RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 SFR1Q86XK3 245 aa13.79□□□□□ -0.2
CBX1-206ENST00000581003 KRI1Q8N9T8 703 aaKnown RBP13.79□□□□□ -0.2
CBX1-206ENST00000581003 SUSD6Q92537 303 aa13.79□□□□□ -0.2
CBX1-206ENST00000581003 C18orf25Q96B23 403 aaPredicted RBP13.79□□□□□ -0.2
CBX1-206ENST00000581003 SNX27Q96L92 541 aa13.79□□□□□ -0.2
CBX1-206ENST00000581003 TCHPQ9BT92 498 aa13.79□□□□□ -0.2
CBX1-206ENST00000581003 C17orf75Q9HAS0 396 aa13.79□□□□□ -0.2
CBX1-206ENST00000581003 C11orf16Q9NQ32 467 aa13.79□□□□□ -0.2
CBX1-206ENST00000581003 KCND2Q9NZV8 630 aa13.79□□□□□ -0.2
CBX1-206ENST00000581003 ADAM28Q9UKQ2 775 aa13.79□□□□□ -0.2
CBX1-206ENST00000581003 ODF2LQ9ULJ1 636 aa13.79□□□□□ -0.2
CBX1-206ENST00000581003 RBM19Q9Y4C8 960 aaKnown RBP13.79□□□□□ -0.2
CBX1-206ENST00000581003 IRAK3Q9Y616 596 aa13.79□□□□□ -0.2
CBX1-206ENST00000581003 ZMYM2Q9UBW7 1377 aa13.79□□□□□ -0.2
CBX1-206ENST00000581003 SMIM28A0A1B0GU29 152 aa13.78□□□□□ -0.2
CBX1-206ENST00000581003 SLC26A4O43511 780 aa13.78□□□□□ -0.2
CBX1-206ENST00000581003 URODP06132 367 aa13.78□□□□□ -0.2
CBX1-206ENST00000581003 THP07101 528 aa13.78□□□□□ -0.2
CBX1-206ENST00000581003 MCF2P10911 925 aa13.78□□□□□ -0.2
CBX1-206ENST00000581003 DDIT3P35638 169 aa13.78□□□□□ -0.2
CBX1-206ENST00000581003 CLCN4P51793 760 aa13.78□□□□□ -0.2
CBX1-206ENST00000581003 CLCNKBP51801 687 aa13.78□□□□□ -0.2
CBX1-206ENST00000581003 STRN3Q13033 797 aa13.78□□□□□ -0.2
CBX1-206ENST00000581003 SHC4Q6S5L8 630 aa13.78□□□□□ -0.2
CBX1-206ENST00000581003 ALKAL1Q6UXT8 129 aa13.78□□□□□ -0.2
CBX1-206ENST00000581003 RPGRIP1Q96KN7 1286 aa13.78□□□□□ -0.2
CBX1-206ENST00000581003 COLEC11Q9BWP8 271 aa13.78□□□□□ -0.2
CBX1-206ENST00000581003 PARVGQ9HBI0 331 aa13.78□□□□□ -0.2
CBX1-206ENST00000581003 MRPL17Q9NRX2 175 aaKnown RBP13.78□□□□□ -0.2
CBX1-206ENST00000581003 CHST7Q9NS84 486 aa13.78□□□□□ -0.2
CBX1-206ENST00000581003 TBC1D7Q9P0N9 293 aa13.78□□□□□ -0.2
CBX1-206ENST00000581003 LARSQ9P2J5 1176 aaKnown RBP13.78□□□□□ -0.2
CBX1-206ENST00000581003 TUBGCP4Q9UGJ1 667 aa13.78□□□□□ -0.2
CBX1-206ENST00000581003 TBX20Q9UMR3 447 aa13.78□□□□□ -0.2
CBX1-206ENST00000581003 ZDHHC9Q9Y397 364 aa13.78□□□□□ -0.2
CBX1-206ENST00000581003 ANKRD63C9JTQ0 380 aa13.77□□□□□ -0.21
CBX1-206ENST00000581003 SPTLC2O15270 562 aa13.77□□□□□ -0.21
CBX1-206ENST00000581003 ADAM12O43184 909 aa13.77□□□□□ -0.21
CBX1-206ENST00000581003 TRAK2O60296 914 aa13.77□□□□□ -0.21
CBX1-206ENST00000581003 FAM189A1O60320 539 aa13.77□□□□□ -0.21
CBX1-206ENST00000581003 TBCAO75347 108 aaKnown RBP13.77□□□□□ -0.21
CBX1-206ENST00000581003 TADA2AO75478 443 aa13.77□□□□□ -0.21
CBX1-206ENST00000581003 TOM1L1O75674 476 aa13.77□□□□□ -0.21
CBX1-206ENST00000581003 BRD1O95696 1058 aa13.77□□□□□ -0.21
CBX1-206ENST00000581003 CXCL8P10145 99 aa13.77□□□□□ -0.21
CBX1-206ENST00000581003 KLRC2P26717 231 aa13.77□□□□□ -0.21
CBX1-206ENST00000581003 BRCC3P46736 316 aa13.77□□□□□ -0.21
CBX1-206ENST00000581003 CASP5P51878 434 aa13.77□□□□□ -0.21
CBX1-206ENST00000581003 SMTNP53814 917 aa13.77□□□□□ -0.21
CBX1-206ENST00000581003 DSG1Q02413 1049 aa13.77□□□□□ -0.21
CBX1-206ENST00000581003 KCNA1Q09470 495 aa13.77□□□□□ -0.21
CBX1-206ENST00000581003 CBX2Q14781 532 aaPredicted RBP13.77□□□□□ -0.21
CBX1-206ENST00000581003 NOLC1Q14978 699 aaKnown RBP eCLIP13.77□□□□□ -0.21
CBX1-206ENST00000581003 RRAGBQ5VZM2 374 aa13.77□□□□□ -0.21
CBX1-206ENST00000581003 TMC5Q6UXY8 1006 aa13.77□□□□□ -0.21
CBX1-206ENST00000581003 KCTD17Q8N5Z5 321 aa13.77□□□□□ -0.21
CBX1-206ENST00000581003 RIN2Q8WYP3 895 aaPredicted RBP13.77□□□□□ -0.21
CBX1-206ENST00000581003 DDX12PQ92771 950 aa13.77□□□□□ -0.21
CBX1-206ENST00000581003 CASP10Q92851 521 aa13.77□□□□□ -0.21
CBX1-206ENST00000581003 HPS3Q969F9 1004 aa13.77□□□□□ -0.21
CBX1-206ENST00000581003 DNAJC19Q96DA6 116 aa13.77□□□□□ -0.21
CBX1-206ENST00000581003 BICD1Q96G01 975 aa13.77□□□□□ -0.21
CBX1-206ENST00000581003 FBXL18Q96ME1 805 aa13.77□□□□□ -0.21
CBX1-206ENST00000581003 CCDC94Q9BW85 323 aaPredicted RBP13.77□□□□□ -0.21
CBX1-206ENST00000581003 POMKQ9H5K3 350 aa13.77□□□□□ -0.21
CBX1-206ENST00000581003 MUTYHQ9UIF7 546 aa13.77□□□□□ -0.21
CBX1-206ENST00000581003 HNRNPDLO14979 420 aaKnown RBP13.76□□□□□ -0.21
CBX1-206ENST00000581003 NR1I2O75469 434 aa13.76□□□□□ -0.21
CBX1-206ENST00000581003 CASP1P29466 404 aa13.76□□□□□ -0.21
CBX1-206ENST00000581003 STAT6P42226 847 aa13.76□□□□□ -0.21
CBX1-206ENST00000581003 GUCY2FP51841 1108 aa13.76□□□□□ -0.21
CBX1-206ENST00000581003 DNM1Q05193 864 aaKnown RBP13.76□□□□□ -0.21
CBX1-206ENST00000581003 MCL1Q07820 350 aa13.76□□□□□ -0.21
CBX1-206ENST00000581003 E2F4Q16254 413 aa13.76□□□□□ -0.21
CBX1-206ENST00000581003 SLC10A6Q3KNW5 377 aa13.76□□□□□ -0.21
CBX1-206ENST00000581003 XKR4Q5GH76 650 aa13.76□□□□□ -0.21
CBX1-206ENST00000581003 AXDND1Q5T1B0 1012 aaPredicted RBP13.76□□□□□ -0.21
CBX1-206ENST00000581003 FAM171A1Q5VUB5 890 aa13.76□□□□□ -0.21
CBX1-206ENST00000581003 ZPBP2Q6X784 338 aa13.76□□□□□ -0.21
CBX1-206ENST00000581003 CEP57Q86XR8 500 aa13.76□□□□□ -0.21
CBX1-206ENST00000581003 PALB2Q86YC2 1186 aa13.76□□□□□ -0.21
CBX1-206ENST00000581003 GLIS3Q8NEA6 775 aa13.76□□□□□ -0.21
CBX1-206ENST00000581003 EMILIN2Q9BXX0 1053 aa13.76□□□□□ -0.21
CBX1-206ENST00000581003 MAN1C1Q9NR34 630 aa13.76□□□□□ -0.21
CBX1-206ENST00000581003 STK17AQ9UEE5 414 aa13.76□□□□□ -0.21
CBX1-206ENST00000581003 CCDC39Q9UFE4 941 aa13.76□□□□□ -0.21
CBX1-206ENST00000581003 PRKAG3Q9UGI9 489 aa13.76□□□□□ -0.21
CBX1-206ENST00000581003 FAM50BQ9Y247 325 aa13.76□□□□□ -0.21
CBX1-206ENST00000581003 MYH11P35749 1972 aa13.76□□□□□ -0.21
CBX1-206ENST00000581003 SF3B1O75533 1304 aaKnown RBP eCLIP13.75□□□□□ -0.21
CBX1-206ENST00000581003 LOC730098B7Z3J9 87 aa13.75□□□□□ -0.21
CBX1-206ENST00000581003 RFPL2O75678 378 aa13.75□□□□□ -0.21
CBX1-206ENST00000581003 SRGAP2BP0DMP2 458 aa13.75□□□□□ -0.21
CBX1-206ENST00000581003 TXLNAP40222 546 aa13.75□□□□□ -0.21
CBX1-206ENST00000581003 MATR3P43243 847 aaKnown RBP eCLIP13.75□□□□□ -0.21
CBX1-206ENST00000581003 LIG4P49917 911 aa13.75□□□□□ -0.21
CBX1-206ENST00000581003 YARSP54577 528 aaKnown RBP13.75□□□□□ -0.21
CBX1-206ENST00000581003 UPP1Q16831 310 aa13.75□□□□□ -0.21
CBX1-206ENST00000581003 KIAA1841Q6NSI8 718 aa13.75□□□□□ -0.21
CBX1-206ENST00000581003 RSPO2Q6UXX9 243 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms