RNA–Protein interactions for RNA: ENST00000581031.5

RHOT1-209, Transcript of ras homolog family member T1, humanhuman

TSL 1 (best)

Gene RHOT1, Length 3,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOT1-209ENST00000581031 SF3A3Q12874 501 aaKnown RBP eCLIP20.15■□□□□ 0.82
RHOT1-209ENST00000581031 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.15■□□□□ 0.82
RHOT1-209ENST00000581031 C11orf70Q9BRQ4 267 aa20.15■□□□□ 0.82
RHOT1-209ENST00000581031 LRRC4CQ9HCJ2 640 aa20.15■□□□□ 0.82
RHOT1-209ENST00000581031 NENFQ9UMX5 172 aa20.15■□□□□ 0.82
RHOT1-209ENST00000581031 NUB1Q9Y5A7 615 aa20.15■□□□□ 0.82
RHOT1-209ENST00000581031 PHIPQ8WWQ0 1821 aa20.14■□□□□ 0.82
RHOT1-209ENST00000581031 A0A0G2JLL6 359 aaPredicted RBP20.14■□□□□ 0.82
RHOT1-209ENST00000581031 TARSL2A2RTX5 802 aaKnown RBP20.14■□□□□ 0.82
RHOT1-209ENST00000581031 SOCS7O14512 581 aa20.14■□□□□ 0.82
RHOT1-209ENST00000581031 CCDC172P0C7W6 258 aa20.14■□□□□ 0.82
RHOT1-209ENST00000581031 IBSPP21815 317 aaPredicted RBP20.14■□□□□ 0.82
RHOT1-209ENST00000581031 GPC5P78333 572 aa20.14■□□□□ 0.82
RHOT1-209ENST00000581031 PPATQ06203 517 aa20.14■□□□□ 0.82
RHOT1-209ENST00000581031 TRIP13Q15645 432 aaPredicted RBP20.14■□□□□ 0.82
RHOT1-209ENST00000581031 IFI16Q16666 785 aaKnown RBP20.14■□□□□ 0.82
RHOT1-209ENST00000581031 SH3D19Q5HYK7 790 aa20.14■□□□□ 0.82
RHOT1-209ENST00000581031 NOL9Q5SY16 702 aaKnown RBP20.14■□□□□ 0.82
RHOT1-209ENST00000581031 FOXR1Q6PIV2 292 aa20.14■□□□□ 0.82
RHOT1-209ENST00000581031 PRRT2Q7Z6L0 340 aaPredicted RBP20.14■□□□□ 0.82
RHOT1-209ENST00000581031 SAMD3Q8N6K7 520 aa20.14■□□□□ 0.82
RHOT1-209ENST00000581031 FGD4Q96M96 766 aa20.14■□□□□ 0.82
RHOT1-209ENST00000581031 BCCIPQ9P287 314 aaKnown RBP eCLIP20.14■□□□□ 0.82
RHOT1-209ENST00000581031 VTNP04004 478 aa20.14■□□□□ 0.81
RHOT1-209ENST00000581031 PYGMP11217 842 aa20.14■□□□□ 0.81
RHOT1-209ENST00000581031 RRM1P23921 792 aa20.14■□□□□ 0.81
RHOT1-209ENST00000581031 C10orf76Q5T2E6 689 aa20.14■□□□□ 0.81
RHOT1-209ENST00000581031 XRRA1Q6P2D8 792 aa20.14■□□□□ 0.81
RHOT1-209ENST00000581031 DNERQ8NFT8 737 aa20.14■□□□□ 0.81
RHOT1-209ENST00000581031 SPIRE2Q8WWL2 714 aa20.14■□□□□ 0.81
RHOT1-209ENST00000581031 SHC3Q92529 594 aa20.14■□□□□ 0.81
RHOT1-209ENST00000581031 LENG1Q96BZ8 264 aaPredicted RBP20.14■□□□□ 0.81
RHOT1-209ENST00000581031 MFSD14AQ96MC6 490 aa20.14■□□□□ 0.81
RHOT1-209ENST00000581031 SENP7Q9BQF6 1050 aa20.14■□□□□ 0.81
RHOT1-209ENST00000581031 DNAJC17Q9NVM6 304 aaKnown RBP20.14■□□□□ 0.81
RHOT1-209ENST00000581031 CNOT8Q9UFF9 292 aaKnown RBP20.14■□□□□ 0.81
RHOT1-209ENST00000581031 TSKSQ9UJT2 592 aa20.14■□□□□ 0.81
RHOT1-209ENST00000581031 RLFQ13129 1914 aa20.14■□□□□ 0.81
RHOT1-209ENST00000581031 MCM3APO60318 1980 aa20.14■□□□□ 0.81
RHOT1-209ENST00000581031 SMIM23A6NLE4 172 aa20.13■□□□□ 0.81
RHOT1-209ENST00000581031 PIK3R2O00459 728 aa20.13■□□□□ 0.81
RHOT1-209ENST00000581031 VPS41P49754 854 aa20.13■□□□□ 0.81
RHOT1-209ENST00000581031 LAMTOR4Q0VGL1 99 aa20.13■□□□□ 0.81
RHOT1-209ENST00000581031 WDR44Q5JSH3 913 aa20.13■□□□□ 0.81
RHOT1-209ENST00000581031 MAATS1Q7Z4T9 603 aa20.13■□□□□ 0.81
RHOT1-209ENST00000581031 ZDHHC14Q8IZN3 488 aa20.13■□□□□ 0.81
RHOT1-209ENST00000581031 ZNF564Q8TBZ8 553 aaPredicted RBP20.13■□□□□ 0.81
RHOT1-209ENST00000581031 LMBR1Q8WVP7 490 aa20.13■□□□□ 0.81
RHOT1-209ENST00000581031 NRBP2Q9NSY0 501 aa20.13■□□□□ 0.81
RHOT1-209ENST00000581031 PRDM4Q9UKN5 801 aa20.13■□□□□ 0.81
RHOT1-209ENST00000581031 IQCF3P0C7M6 154 aa20.13■□□□□ 0.81
RHOT1-209ENST00000581031 PRAMEF19Q5SWL8 479 aa20.13■□□□□ 0.81
RHOT1-209ENST00000581031 IFT20Q8IY31 132 aa20.13■□□□□ 0.81
RHOT1-209ENST00000581031 PSPC1Q8WXF1 523 aaKnown RBP20.13■□□□□ 0.81
RHOT1-209ENST00000581031 ANAPC7Q9UJX3 599 aa20.13■□□□□ 0.81
RHOT1-209ENST00000581031 MYH9P35579 1960 aaKnown RBP20.13■□□□□ 0.81
RHOT1-209ENST00000581031 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.13■□□□□ 0.81
RHOT1-209ENST00000581031 DDX3YO15523 660 aaKnown RBP20.13■□□□□ 0.81
RHOT1-209ENST00000581031 ATP8B1O43520 1251 aa20.13■□□□□ 0.81
RHOT1-209ENST00000581031 RAP1GAPP47736 663 aa20.13■□□□□ 0.81
RHOT1-209ENST00000581031 UBAP2Q5T6F2 1119 aaKnown RBP20.13■□□□□ 0.81
RHOT1-209ENST00000581031 PRUNE1Q86TP1 453 aa20.13■□□□□ 0.81
RHOT1-209ENST00000581031 HES6Q96HZ4 224 aa20.13■□□□□ 0.81
RHOT1-209ENST00000581031 CPB2Q96IY4 423 aa20.13■□□□□ 0.81
RHOT1-209ENST00000581031 ZIM3Q96PE6 472 aa20.13■□□□□ 0.81
RHOT1-209ENST00000581031 STXBP5LQ9Y2K9 1186 aa20.13■□□□□ 0.81
RHOT1-209ENST00000581031 EXTL3O43909 919 aa20.12■□□□□ 0.81
RHOT1-209ENST00000581031 PSMC4P43686 418 aa20.12■□□□□ 0.81
RHOT1-209ENST00000581031 TNNC1P63316 161 aa20.12■□□□□ 0.81
RHOT1-209ENST00000581031 EEF1DP3Q658K8 133 aa20.12■□□□□ 0.81
RHOT1-209ENST00000581031 GOLGA6L1Q8N7Z2 621 aa20.12■□□□□ 0.81
RHOT1-209ENST00000581031 ATG4AQ8WYN0 398 aa20.12■□□□□ 0.81
RHOT1-209ENST00000581031 SCLT1Q96NL6 688 aa20.12■□□□□ 0.81
RHOT1-209ENST00000581031 GPR20Q99678 358 aa20.12■□□□□ 0.81
RHOT1-209ENST00000581031 ST6GALNAC4Q9H4F1 302 aa20.12■□□□□ 0.81
RHOT1-209ENST00000581031 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.12■□□□□ 0.81
RHOT1-209ENST00000581031 SNX24Q9Y343 169 aa20.12■□□□□ 0.81
RHOT1-209ENST00000581031 NFASCO94856 1347 aa20.12■□□□□ 0.81
RHOT1-209ENST00000581031 ZC3H4Q9UPT8 1303 aaKnown RBP20.12■□□□□ 0.81
RHOT1-209ENST00000581031 ADCYAP1R1P41586 468 aa20.12■□□□□ 0.81
RHOT1-209ENST00000581031 MYL6P60660 151 aa20.12■□□□□ 0.81
RHOT1-209ENST00000581031 EFCAB12Q6NXP0 572 aa20.12■□□□□ 0.81
RHOT1-209ENST00000581031 METTL7BQ6UX53 244 aa20.12■□□□□ 0.81
RHOT1-209ENST00000581031 C12orf56Q8IXR9 622 aa20.12■□□□□ 0.81
RHOT1-209ENST00000581031 SUCLA2Q9P2R7 463 aaPredicted RBP20.12■□□□□ 0.81
RHOT1-209ENST00000581031 CDH8P55286 799 aa20.11■□□□□ 0.81
RHOT1-209ENST00000581031 RDM1Q8NG50 284 aa20.11■□□□□ 0.81
RHOT1-209ENST00000581031 C1orf54Q8WWF1 131 aa20.11■□□□□ 0.81
RHOT1-209ENST00000581031 RUFY1Q96T51 708 aa20.11■□□□□ 0.81
RHOT1-209ENST00000581031 AGTPBP1Q9UPW5 1226 aa20.11■□□□□ 0.81
RHOT1-209ENST00000581031 BRCA1P38398 1863 aaKnown RBP20.11■□□□□ 0.81
RHOT1-209ENST00000581031 TMOD1P28289 359 aa20.11■□□□□ 0.81
RHOT1-209ENST00000581031 ARL2P36404 184 aa20.11■□□□□ 0.81
RHOT1-209ENST00000581031 GRM1Q13255 1194 aa20.11■□□□□ 0.81
RHOT1-209ENST00000581031 NEDD9Q14511 834 aa20.11■□□□□ 0.81
RHOT1-209ENST00000581031 DOCK1Q14185 1865 aa20.11■□□□□ 0.81
RHOT1-209ENST00000581031 DKC1O60832 514 aaKnown RBP eCLIP20.11■□□□□ 0.812e-6■■■■□ 22.6
RHOT1-209ENST00000581031 RTN2O75298 545 aa20.11■□□□□ 0.81
RHOT1-209ENST00000581031 GPC3P51654 580 aa20.11■□□□□ 0.81
RHOT1-209ENST00000581031 UBLCP1Q8WVY7 318 aaPredicted RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms