RNA–Protein interactions for RNA: ENST00000561078.5

SPG21-213, Transcript of SPG21, maspardin, humanhuman

TSL 5

Gene SPG21, Length 1,520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-213ENST00000561078 CCDC40Q4G0X9 1142 aa16.29■□□□□ 0.2
SPG21-213ENST00000561078 ZC2HC1CQ53FD0 456 aaPredicted RBP16.29■□□□□ 0.2
SPG21-213ENST00000561078 SPECC1LQ69YQ0 1117 aa16.29■□□□□ 0.2
SPG21-213ENST00000561078 TWF2Q6IBS0 349 aaKnown RBP16.29■□□□□ 0.2
SPG21-213ENST00000561078 HS2ST1Q7LGA3 356 aa16.29■□□□□ 0.2
SPG21-213ENST00000561078 APTXQ7Z2E3 356 aaKnown RBP16.29■□□□□ 0.2
SPG21-213ENST00000561078 KLHL23Q8NBE8 558 aa16.29■□□□□ 0.2
SPG21-213ENST00000561078 GOLGA5Q8TBA6 731 aa16.29■□□□□ 0.2
SPG21-213ENST00000561078 SPPL3Q8TCT6 385 aa16.29■□□□□ 0.2
SPG21-213ENST00000561078 TUBGCP2Q9BSJ2 902 aa16.29■□□□□ 0.2
SPG21-213ENST00000561078 RTN4Q9NQC3 1192 aaKnown RBP16.29■□□□□ 0.2
SPG21-213ENST00000561078 RNF19AQ9NV58 838 aa16.29■□□□□ 0.2
SPG21-213ENST00000561078 INTS13Q9NVM9 706 aa16.29■□□□□ 0.2
SPG21-213ENST00000561078 TRAF3IP3Q9Y228 551 aa16.29■□□□□ 0.2
SPG21-213ENST00000561078 PIN4Q9Y237 131 aaKnown RBP16.29■□□□□ 0.2
SPG21-213ENST00000561078 ITGB1P05556 798 aa16.28■□□□□ 0.2
SPG21-213ENST00000561078 BMP1P13497 986 aa16.28■□□□□ 0.2
SPG21-213ENST00000561078 NR2F2P24468 414 aa16.28■□□□□ 0.2
SPG21-213ENST00000561078 NCBP1Q09161 790 aaKnown RBP16.28■□□□□ 0.2
SPG21-213ENST00000561078 ADAM9Q13443 819 aa16.28■□□□□ 0.2
SPG21-213ENST00000561078 LRRC55Q6ZSA7 311 aa16.28■□□□□ 0.2
SPG21-213ENST00000561078 LRRC43Q8N309 656 aa16.28■□□□□ 0.2
SPG21-213ENST00000561078 PPP2R3CQ969Q6 453 aa16.28■□□□□ 0.2
SPG21-213ENST00000561078 ACCSQ96QU6 501 aa16.28■□□□□ 0.2
SPG21-213ENST00000561078 FIZ1Q96SL8 496 aa16.28■□□□□ 0.2
SPG21-213ENST00000561078 MRPL9Q9BYD2 267 aaKnown RBP16.28■□□□□ 0.2
SPG21-213ENST00000561078 POLR3FQ9H1D9 316 aaPredicted RBP16.28■□□□□ 0.2
SPG21-213ENST00000561078 CWH43Q9H720 699 aa16.28■□□□□ 0.2
SPG21-213ENST00000561078 TMEM206Q9H813 350 aa16.28■□□□□ 0.2
SPG21-213ENST00000561078 FAM105AQ9NUU6 356 aa16.28■□□□□ 0.2
SPG21-213ENST00000561078 LGALS16A8MUM7 142 aa16.27■□□□□ 0.2
SPG21-213ENST00000561078 H0YCG3 227 aa16.27■□□□□ 0.2
SPG21-213ENST00000561078 NRDCO43847 1150 aa16.27■□□□□ 0.2
SPG21-213ENST00000561078 NR3C1P04150 777 aa16.27■□□□□ 0.2
SPG21-213ENST00000561078 ATF7P17544 494 aaPredicted RBP16.27■□□□□ 0.2
SPG21-213ENST00000561078 IBSPP21815 317 aaPredicted RBP16.27■□□□□ 0.2
SPG21-213ENST00000561078 MSNP26038 577 aaKnown RBP16.27■□□□□ 0.2
SPG21-213ENST00000561078 HOXA11P31270 313 aaPredicted RBP16.27■□□□□ 0.2
SPG21-213ENST00000561078 UBXN1Q04323 297 aa16.27■□□□□ 0.2
SPG21-213ENST00000561078 CAMK1Q14012 370 aa16.27■□□□□ 0.2
SPG21-213ENST00000561078 TCEAL5Q5H9L2 206 aa16.27■□□□□ 0.2
SPG21-213ENST00000561078 SPOUT1Q5T280 376 aaKnown RBP16.27■□□□□ 0.2
SPG21-213ENST00000561078 PDE12Q6L8Q7 609 aaKnown RBP16.27■□□□□ 0.2
SPG21-213ENST00000561078 HAUS6Q7Z4H7 955 aa16.27■□□□□ 0.2
SPG21-213ENST00000561078 CCDC150Q8NCX0 1101 aa16.27■□□□□ 0.2
SPG21-213ENST00000561078 PGBD4Q96DM1 585 aa16.27■□□□□ 0.2
SPG21-213ENST00000561078 PABPC5Q96DU9 382 aaKnown RBP16.27■□□□□ 0.2
SPG21-213ENST00000561078 CCDC51Q96ER9 411 aa16.27■□□□□ 0.2
SPG21-213ENST00000561078 GBP3Q9H0R5 595 aa16.27■□□□□ 0.2
SPG21-213ENST00000561078 ST6GALNAC4Q9H4F1 302 aa16.27■□□□□ 0.2
SPG21-213ENST00000561078 UBE2ZQ9H832 354 aaPredicted RBP16.27■□□□□ 0.2
SPG21-213ENST00000561078 MINDY3Q9H8M7 445 aa16.27■□□□□ 0.2
SPG21-213ENST00000561078 ALG13Q9NP73 1137 aaKnown RBP16.27■□□□□ 0.2
SPG21-213ENST00000561078 KMT5AQ9NQR1 393 aa16.27■□□□□ 0.2
SPG21-213ENST00000561078 LZTS1Q9Y250 596 aa16.27■□□□□ 0.2
SPG21-213ENST00000561078 TRANK1O15050 2925 aa16.27■□□□□ 0.19
SPG21-213ENST00000561078 NLRC5Q86WI3 1866 aa16.27■□□□□ 0.19
SPG21-213ENST00000561078 SLC16A4O15374 487 aa16.26■□□□□ 0.19
SPG21-213ENST00000561078 TEX33O43247 280 aa16.26■□□□□ 0.19
SPG21-213ENST00000561078 ERLIN2O94905 339 aa16.26■□□□□ 0.19
SPG21-213ENST00000561078 TPM1P09493 284 aa16.26■□□□□ 0.19
SPG21-213ENST00000561078 ABCD1P33897 745 aa16.26■□□□□ 0.19
SPG21-213ENST00000561078 HOXD13P35453 343 aa16.26■□□□□ 0.19
SPG21-213ENST00000561078 PPM1AP35813 382 aa16.26■□□□□ 0.19
SPG21-213ENST00000561078 NCKAP1LP55160 1127 aa16.26■□□□□ 0.19
SPG21-213ENST00000561078 PLCB3Q01970 1234 aa16.26■□□□□ 0.19
SPG21-213ENST00000561078 TFF2Q03403 129 aa16.26■□□□□ 0.19
SPG21-213ENST00000561078 PPP2R5AQ15172 486 aa16.26■□□□□ 0.19
SPG21-213ENST00000561078 MAN2A1Q16706 1144 aa16.26■□□□□ 0.19
SPG21-213ENST00000561078 CLLU1OSQ5K130 101 aa16.26■□□□□ 0.19
SPG21-213ENST00000561078 FKBP15Q5T1M5 1219 aa16.26■□□□□ 0.19
SPG21-213ENST00000561078 MRPL10Q7Z7H8 261 aaKnown RBP16.26■□□□□ 0.19
SPG21-213ENST00000561078 ZSCAN30Q86W11 494 aa16.26■□□□□ 0.19
SPG21-213ENST00000561078 COLGALT1Q8NBJ5 622 aa16.26■□□□□ 0.19
SPG21-213ENST00000561078 SPIRE2Q8WWL2 714 aa16.26■□□□□ 0.19
SPG21-213ENST00000561078 HVCN1Q96D96 273 aa16.26■□□□□ 0.19
SPG21-213ENST00000561078 EXOC7Q9UPT5 735 aa16.26■□□□□ 0.19
SPG21-213ENST00000561078 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.26■□□□□ 0.191e-8■□□□□ 9.3
SPG21-213ENST00000561078 PPP1R37O75864 691 aa16.25■□□□□ 0.19
SPG21-213ENST00000561078 GLRA2P23416 452 aa16.25■□□□□ 0.19
SPG21-213ENST00000561078 NPTX2P47972 431 aa16.25■□□□□ 0.19
SPG21-213ENST00000561078 KCNA1Q09470 495 aa16.25■□□□□ 0.19
SPG21-213ENST00000561078 CAPSQ13938 189 aa16.25■□□□□ 0.19
SPG21-213ENST00000561078 PUS10Q3MIT2 529 aaKnown RBP16.25■□□□□ 0.19
SPG21-213ENST00000561078 LEXMQ3ZCV2 418 aa16.25■□□□□ 0.19
SPG21-213ENST00000561078 PPFIBP1Q86W92 1011 aa16.25■□□□□ 0.19
SPG21-213ENST00000561078 ZC3H3Q8IXZ2 948 aaKnown RBP16.25■□□□□ 0.19
SPG21-213ENST00000561078 RNF169Q8NCN4 708 aa16.25■□□□□ 0.19
SPG21-213ENST00000561078 POF1BQ8WVV4 589 aa16.25■□□□□ 0.19
SPG21-213ENST00000561078 ZNF830Q96NB3 372 aaPredicted RBP16.25■□□□□ 0.19
SPG21-213ENST00000561078 UBN1Q9NPG3 1134 aa16.25■□□□□ 0.19
SPG21-213ENST00000561078 PUF60Q9UHX1 559 aaKnown RBP16.25■□□□□ 0.19
SPG21-213ENST00000561078 ZKSCAN5Q9Y2L8 839 aa16.25■□□□□ 0.19
SPG21-213ENST00000561078 PCDHB2Q9Y5E7 798 aa16.25■□□□□ 0.19
SPG21-213ENST00000561078 ZMYM2Q9UBW7 1377 aa16.25■□□□□ 0.19
SPG21-213ENST00000561078 UNC80Q8N2C7 3258 aa16.25■□□□□ 0.19
SPG21-213ENST00000561078 FGF18O76093 207 aa16.24■□□□□ 0.19
SPG21-213ENST00000561078 EPB41P11171 864 aaKnown RBP16.24■□□□□ 0.19
SPG21-213ENST00000561078 GTF2BQ00403 316 aa16.24■□□□□ 0.19
SPG21-213ENST00000561078 PTPN21Q16825 1174 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms