RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 SPG21Q9NZD8 308 aa9.54□□□□□ -0.88
SMG6-210ENST00000572205 KLK14Q9P0G3 267 aa9.54□□□□□ -0.88
SMG6-210ENST00000572205 PTPRDP23468 1912 aa9.54□□□□□ -0.88
SMG6-210ENST00000572205 CCDC169A6NNP5 214 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 NRP1O14786 923 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 ACTN4O43707 911 aaKnown RBP9.53□□□□□ -0.88
SMG6-210ENST00000572205 CUTAO60888 179 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 TOM1L1O75674 476 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 KIF4AO95239 1232 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 PAPLNO95428 1278 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 SSBP05455 408 aaKnown RBP eCLIP9.53□□□□□ -0.88
SMG6-210ENST00000572205 ADRB2P07550 413 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 CTSAP10619 480 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 ADSSP30520 456 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 WNT7BP56706 349 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 ADAM15Q13444 863 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 STK38Q15208 465 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 LEXMQ3ZCV2 418 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 ZC2HC1CQ53FD0 456 aaPredicted RBP9.53□□□□□ -0.88
SMG6-210ENST00000572205 TJAP1Q5JTD0 557 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 ATL3Q6DD88 541 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 MPZL3Q6UWV2 235 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 TAS1R1Q7RTX1 841 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 HAUS6Q7Z4H7 955 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 DDX53Q86TM3 631 aaKnown RBP9.53□□□□□ -0.88
SMG6-210ENST00000572205 THNSL1Q8IYQ7 743 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 ABI1Q8IZP0 508 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 EFHBQ8N7U6 833 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 AUTS2Q8WXX7 1259 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 CDK5RAP3Q96JB5 506 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 NECAB3Q96P71 396 aaPredicted RBP9.53□□□□□ -0.88
SMG6-210ENST00000572205 HERC2P3Q9BVR0 1158 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 APOL6Q9BWW8 343 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 MRPL4Q9BYD3 311 aaKnown RBP9.53□□□□□ -0.88
SMG6-210ENST00000572205 TRIM9Q9C026 710 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 PARVGQ9HBI0 331 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 CD320Q9NPF0 282 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 OLFML3Q9NRN5 406 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 CNTN3Q9P232 1028 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 TBX20Q9UMR3 447 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 COG5Q9UP83 839 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 PCDHB12Q9Y5F1 795 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 STYXL1Q9Y6J8 313 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 COL4A2P08572 1712 aa9.53□□□□□ -0.88
SMG6-210ENST00000572205 DMDP11532 3685 aa9.52□□□□□ -0.88
SMG6-210ENST00000572205 ANKRD63C9JTQ0 380 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 H3BQ06 376 aaPredicted RBP9.52□□□□□ -0.89
SMG6-210ENST00000572205 K7ENM7 598 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 K7ERI5 159 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 MCF2P10911 925 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 IL9P15248 144 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 LIG1P18858 919 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 CASP1P29466 404 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 TNFSF9P41273 254 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 NRIP1P48552 1158 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 DHX8Q14562 1220 aaKnown RBP9.52□□□□□ -0.89
SMG6-210ENST00000572205 NOLC1Q14978 699 aaKnown RBP eCLIP9.52□□□□□ -0.89
SMG6-210ENST00000572205 SLC10A6Q3KNW5 377 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 ZNF568Q3ZCX4 644 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 SEZ6Q53EL9 994 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 GLRA4Q5JXX5 417 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 RRAGBQ5VZM2 374 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 PLPP4Q5VZY2 271 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 SYCE2Q6PIF2 218 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 CRELD2Q6UXH1 353 aaPredicted RBP9.52□□□□□ -0.89
SMG6-210ENST00000572205 TMEM184AQ6ZMB5 413 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 EPM2AIP1Q7L775 607 aaPredicted RBP9.52□□□□□ -0.89
SMG6-210ENST00000572205 PDILTQ8N807 584 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 SMRP1Q8NCR6 262 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 ZSWIM2Q8NEG5 633 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 KCNG4Q8TDN1 519 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 RABGGTAQ92696 567 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 STAMQ92783 540 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 KHSRPQ92945 711 aaKnown RBP eCLIP9.52□□□□□ -0.89
SMG6-210ENST00000572205 HLA-CQ95604 372 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 HPS3Q969F9 1004 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 ZNF396Q96N95 335 aaPredicted RBP9.52□□□□□ -0.89
SMG6-210ENST00000572205 TCF25Q9BQ70 676 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 GPR62Q9BZJ7 368 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 GBP3Q9H0R5 595 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 TNMDQ9H2S6 317 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 GOLPH3LQ9H4A5 285 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 GOLGA2P5Q9HBQ8 144 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 UBN1Q9NPG3 1134 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 AAASQ9NRG9 546 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 CHST7Q9NS84 486 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 CDH22Q9UJ99 828 aa9.52□□□□□ -0.89
SMG6-210ENST00000572205 KIF26AQ9ULI4 1882 aaPredicted RBP9.52□□□□□ -0.89
SMG6-210ENST00000572205 BARX2Q9UMQ3 279 aaPredicted RBP9.52□□□□□ -0.89
SMG6-210ENST00000572205 RBM19Q9Y4C8 960 aaKnown RBP9.52□□□□□ -0.89
SMG6-210ENST00000572205 KMT2EQ8IZD2 1858 aa9.51□□□□□ -0.89
SMG6-210ENST00000572205 DENND4CQ5VZ89 1909 aa9.51□□□□□ -0.89
SMG6-210ENST00000572205 A0A0B4J269 797 aa9.51□□□□□ -0.89
SMG6-210ENST00000572205 SMIM28A0A1B0GU29 152 aa9.51□□□□□ -0.89
SMG6-210ENST00000572205 TTC26A0AVF1 554 aa9.51□□□□□ -0.89
SMG6-210ENST00000572205 TMEM189-UBE2V1I3L0A0 370 aa9.51□□□□□ -0.89
SMG6-210ENST00000572205 PER2O15055 1255 aa9.51□□□□□ -0.89
SMG6-210ENST00000572205 KLRC4O43908 158 aa9.51□□□□□ -0.89
SMG6-210ENST00000572205 CLASP2O75122 1294 aaKnown RBP9.51□□□□□ -0.89
SMG6-210ENST00000572205 SOD2P04179 222 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms