RNA–Protein interactions for RNA: ENST00000566640.1

SIN3A-207, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 944 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-207ENST00000566640 AGPAT5Q9NUQ2 364 aa7.78□□□□□ -1.16
SIN3A-207ENST00000566640 FAM105AQ9NUU6 356 aa7.78□□□□□ -1.16
SIN3A-207ENST00000566640 TBC1D13Q9NVG8 400 aa7.78□□□□□ -1.16
SIN3A-207ENST00000566640 SUCLA2Q9P2R7 463 aaPredicted RBP7.78□□□□□ -1.16
SIN3A-207ENST00000566640 PCDHA12Q9UN75 941 aa7.78□□□□□ -1.16
SIN3A-207ENST00000566640 PIN4Q9Y237 131 aaKnown RBP7.78□□□□□ -1.16
SIN3A-207ENST00000566640 NR2E1Q9Y466 385 aa7.78□□□□□ -1.16
SIN3A-207ENST00000566640 PCDHB6Q9Y5E3 794 aa7.78□□□□□ -1.16
SIN3A-207ENST00000566640 PLXNA4Q9HCM2 1894 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.77□□□□□ -1.17
SIN3A-207ENST00000566640 ZC3H11AO75152 810 aaKnown RBP eCLIP7.77□□□□□ -1.17
SIN3A-207ENST00000566640 CXCL14O95715 111 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 SP100P23497 879 aaPredicted RBP7.77□□□□□ -1.17
SIN3A-207ENST00000566640 HOXA11P31270 313 aaPredicted RBP7.77□□□□□ -1.17
SIN3A-207ENST00000566640 SLC11A1P49279 550 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 MCM2P49736 904 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 DNM2P50570 870 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 RAB27AP51159 221 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 AFF1P51825 1210 aaKnown RBP7.77□□□□□ -1.17
SIN3A-207ENST00000566640 KCNA1Q09470 495 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 GIT2Q14161 759 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 PTPN14Q15678 1187 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 ZRSR1Q15695 479 aaKnown RBP7.77□□□□□ -1.17
SIN3A-207ENST00000566640 MAP7D1Q3KQU3 841 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 NOMO2Q5JPE7 1267 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 UBXN11Q5T124 520 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 TWF2Q6IBS0 349 aaKnown RBP7.77□□□□□ -1.17
SIN3A-207ENST00000566640 CES5AQ6NT32 575 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 GLB1LQ6UWU2 654 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 AGMOQ6ZNB7 445 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 MRPL10Q7Z7H8 261 aaKnown RBP7.77□□□□□ -1.17
SIN3A-207ENST00000566640 ZNF280BQ86YH2 543 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 ZDHHC14Q8IZN3 488 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 KREMEN2Q8NCW0 462 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 AUTS2Q8WXX7 1259 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 SLC7A3Q8WY07 619 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 RIPOR3Q96MK2 946 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 MTMR9Q96QG7 549 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 JPH2Q9BR39 696 aaPredicted RBP7.77□□□□□ -1.17
SIN3A-207ENST00000566640 DHX33Q9H6R0 707 aaKnown RBP7.77□□□□□ -1.17
SIN3A-207ENST00000566640 ZSWIM4Q9H7M6 989 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 DZANK1Q9NVP4 752 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 DNAJB4Q9UDY4 337 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 DOLKQ9UPQ8 538 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 SORCS3Q9UPU3 1222 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 PPME1Q9Y570 386 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.77□□□□□ -1.17
SIN3A-207ENST00000566640 PCDHB11Q9Y5F2 797 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 COL4A3BPQ9Y5P4 624 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 ZNF318Q5VUA4 2279 aa7.77□□□□□ -1.17
SIN3A-207ENST00000566640 CFAP54Q96N23 3096 aa7.76□□□□□ -1.17
SIN3A-207ENST00000566640 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.76□□□□□ -1.17
SIN3A-207ENST00000566640 PP2D1A8MPX8 630 aa7.76□□□□□ -1.17
SIN3A-207ENST00000566640 INPPL1O15357 1258 aa7.76□□□□□ -1.17
SIN3A-207ENST00000566640 ST8SIA5O15466 376 aa7.76□□□□□ -1.17
SIN3A-207ENST00000566640 DKC1O60832 514 aaKnown RBP eCLIP7.76□□□□□ -1.17
SIN3A-207ENST00000566640 MED24O75448 989 aa7.76□□□□□ -1.17
SIN3A-207ENST00000566640 DDHD2O94830 711 aa7.76□□□□□ -1.17
SIN3A-207ENST00000566640 EFEMP2O95967 443 aa7.76□□□□□ -1.17
SIN3A-207ENST00000566640 WEE2P0C1S8 567 aa7.76□□□□□ -1.17
SIN3A-207ENST00000566640 SRGAP2CP0DJJ0 459 aa7.76□□□□□ -1.17
SIN3A-207ENST00000566640 EPCAMP16422 314 aa7.76□□□□□ -1.17
SIN3A-207ENST00000566640 U2AF2P26368 475 aaKnown RBP eCLIP7.76□□□□□ -1.17
SIN3A-207ENST00000566640 MTHFRP42898 656 aa7.76□□□□□ -1.17
SIN3A-207ENST00000566640 TOB1P50616 345 aaPredicted RBP7.76□□□□□ -1.17
SIN3A-207ENST00000566640 WDR4P57081 412 aaKnown RBP7.76□□□□□ -1.17
SIN3A-207ENST00000566640 MTMR3Q13615 1198 aa7.76□□□□□ -1.17
SIN3A-207ENST00000566640 NCOA4Q13772 614 aa7.76□□□□□ -1.17
SIN3A-207ENST00000566640 LONRF3Q496Y0 759 aa7.76□□□□□ -1.17
SIN3A-207ENST00000566640 RARS2Q5T160 578 aaKnown RBP7.76□□□□□ -1.17
SIN3A-207ENST00000566640 KANK3Q6NY19 840 aa7.76□□□□□ -1.17
SIN3A-207ENST00000566640 MAEAQ7L5Y9 396 aa7.76□□□□□ -1.17
SIN3A-207ENST00000566640 CATSPER4Q7RTX7 472 aa7.76□□□□□ -1.17
SIN3A-207ENST00000566640 C4orf19Q8IY42 314 aa7.76□□□□□ -1.17
SIN3A-207ENST00000566640 UBALD2Q8IYN6 164 aa7.76□□□□□ -1.17
SIN3A-207ENST00000566640 RNF168Q8IYW5 571 aaPredicted RBP7.76□□□□□ -1.17
SIN3A-207ENST00000566640 C12orf76Q8N812 135 aaPredicted RBP7.76□□□□□ -1.17
SIN3A-207ENST00000566640 SNX29Q8TEQ0 813 aa7.76□□□□□ -1.17
SIN3A-207ENST00000566640 KLF16Q9BXK1 252 aaPredicted RBP7.76□□□□□ -1.17
SIN3A-207ENST00000566640 SMOC2Q9H3U7 446 aa7.76□□□□□ -1.17
SIN3A-207ENST00000566640 MINDY3Q9H8M7 445 aa7.76□□□□□ -1.17
SIN3A-207ENST00000566640 PGPEP1Q9NXJ5 209 aa7.76□□□□□ -1.17
SIN3A-207ENST00000566640 USTQ9Y2C2 406 aa7.76□□□□□ -1.17
SIN3A-207ENST00000566640 PCDHB2Q9Y5E7 798 aa7.76□□□□□ -1.17
SIN3A-207ENST00000566640 MYO15AQ9UKN7 3530 aa7.75□□□□□ -1.17
SIN3A-207ENST00000566640 PROB1E7EW31 1015 aa7.75□□□□□ -1.17
SIN3A-207ENST00000566640 GAS2O43903 313 aaKnown RBP7.75□□□□□ -1.17
SIN3A-207ENST00000566640 SLITRK3O94933 977 aa7.75□□□□□ -1.17
SIN3A-207ENST00000566640 ZIC2O95409 532 aaPredicted RBP7.75□□□□□ -1.17
SIN3A-207ENST00000566640 PAPLNO95428 1278 aa7.75□□□□□ -1.17
SIN3A-207ENST00000566640 ASGR2P07307 311 aa7.75□□□□□ -1.17
SIN3A-207ENST00000566640 CCT6AP40227 531 aaKnown RBP7.75□□□□□ -1.17
SIN3A-207ENST00000566640 SCTRP47872 440 aa7.75□□□□□ -1.17
SIN3A-207ENST00000566640 TRAPPC10P48553 1259 aa7.75□□□□□ -1.17
SIN3A-207ENST00000566640 CLCN4P51793 760 aa7.75□□□□□ -1.17
SIN3A-207ENST00000566640 LAMTOR4Q0VGL1 99 aa7.75□□□□□ -1.17
SIN3A-207ENST00000566640 BMS1Q14692 1282 aaKnown RBP7.75□□□□□ -1.17
SIN3A-207ENST00000566640 ATAT1Q5SQI0 421 aa7.75□□□□□ -1.17
SIN3A-207ENST00000566640 LARP1BQ659C4 914 aaKnown RBP7.75□□□□□ -1.17
SIN3A-207ENST00000566640 HAUS3Q68CZ6 603 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms