RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 NCOA5Q9HCD5 579 aaKnown RBP5.32□□□□□ -1.56
ATXN3-231ENST00000554994 PDGFCQ9NRA1 345 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 TRMT13Q9NUP7 481 aaKnown RBP5.32□□□□□ -1.56
ATXN3-231ENST00000554994 RBM28Q9NW13 759 aaKnown RBP5.32□□□□□ -1.56
ATXN3-231ENST00000554994 RTEL1Q9NZ71 1219 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 SEPT3Q9UH03 358 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 NRBP1Q9UHY1 535 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 CD207Q9UJ71 328 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 DIS3Q9Y2L1 958 aaKnown RBP5.32□□□□□ -1.56
ATXN3-231ENST00000554994 ASH1LQ9NR48 2969 aaKnown RBP5.32□□□□□ -1.56
ATXN3-231ENST00000554994 SIP14410 1827 aa5.32□□□□□ -1.56
ATXN3-231ENST00000554994 OTOGLQ3ZCN5 2332 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 WDR19Q8NEZ3 1342 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 DNAJC25-GNG10A0A024R161 153 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 SMCO2A6NFE2 343 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 LOC730098B7Z3J9 87 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 CTAGE5O15320 804 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 CYTH3O43739 400 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 PPP1R11O60927 126 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-231ENST00000554994 DUSP11O75319 330 aaKnown RBP5.31□□□□□ -1.56
ATXN3-231ENST00000554994 ECEL1O95672 775 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 PDGFAP04085 211 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 CYP11A1P05108 521 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 MYL3P08590 195 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 SP100P23497 879 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-231ENST00000554994 PDIA3P30101 505 aaKnown RBP5.31□□□□□ -1.56
ATXN3-231ENST00000554994 ZNF76P36508 570 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 WDR5P61964 334 aaKnown RBP5.31□□□□□ -1.56
ATXN3-231ENST00000554994 PRKCQQ04759 706 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 PCDH1Q08174 1060 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 STXBP2Q15833 593 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 PTPROQ16827 1216 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 HP1BP3Q5SSJ5 553 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-231ENST00000554994 IQSEC1Q6DN90 963 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 CPLX2Q6PUV4 134 aaKnown RBP5.31□□□□□ -1.56
ATXN3-231ENST00000554994 USP17L6PQ6QN14 398 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 CILP2Q8IUL8 1156 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 FBXO16Q8IX29 292 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-231ENST00000554994 NECAB1Q8N987 351 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 FAM133AQ8N9E0 248 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 SYTL5Q8TDW5 730 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-231ENST00000554994 NSUN6Q8TEA1 469 aaKnown RBP5.31□□□□□ -1.56
ATXN3-231ENST00000554994 KCNB2Q92953 911 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 PHKBQ93100 1093 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 LIN37Q96GY3 246 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-231ENST00000554994 MAP3K14Q99558 947 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 CORO1BQ9BR76 489 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 MTA3Q9BTC8 594 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 TRAIPQ9BWF2 469 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 C22orf23Q9BZE7 217 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 WDR11Q9BZH6 1224 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 BHLHE41Q9C0J9 482 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-231ENST00000554994 SMOC2Q9H3U7 446 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 NSUN3Q9H649 340 aaKnown RBP5.31□□□□□ -1.56
ATXN3-231ENST00000554994 PSTPIP2Q9H939 334 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 VAV3Q9UKW4 847 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 U3KQE9 123 aa5.31□□□□□ -1.56
ATXN3-231ENST00000554994 TET1Q8NFU7 2136 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 MYH11P35749 1972 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-231ENST00000554994 ZNF503-AS2A6NEH8 195 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 TXNP10599 105 aaKnown RBP5.3□□□□□ -1.56
ATXN3-231ENST00000554994 SMARCA1P28370 1054 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 CCND2P30279 289 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 AK2P54819 239 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 GJA9P57773 515 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 NLRP5P59047 1200 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 HYAL1Q12794 435 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 GPM6BQ13491 265 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 TOB2Q14106 344 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-231ENST00000554994 ANKRD1Q15327 319 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 ANGPT1Q15389 498 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 UBE2SQ16763 222 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 PTPN21Q16825 1174 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 LY6KQ17RY6 165 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 SLC35G1Q2M3R5 365 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 TCTN1Q2MV58 587 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 TMEM63BQ5T3F8 832 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 JAKMIP3Q5VZ66 844 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 MAMDC4Q6UXC1 1216 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 SYDE1Q6ZW31 735 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-231ENST00000554994 TMTC3Q6ZXV5 915 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 SGMS1Q86VZ5 419 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 C1QL4Q86Z23 238 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 LURAP1LQ8IV03 231 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 MSL3Q8N5Y2 521 aaKnown RBP5.3□□□□□ -1.56
ATXN3-231ENST00000554994 SLC43A3Q8NBI5 491 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 RGS22Q8NE09 1264 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 BHLHE22Q8NFJ8 381 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-231ENST00000554994 DNERQ8NFT8 737 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 OR6J1Q8NGC5 347 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 COPS5Q92905 334 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 HRASLS5Q96KN8 279 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 SPZ1Q9BXG8 430 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 TM6SF1Q9BZW5 370 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 UPF3AQ9H1J1 476 aaKnown RBP5.3□□□□□ -1.56
ATXN3-231ENST00000554994 FAM53CQ9NYF3 392 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 CRIM1Q9NZV1 1036 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 COL20A1Q9P218 1284 aa5.3□□□□□ -1.56
ATXN3-231ENST00000554994 FOXD3Q9UJU5 478 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms