RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 TXKP42681 527 aa8.65□□□□□ -1.02
TCF4-246ENST00000570287 DNM2P50570 870 aa8.65□□□□□ -1.02
TCF4-246ENST00000570287 ZNF280AP59817 542 aaPredicted RBP8.65□□□□□ -1.02
TCF4-246ENST00000570287 ASIC1P78348 528 aa8.65□□□□□ -1.02
TCF4-246ENST00000570287 ITIH3Q06033 890 aa8.65□□□□□ -1.02
TCF4-246ENST00000570287 PCBP2Q15366 365 aaKnown RBP eCLIP8.65□□□□□ -1.02
TCF4-246ENST00000570287 MTFR1Q15390 333 aa8.65□□□□□ -1.02
TCF4-246ENST00000570287 SNCBQ16143 134 aa8.65□□□□□ -1.02
TCF4-246ENST00000570287 ALS2CLQ60I27 953 aa8.65□□□□□ -1.02
TCF4-246ENST00000570287 APOBEC3HQ6NTF7 200 aaKnown RBP8.65□□□□□ -1.02
TCF4-246ENST00000570287 FAM114A1Q8IWE2 563 aa8.65□□□□□ -1.02
TCF4-246ENST00000570287 OR8H2Q8N162 312 aa8.65□□□□□ -1.02
TCF4-246ENST00000570287 ZNF511Q8NB15 262 aa8.65□□□□□ -1.02
TCF4-246ENST00000570287 ZNF784Q8NCA9 323 aaPredicted RBP8.65□□□□□ -1.02
TCF4-246ENST00000570287 C3orf20Q8ND61 904 aa8.65□□□□□ -1.02
TCF4-246ENST00000570287 ZNF280CQ8ND82 737 aa8.65□□□□□ -1.02
TCF4-246ENST00000570287 ZNF507Q8TCN5 953 aa8.65□□□□□ -1.02
TCF4-246ENST00000570287 P2RX5Q93086 422 aa8.65□□□□□ -1.02
TCF4-246ENST00000570287 MASTLQ96GX5 879 aa8.65□□□□□ -1.02
TCF4-246ENST00000570287 CCDC17Q96LX7 622 aa8.65□□□□□ -1.02
TCF4-246ENST00000570287 SH3GL3Q99963 347 aa8.65□□□□□ -1.02
TCF4-246ENST00000570287 MRIQ9BWK5 157 aa8.65□□□□□ -1.02
TCF4-246ENST00000570287 SEZ6LQ9BYH1 1024 aa8.65□□□□□ -1.02
TCF4-246ENST00000570287 BATF3Q9NR55 127 aa8.65□□□□□ -1.02
TCF4-246ENST00000570287 LRWD1Q9UFC0 647 aa8.65□□□□□ -1.02
TCF4-246ENST00000570287 TLL1O43897 1013 aa8.65□□□□□ -1.03
TCF4-246ENST00000570287 OPA1O60313 960 aa8.65□□□□□ -1.03
TCF4-246ENST00000570287 TNFRSF8P28908 595 aa8.65□□□□□ -1.03
TCF4-246ENST00000570287 KRT9P35527 623 aa8.65□□□□□ -1.03
TCF4-246ENST00000570287 ERVK-24P63145 666 aa8.65□□□□□ -1.03
TCF4-246ENST00000570287 DOK7Q18PE1 504 aa8.65□□□□□ -1.03
TCF4-246ENST00000570287 SKIDA1Q1XH10 827 aa8.65□□□□□ -1.03
TCF4-246ENST00000570287 C6orf118Q5T5N4 469 aa8.65□□□□□ -1.03
TCF4-246ENST00000570287 SYDE1Q6ZW31 735 aaPredicted RBP8.65□□□□□ -1.03
TCF4-246ENST00000570287 SV2BQ7L1I2 683 aa8.65□□□□□ -1.03
TCF4-246ENST00000570287 TTC30AQ86WT1 665 aa8.65□□□□□ -1.03
TCF4-246ENST00000570287 NCAPG2Q86XI2 1143 aa8.65□□□□□ -1.03
TCF4-246ENST00000570287 ADGRF4Q8IZF3 695 aa8.65□□□□□ -1.03
TCF4-246ENST00000570287 FUKQ8N0W3 1084 aa8.65□□□□□ -1.03
TCF4-246ENST00000570287 MTFR1LQ9H019 292 aa8.65□□□□□ -1.03
TCF4-246ENST00000570287 RSAD1Q9HA92 442 aa8.65□□□□□ -1.03
TCF4-246ENST00000570287 FAM86C1Q9NVL1 165 aa8.65□□□□□ -1.03
TCF4-246ENST00000570287 FKBP1AP62942 108 aaKnown RBP8.64□□□□□ -1.03
TCF4-246ENST00000570287 GRB10Q13322 594 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 CCDC92Q53HC0 331 aaPredicted RBP8.64□□□□□ -1.03
TCF4-246ENST00000570287 TTC19Q6DKK2 380 aaPredicted RBP8.64□□□□□ -1.03
TCF4-246ENST00000570287 TTBK2Q6IQ55 1244 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 CYB5D1Q6P9G0 228 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 COL23A1Q86Y22 540 aaPredicted RBP8.64□□□□□ -1.03
TCF4-246ENST00000570287 ZNF295-AS1Q8N0V1 137 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 CHCHD4Q8N4Q1 142 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 CSGALNACT2Q8N6G5 542 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 FLAD1Q8NFF5 587 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 SMCR8Q8TEV9 937 aaPredicted RBP8.64□□□□□ -1.03
TCF4-246ENST00000570287 CUL5Q93034 780 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 CAVIN3Q969G5 261 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 RUSC1Q9BVN2 902 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 MXD3Q9BW11 206 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 HOMER3Q9NSC5 361 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 PVALEFA0A1B0GWK0 134 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 RNF225M0QZC1 329 aaPredicted RBP8.64□□□□□ -1.03
TCF4-246ENST00000570287 ZBTB5O15062 677 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 EDIL3O43854 480 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 TRPA1O75762 1119 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 SLC8A1P32418 973 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 LSP1P33241 339 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 CKAP4Q07065 602 aaKnown RBP8.64□□□□□ -1.03
TCF4-246ENST00000570287 STK4Q13043 487 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 TBC1D25Q3MII6 688 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 C1orf122Q6ZSJ8 110 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 OR8K1Q8NGG5 319 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 CCDC26Q8TAB7 109 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 ZNF473Q8WTR7 871 aaKnown RBP8.64□□□□□ -1.03
TCF4-246ENST00000570287 ZDHHC15Q96MV8 337 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 PNMA5Q96PV4 448 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 GLT8D2Q9H1C3 349 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 SUV39H2Q9H5I1 410 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 ELP3Q9H9T3 547 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 BLOC1S4Q9NUP1 217 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 RABGEF1Q9UJ41 708 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 CAPN11Q9UMQ6 739 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.64□□□□□ -1.03
TCF4-246ENST00000570287 COL11A2P13942 1736 aaPredicted RBP8.64□□□□□ -1.03
TCF4-246ENST00000570287 MYH4Q9Y623 1939 aa8.64□□□□□ -1.03
TCF4-246ENST00000570287 PLSCR1O15162 318 aa8.63□□□□□ -1.03
TCF4-246ENST00000570287 SLC37A4O43826 429 aa8.63□□□□□ -1.03
TCF4-246ENST00000570287 MGRN1O60291 552 aa8.63□□□□□ -1.03
TCF4-246ENST00000570287 TDP2O95551 362 aa8.63□□□□□ -1.03
TCF4-246ENST00000570287 IL2RAP01589 272 aa8.63□□□□□ -1.03
TCF4-246ENST00000570287 CHKAP35790 457 aa8.63□□□□□ -1.03
TCF4-246ENST00000570287 ADCY1Q08828 1119 aa8.63□□□□□ -1.03
TCF4-246ENST00000570287 IFFO1Q0D2I5 559 aa8.63□□□□□ -1.03
TCF4-246ENST00000570287 TRAF1Q13077 416 aa8.63□□□□□ -1.03
TCF4-246ENST00000570287 AGAP9Q5VTM2 703 aa8.63□□□□□ -1.03
TCF4-246ENST00000570287 ANKRD40Q6AI12 368 aa8.63□□□□□ -1.03
TCF4-246ENST00000570287 POTEAQ6S8J7 498 aa8.63□□□□□ -1.03
TCF4-246ENST00000570287 UNC13DQ70J99 1090 aa8.63□□□□□ -1.03
TCF4-246ENST00000570287 CLEC10AQ8IUN9 316 aa8.63□□□□□ -1.03
TCF4-246ENST00000570287 NKAPQ8N5F7 415 aaKnown RBP8.63□□□□□ -1.03
TCF4-246ENST00000570287 LARP4BQ92615 738 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms