3-208ENST00000583649 INO80B-WBP1J3KQ70 363 aa12.36□□□□□ -0.43
CASC3-208ENST00000583649 ATG13O75143 517 aa12.36□□□□□ -0.43
CASC3-208ENST00000583649 AKAP3O75969 853 aa12.36□□□□□ -0.43
CASC3-208ENST00000583649 QARSP47897 775 aaKnown RBP12.36□□□□□ -0.43
CASC3-208ENST00000583649 RING1Q06587 406 aa12.36□□□□□ -0.43
CASC3-208ENST00000583649 SRSF5Q13243 272 aaKnown RBP12.36□□□□□ -0.43
CASC3-208ENST00000583649 ELF2Q15723 593 aa12.36□□□□□ -0.43
CASC3-208ENST00000583649 RNF20Q5VTR2 975 aa12.36□□□□□ -0.43
CASC3-208ENST00000583649 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.36□□□□□ -0.43
CASC3-208ENST00000583649 ANKS3Q6ZW76 656 aa12.36□□□□□ -0.43
CASC3-208ENST00000583649 HAUS6Q7Z4H7 955 aa12.36□□□□□ -0.43
CASC3-208ENST00000583649 MAP4K3Q8IVH8 894 aa12.36□□□□□ -0.43
CASC3-208ENST00000583649 LEMD2Q8NC56 503 aa12.36□□□□□ -0.43
CASC3-208ENST00000583649 SMARCD2Q92925 531 aa12.36□□□□□ -0.43
CASC3-208ENST00000583649 CEP89Q96ST8 783 aa12.36□□□□□ -0.43
CASC3-208ENST00000583649 SH2D3AQ9BRG2 576 aa12.36□□□□□ -0.43
CASC3-208ENST00000583649 EIF2AQ9BY44 585 aaKnown RBP12.36□□□□□ -0.43
CASC3-208ENST00000583649 MIOSQ9NXC5 875 aa12.36□□□□□ -0.43
CASC3-208ENST00000583649 ANKFY1Q9P2R3 1169 aa12.36□□□□□ -0.43
CASC3-208ENST00000583649 HES2Q9Y543 173 aa12.36□□□□□ -0.43
CASC3-208ENST00000583649 RALGAPA1Q6GYQ0 2036 aa12.35□□□□□ -0.43
CASC3-208ENST00000583649 GOLGA8AA7E2F4 631 aa12.35□□□□□ -0.43
CASC3-208ENST00000583649 GOLGA8BA8MQT2 603 aa12.35□□□□□ -0.43
CASC3-208ENST00000583649 SGSM2O43147 1006 aa12.35□□□□□ -0.43
CASC3-208ENST00000583649 TSPAN1O60635 241 aa12.35□□□□□ -0.43
CASC3-208ENST00000583649 RHOBTB1O94844 696 aa12.35□□□□□ -0.43
CASC3-208ENST00000583649 THP07101 528 aa12.35□□□□□ -0.43
CASC3-208ENST00000583649 CEACAM1P13688 526 aa12.35□□□□□ -0.43
CASC3-208ENST00000583649 AKAP5P24588 427 aa12.35□□□□□ -0.43
CASC3-208ENST00000583649 CHMLP26374 656 aa12.35□□□□□ -0.43
CASC3-208ENST00000583649 MPLP40238 635 aa12.35□□□□□ -0.43
CASC3-208ENST00000583649 RBM25P49756 843 aaKnown RBP12.35□□□□□ -0.43
CASC3-208ENST00000583649 RCAN1P53805 252 aa12.35□□□□□ -0.43
CASC3-208ENST00000583649 PTPAQ15257 358 aa12.35□□□□□ -0.43
CASC3-208ENST00000583649 FAM78AQ5JUQ0 283 aa12.35□□□□□ -0.43
CASC3-208ENST00000583649 SLC27A1Q6PCB7 646 aa12.35□□□□□ -0.43
CASC3-208ENST00000583649 ANO5Q75V66 913 aa12.35□□□□□ -0.43
CASC3-208ENST00000583649 FERMT3Q86UX7 667 aa12.35□□□□□ -0.43
CASC3-208ENST00000583649 HASPINQ8TF76 798 aa12.35□□□□□ -0.43
CASC3-208ENST00000583649 TMEM143Q96AN5 459 aa12.35□□□□□ -0.43
CASC3-208ENST00000583649 LENG9Q96B70 501 aa12.35□□□□□ -0.43
CASC3-208ENST00000583649 ASB16Q96NS5 453 aa12.35□□□□□ -0.43
CASC3-208ENST00000583649 CORO1BQ9BR76 489 aa12.35□□□□□ -0.43
CASC3-208ENST00000583649 SLKQ9H2G2 1235 aaPredicted RBP12.35□□□□□ -0.43
CASC3-208ENST00000583649 RNF39Q9H2S5 420 aa12.35□□□□□ -0.43
CASC3-208ENST00000583649 MINDY3Q9H8M7 445 aa12.35□□□□□ -0.43
CASC3-208ENST00000583649 NAP1L2Q9ULW6 460 aaPredicted RBP12.35□□□□□ -0.43
CASC3-208ENST00000583649 TMEM150BA6NC51 233 aa12.34□□□□□ -0.43
CASC3-208ENST00000583649 K7ESF4 209 aa12.34□□□□□ -0.43
CASC3-208ENST00000583649 PSMD10O75832 226 aa12.34□□□□□ -0.43
CASC3-208ENST00000583649 CEBPBP17676 345 aa12.34□□□□□ -0.43
CASC3-208ENST00000583649 RAP1GAPP47736 663 aa12.34□□□□□ -0.43
CASC3-208ENST00000583649 FGD1P98174 961 aa12.34□□□□□ -0.43
CASC3-208ENST00000583649 POU5F1BQ06416 359 aa12.34□□□□□ -0.43
CASC3-208ENST00000583649 CCDC6Q16204 474 aa12.34□□□□□ -0.43
CASC3-208ENST00000583649 Q4G0T1 1027 aa12.34□□□□□ -0.43
CASC3-208ENST00000583649 PLA2G4FQ68DD2 849 aa12.34□□□□□ -0.43
CASC3-208ENST00000583649 PPP4R3AQ6IN85 833 aa12.34□□□□□ -0.43
CASC3-208ENST00000583649 RALGPS2Q86X27 583 aaPredicted RBP12.34□□□□□ -0.43
CASC3-208ENST00000583649 MFSD6LQ8IWD5 586 aa12.34□□□□□ -0.43
CASC3-208ENST00000583649 CPB2Q96IY4 423 aa12.34□□□□□ -0.43
CASC3-208ENST00000583649 MTRQ99707 1265 aa12.34□□□□□ -0.43
CASC3-208ENST00000583649 EDEM2Q9BV94 578 aa12.34□□□□□ -0.43
CASC3-208ENST00000583649 LRRC2Q9BYS8 371 aa12.34□□□□□ -0.43
CASC3-208ENST00000583649 NXF3Q9H4D5 531 aaKnown RBP12.34□□□□□ -0.43
CASC3-208ENST00000583649 DHX33Q9H6R0 707 aaKnown RBP12.34□□□□□ -0.43
CASC3-208ENST00000583649 MTRRQ9UBK8 725 aa12.34□□□□□ -0.43
CASC3-208ENST00000583649 SLC8A2Q9UPR5 921 aa12.34□□□□□ -0.43
CASC3-208ENST00000583649 BACE2Q9Y5Z0 518 aa12.34□□□□□ -0.43
CASC3-208ENST00000583649 CDY1Q9Y6F8 540 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms