RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 GPR65Q8IYL9 337 aa26.09■■□□□ 1.77
CDR2-202ENST00000561630 FOXD4L4Q8WXT5 416 aaPredicted RBP26.09■■□□□ 1.77
CDR2-202ENST00000561630 RXFP1Q9HBX9 757 aa26.09■■□□□ 1.77
CDR2-202ENST00000561630 DZANK1Q9NVP4 752 aa26.09■■□□□ 1.77
CDR2-202ENST00000561630 ANKFY1Q9P2R3 1169 aa26.09■■□□□ 1.77
CDR2-202ENST00000561630 TFIP11Q9UBB9 837 aaKnown RBP26.09■■□□□ 1.77
CDR2-202ENST00000561630 SMIM28A0A1B0GU29 152 aa26.08■■□□□ 1.77
CDR2-202ENST00000561630 SPTLC2O15270 562 aa26.08■■□□□ 1.77
CDR2-202ENST00000561630 PPP6R2O75170 966 aa26.08■■□□□ 1.77
CDR2-202ENST00000561630 KIF4AO95239 1232 aa26.08■■□□□ 1.77
CDR2-202ENST00000561630 KLRC2P26717 231 aa26.08■■□□□ 1.77
CDR2-202ENST00000561630 CLCN4P51793 760 aa26.08■■□□□ 1.77
CDR2-202ENST00000561630 MCL1Q07820 350 aa26.08■■□□□ 1.77
CDR2-202ENST00000561630 NOLC1Q14978 699 aaKnown RBP eCLIP26.08■■□□□ 1.77
CDR2-202ENST00000561630 GLRA4Q5JXX5 417 aa26.08■■□□□ 1.77
CDR2-202ENST00000561630 KIAA1841Q6NSI8 718 aa26.08■■□□□ 1.77
CDR2-202ENST00000561630 CCDC73Q6ZRK6 1079 aa26.08■■□□□ 1.77
CDR2-202ENST00000561630 ACAP3Q96P50 834 aa26.08■■□□□ 1.77
CDR2-202ENST00000561630 FIZ1Q96SL8 496 aa26.08■■□□□ 1.77
CDR2-202ENST00000561630 APOL5Q9BWW9 433 aa26.08■■□□□ 1.77
CDR2-202ENST00000561630 ZHX3Q9H4I2 956 aa26.08■■□□□ 1.77
CDR2-202ENST00000561630 TBX20Q9UMR3 447 aa26.08■■□□□ 1.77
CDR2-202ENST00000561630 SF3B1O75533 1304 aaKnown RBP eCLIP26.08■■□□□ 1.773e-6■■■■■ 137.9
CDR2-202ENST00000561630 K7ENM7 598 aa26.07■■□□□ 1.76
CDR2-202ENST00000561630 CLDN3O15551 220 aa26.07■■□□□ 1.76
CDR2-202ENST00000561630 YEATS4O95619 227 aa26.07■■□□□ 1.76
CDR2-202ENST00000561630 F13A1P00488 732 aa26.07■■□□□ 1.76
CDR2-202ENST00000561630 HARSP12081 509 aaKnown RBP26.07■■□□□ 1.76
CDR2-202ENST00000561630 ITIH3Q06033 890 aa26.07■■□□□ 1.76
CDR2-202ENST00000561630 SV2BQ7L1I2 683 aa26.07■■□□□ 1.76
CDR2-202ENST00000561630 SPRYD3Q8NCJ5 442 aa26.07■■□□□ 1.76
CDR2-202ENST00000561630 B3GALT6Q96L58 329 aa26.07■■□□□ 1.76
CDR2-202ENST00000561630 SNX27Q96L92 541 aa26.07■■□□□ 1.76
CDR2-202ENST00000561630 PHF7Q9BWX1 381 aaPredicted RBP26.07■■□□□ 1.76
CDR2-202ENST00000561630 ADAM7Q9H2U9 754 aa26.07■■□□□ 1.76
CDR2-202ENST00000561630 TDRD15B5MCY1 1934 aaKnown RBP26.06■■□□□ 1.76
CDR2-202ENST00000561630 A0A087X0B3 334 aa26.06■■□□□ 1.76
CDR2-202ENST00000561630 TEX28O15482 410 aa26.06■■□□□ 1.76
CDR2-202ENST00000561630 ABCD1P33897 745 aa26.06■■□□□ 1.76
CDR2-202ENST00000561630 PKP1Q13835 747 aa26.06■■□□□ 1.76
CDR2-202ENST00000561630 CBX2Q14781 532 aaPredicted RBP26.06■■□□□ 1.76
CDR2-202ENST00000561630 BICD1Q96G01 975 aa26.06■■□□□ 1.76
CDR2-202ENST00000561630 PANK2Q9BZ23 570 aa26.06■■□□□ 1.76
CDR2-202ENST00000561630 EPHX3Q9H6B9 360 aa26.06■■□□□ 1.76
CDR2-202ENST00000561630 PI4K2BG5E9Z4 385 aa26.05■■□□□ 1.76
CDR2-202ENST00000561630 PIGRP01833 764 aa26.05■■□□□ 1.76
CDR2-202ENST00000561630 ADH1AP07327 375 aa26.05■■□□□ 1.76
CDR2-202ENST00000561630 KCNE1P15382 129 aa26.05■■□□□ 1.76
CDR2-202ENST00000561630 STAT6P42226 847 aa26.05■■□□□ 1.76
CDR2-202ENST00000561630 GTF2BQ00403 316 aa26.05■■□□□ 1.76
CDR2-202ENST00000561630 CES5AQ6NT32 575 aa26.05■■□□□ 1.76
CDR2-202ENST00000561630 DYMQ7RTS9 669 aa26.05■■□□□ 1.76
CDR2-202ENST00000561630 HASPINQ8TF76 798 aa26.05■■□□□ 1.76
CDR2-202ENST00000561630 DDX12PQ92771 950 aa26.05■■□□□ 1.76
CDR2-202ENST00000561630 FBXL18Q96ME1 805 aa26.05■■□□□ 1.76
CDR2-202ENST00000561630 UROC1Q96N76 676 aa26.05■■□□□ 1.76
CDR2-202ENST00000561630 ZMAT2Q96NC0 199 aaKnown RBP26.05■■□□□ 1.76
CDR2-202ENST00000561630 HAPLN2Q9GZV7 340 aa26.05■■□□□ 1.76
CDR2-202ENST00000561630 ST6GALNAC4Q9H4F1 302 aa26.05■■□□□ 1.76
CDR2-202ENST00000561630 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.05■■□□□ 1.76
CDR2-202ENST00000561630 SLC38A7Q9NVC3 462 aa26.05■■□□□ 1.76
CDR2-202ENST00000561630 CNTN3Q9P232 1028 aa26.05■■□□□ 1.76
CDR2-202ENST00000561630 MYMKA6NI61 221 aa26.04■■□□□ 1.76
CDR2-202ENST00000561630 LOC730098B7Z3J9 87 aa26.04■■□□□ 1.76
CDR2-202ENST00000561630 TMEM189-UBE2V1I3L0A0 370 aa26.04■■□□□ 1.76
CDR2-202ENST00000561630 HNRNPDLO14979 420 aaKnown RBP26.04■■□□□ 1.76
CDR2-202ENST00000561630 MEFVO15553 781 aaPredicted RBP26.04■■□□□ 1.76
CDR2-202ENST00000561630 NMT1P30419 496 aaKnown RBP26.04■■□□□ 1.76
CDR2-202ENST00000561630 LIG4P49917 911 aa26.04■■□□□ 1.76
CDR2-202ENST00000561630 CLCNKBP51801 687 aa26.04■■□□□ 1.76
CDR2-202ENST00000561630 UPP1Q16831 310 aa26.04■■□□□ 1.76
CDR2-202ENST00000561630 DCLRE1AQ6PJP8 1040 aa26.04■■□□□ 1.76
CDR2-202ENST00000561630 C12orf76Q8N812 135 aaPredicted RBP26.04■■□□□ 1.76
CDR2-202ENST00000561630 RIN2Q8WYP3 895 aaPredicted RBP26.04■■□□□ 1.76
CDR2-202ENST00000561630 C1QTNF1Q9BXJ1 281 aa26.04■■□□□ 1.76
CDR2-202ENST00000561630 FNIP2Q9P278 1114 aa26.04■■□□□ 1.76
CDR2-202ENST00000561630 SOX4Q06945 474 aaPredicted RBP26.03■■□□□ 1.76
CDR2-202ENST00000561630 ELAVL2Q12926 359 aaKnown RBP26.03■■□□□ 1.76
CDR2-202ENST00000561630 SLC10A6Q3KNW5 377 aa26.03■■□□□ 1.76
CDR2-202ENST00000561630 FOXD4L6Q3SYB3 417 aaPredicted RBP26.03■■□□□ 1.76
CDR2-202ENST00000561630 SEZ6Q53EL9 994 aa26.03■■□□□ 1.76
CDR2-202ENST00000561630 RTP2Q5QGT7 225 aa26.03■■□□□ 1.76
CDR2-202ENST00000561630 RARS2Q5T160 578 aaKnown RBP26.03■■□□□ 1.76
CDR2-202ENST00000561630 FAM171A1Q5VUB5 890 aa26.03■■□□□ 1.76
CDR2-202ENST00000561630 ATL3Q6DD88 541 aa26.03■■□□□ 1.76
CDR2-202ENST00000561630 FOXD4L3Q6VB84 417 aaPredicted RBP26.03■■□□□ 1.76
CDR2-202ENST00000561630 MAP4K3Q8IVH8 894 aa26.03■■□□□ 1.76
CDR2-202ENST00000561630 DNAJC19Q96DA6 116 aa26.03■■□□□ 1.76
CDR2-202ENST00000561630 NECTIN4Q96NY8 510 aa26.03■■□□□ 1.76
CDR2-202ENST00000561630 TTPALQ9BTX7 342 aa26.03■■□□□ 1.76
CDR2-202ENST00000561630 GOLGA2P5Q9HBQ8 144 aa26.03■■□□□ 1.76
CDR2-202ENST00000561630 CDH22Q9UJ99 828 aa26.03■■□□□ 1.76
CDR2-202ENST00000561630 B3GAT3O94766 335 aa26.02■■□□□ 1.76
CDR2-202ENST00000561630 C1RP00736 705 aa26.02■■□□□ 1.76
CDR2-202ENST00000561630 CLTAP09496 248 aa26.02■■□□□ 1.76
CDR2-202ENST00000561630 MATR3P43243 847 aaKnown RBP eCLIP26.02■■□□□ 1.76
CDR2-202ENST00000561630 CREMQ03060 361 aa26.02■■□□□ 1.76
CDR2-202ENST00000561630 SFR1Q86XK3 245 aa26.02■■□□□ 1.76
CDR2-202ENST00000561630 PDILTQ8N807 584 aa26.02■■□□□ 1.76
CDR2-202ENST00000561630 DDX27Q96GQ7 796 aaKnown RBP26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms