RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 TMEM150BA6NC51 233 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 DDAH1O94760 285 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 STBD1O95210 358 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 CYP21A2P08686 494 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 POU2F2P09086 479 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 RXRAP19793 462 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 HOXA11P31270 313 aaPredicted RBP8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 CLK2P49760 499 aaKnown RBP8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 SCNN1GP51170 649 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 PTGDRQ13258 359 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 USP41Q3LFD5 358 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 PABPC1LQ4VXU2 614 aaKnown RBP8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 RNF43Q68DV7 783 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 WWC2Q6AWC2 1192 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 Q6ZS52 159 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 CEP68Q76N32 757 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 HEATR3Q7Z4Q2 680 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 KBTBD6Q86V97 674 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 WDR5BQ86VZ2 330 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 RABGGTAQ92696 567 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 DDX27Q96GQ7 796 aaKnown RBP8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 LOXL4Q96JB6 756 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 GAD1Q99259 594 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 EPAS1Q99814 870 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 SH2D3AQ9BRG2 576 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 LZTS2Q9BRK4 669 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 MINDY3Q9H8M7 445 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 IFT122Q9HBG6 1241 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 ZNF334Q9HCZ1 680 aaPredicted RBP8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 RIC8AQ9NPQ8 531 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 CACNG4Q9UBN1 327 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 POLIQ9UNA4 740 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 GPSM3Q9Y4H4 160 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 PIAS3Q9Y6X2 628 aa8.63□□□□□ -1.03
SMARCE1-217ENST00000580654 TENM4Q6N022 2769 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 ARL5CA6NH57 179 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 C4orf47A7E2U8 309 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 ADAMTS3O15072 1205 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 FOSP01100 380 aaPredicted RBP8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 CEBPBP17676 345 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 CCNE1P24864 410 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 HOXA6P31267 233 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 ZNF76P36508 570 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 MPLP40238 635 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 MLH1P40692 756 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 TRDNQ13061 729 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 SH3PXD2AQ5TCZ1 1133 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 LIN9Q5TKA1 542 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 C19orf48Q6RUI8 117 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 PDZD3Q86UT5 571 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 ZNF410Q86VK4 478 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 RHPN2Q8IUC4 686 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 MB21D2Q8IYB1 491 aaPredicted RBP8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 CCDC82Q8N4S0 544 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 GSTCDQ8NEC7 633 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 LNX1Q8TBB1 728 aaPredicted RBP8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 SLC7A14Q8TBB6 771 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 ZFP42Q96MM3 310 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 ZNF577Q9BSK1 485 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 COLEC11Q9BWP8 271 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 BRD9Q9H8M2 597 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 TRPV5Q9NQA5 729 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 NRBP2Q9NSY0 501 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 TBC1D22BQ9NU19 505 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 GDE1Q9NZC3 331 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 ADAM28Q9UKQ2 775 aa8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 KIF26AQ9ULI4 1882 aaPredicted RBP8.62□□□□□ -1.03
SMARCE1-217ENST00000580654 NUP205Q92621 2012 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 E7EWF7 191 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 ARNTLO00327 626 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 KALRNO60229 2985 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 XYLBO75191 536 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 CYP3A4P08684 503 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 GNAQP50148 359 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 CDC42EP1Q00587 391 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 CREMQ03060 361 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 MTERF2Q49AM1 385 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 FAM78AQ5JUQ0 283 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 PRSS36Q5K4E3 855 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 AXDND1Q5T1B0 1012 aaPredicted RBP8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 KIAA1211LQ6NV74 962 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 VITQ6UXI7 678 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 RAB11FIP4Q86YS3 637 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 ADAM32Q8TC27 787 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 GAB3Q8WWW8 586 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 LENG9Q96B70 501 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 NLRP4Q96MN2 994 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 PAAF1Q9BRP4 392 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 EDEM2Q9BV94 578 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 TRMT61BQ9BVS5 477 aaKnown RBP8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 EIF2AQ9BY44 585 aaKnown RBP8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 NIFKQ9BYG3 293 aaKnown RBP8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 INO80BQ9C086 356 aaPredicted RBP8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 DIAPH3Q9NSV4 1193 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 SUCLA2Q9P2R7 463 aaPredicted RBP8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 RCAN3Q9UKA8 241 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 KLK13Q9UKR3 277 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 MRPS23Q9Y3D9 190 aaKnown RBP8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 NEUROG3Q9Y4Z2 214 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 HES2Q9Y543 173 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms