RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 CDH6P55285 790 aa14.74□□□□□ -0.05
VTI1B-204ENST00000554659 EFHC2Q5JST6 749 aa14.74□□□□□ -0.05
VTI1B-204ENST00000554659 USP38Q8NB14 1042 aa14.74□□□□□ -0.05
VTI1B-204ENST00000554659 RIN2Q8WYP3 895 aaPredicted RBP14.74□□□□□ -0.05
VTI1B-204ENST00000554659 MYMKA6NI61 221 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 PHF20L1A8MW92 1017 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 APOL1O14791 398 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 DUOXA2Q1HG44 320 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 PRPF38AQ8NAV1 312 aaKnown RBP14.73□□□□□ -0.05
VTI1B-204ENST00000554659 NOA1Q8NC60 698 aaKnown RBP14.73□□□□□ -0.05
VTI1B-204ENST00000554659 RBM15Q96T37 977 aaKnown RBP eCLIP14.73□□□□□ -0.051e-9■■■■■ 31.5
VTI1B-204ENST00000554659 FAM49AQ9H0Q0 323 aaPredicted RBP14.73□□□□□ -0.05
VTI1B-204ENST00000554659 LZTS1Q9Y250 596 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 FAM196BA6NMK8 535 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 TMEM253P0C7T8 217 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 KCNA4P22459 653 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 IFNA8P32881 189 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 ATP6V1E1P36543 226 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 EIF3EP60228 445 aaKnown RBP14.73□□□□□ -0.05
VTI1B-204ENST00000554659 CCDC85BQ15834 202 aaPredicted RBP14.73□□□□□ -0.05
VTI1B-204ENST00000554659 DNAL1Q4LDG9 190 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 EP400NLQ6ZTU2 488 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 RFX8Q6ZV50 586 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 CYFIP2Q96F07 1278 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 RANBP17Q9H2T7 1088 aaKnown RBP14.73□□□□□ -0.05
VTI1B-204ENST00000554659 ARPP19P56211 112 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 JAMLQ86YT9 394 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 REXO1L1PQ8IX06 675 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 THEM5Q8N1Q8 247 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 NR1H4Q96RI1 486 aaPredicted RBP14.73□□□□□ -0.05
VTI1B-204ENST00000554659 ERGIC2Q96RQ1 377 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 HSPBP1Q9NZL4 362 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 PSMC3IPQ9P2W1 217 aaPredicted RBP14.73□□□□□ -0.05
VTI1B-204ENST00000554659 PCDHA10Q9Y5I2 948 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 FAM47DPA6NHR8 397 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 TRIM66O15016 1216 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 FAM107AO95990 144 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 ADRA2BP18089 450 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 P3H1Q32P28 736 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 KIAA2013Q8IYS2 634 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 NDUFAF2Q8N183 169 aa14.73□□□□□ -0.05
VTI1B-204ENST00000554659 QTRT2Q9H974 415 aaKnown RBP14.73□□□□□ -0.05
VTI1B-204ENST00000554659 TMEM247A6NEH6 219 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 LONRF1Q17RB8 773 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 USP49Q70CQ1 688 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 TRPM8Q7Z2W7 1104 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 NAF1Q96HR8 494 aaKnown RBP14.72□□□□□ -0.05
VTI1B-204ENST00000554659 REEP2Q9BRK0 252 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 PPP1R3GB7ZBB8 358 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 CCND1P24385 295 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 HDAC4P56524 1084 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 AP1B1Q10567 949 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 CUL3Q13618 768 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 LRRC31Q6UY01 552 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 ZNF710Q8N1W2 664 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 IFT43Q96FT9 208 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 SPATA17Q96L03 361 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 TRAF3IP3Q9Y228 551 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 ECE2O60344 883 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 ANP32DO95626 131 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 POU5F1BQ06416 359 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 ZNF543Q08ER8 600 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 KYAT1Q16773 422 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 KIAA1841Q6NSI8 718 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 IL17RAQ96F46 866 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 MAP3K14Q99558 947 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 TSSK1BQ9BXA7 367 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 FAM129AQ9BZQ8 928 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 DHX35Q9H5Z1 703 aaKnown RBP14.72□□□□□ -0.05
VTI1B-204ENST00000554659 MTMR4Q9NYA4 1195 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 PNMA3Q9UL41 463 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 FHOD1Q9Y613 1164 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 NFKBIAP25963 317 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 YWHABP31946 246 aaKnown RBP14.72□□□□□ -0.05
VTI1B-204ENST00000554659 MRPS15P82914 257 aaKnown RBP14.72□□□□□ -0.05
VTI1B-204ENST00000554659 NSUN2Q08J23 767 aaKnown RBP eCLIP14.72□□□□□ -0.05
VTI1B-204ENST00000554659 ANKMY2Q8IV38 441 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 SENP7Q9BQF6 1050 aa14.72□□□□□ -0.05
VTI1B-204ENST00000554659 STXBP3O00186 592 aa14.71□□□□□ -0.05
VTI1B-204ENST00000554659 KDM1AO60341 852 aa14.71□□□□□ -0.05
VTI1B-204ENST00000554659 AARSP49588 968 aaKnown RBP eCLIP14.71□□□□□ -0.05
VTI1B-204ENST00000554659 CARSP49589 748 aaKnown RBP14.71□□□□□ -0.05
VTI1B-204ENST00000554659 EFNA5P52803 228 aa14.71□□□□□ -0.05
VTI1B-204ENST00000554659 C1orf228Q6PIY5 440 aa14.71□□□□□ -0.05
VTI1B-204ENST00000554659 BRINP3Q76B58 766 aa14.71□□□□□ -0.05
VTI1B-204ENST00000554659 WDR35Q9P2L0 1181 aa14.71□□□□□ -0.05
VTI1B-204ENST00000554659 HERC5Q9UII4 1024 aaKnown RBP14.71□□□□□ -0.05
VTI1B-204ENST00000554659 IQSEC2Q5JU85 1478 aa14.71□□□□□ -0.05
VTI1B-204ENST00000554659 RABGAP1LQ5R372 815 aa14.71□□□□□ -0.05
VTI1B-204ENST00000554659 SZRD1Q7Z422 152 aa14.71□□□□□ -0.05
VTI1B-204ENST00000554659 RIBC1Q8N443 379 aaPredicted RBP14.71□□□□□ -0.05
VTI1B-204ENST00000554659 KCTD17Q8N5Z5 321 aa14.71□□□□□ -0.05
VTI1B-204ENST00000554659 TTLL6Q8N841 843 aa14.71□□□□□ -0.05
VTI1B-204ENST00000554659 OR9Q1Q8NGQ5 310 aa14.71□□□□□ -0.05
VTI1B-204ENST00000554659 SNX19Q92543 992 aa14.71□□□□□ -0.05
VTI1B-204ENST00000554659 ANKS1AQ92625 1134 aa14.71□□□□□ -0.05
VTI1B-204ENST00000554659 SH3GL3Q99963 347 aa14.71□□□□□ -0.05
VTI1B-204ENST00000554659 RGL1Q9NZL6 768 aa14.71□□□□□ -0.05
VTI1B-204ENST00000554659 MMP10P09238 476 aa14.71□□□□□ -0.05
VTI1B-204ENST00000554659 PTGISQ16647 500 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms