RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 DZANK1Q9NVP4 752 aa7.87□□□□□ -1.15
ATXN3-224ENST00000554040 IGSF9Q9P2J2 1179 aa7.87□□□□□ -1.15
ATXN3-224ENST00000554040 PCDHA2Q9Y5H9 948 aa7.87□□□□□ -1.15
ATXN3-224ENST00000554040 KAT6AQ92794 2004 aa7.86□□□□□ -1.15
ATXN3-224ENST00000554040 ASPMQ8IZT6 3477 aa7.86□□□□□ -1.15
ATXN3-224ENST00000554040 FRMPD4Q14CM0 1322 aa7.86□□□□□ -1.15
ATXN3-224ENST00000554040 DENND3A2RUS2 1198 aa7.86□□□□□ -1.15
ATXN3-224ENST00000554040 ZBTB5O15062 677 aa7.86□□□□□ -1.15
ATXN3-224ENST00000554040 NARSO43776 548 aaKnown RBP7.86□□□□□ -1.15
ATXN3-224ENST00000554040 CXCL14O95715 111 aa7.86□□□□□ -1.15
ATXN3-224ENST00000554040 FGFR1P11362 822 aa7.86□□□□□ -1.15
ATXN3-224ENST00000554040 INSRRP14616 1297 aa7.86□□□□□ -1.15
ATXN3-224ENST00000554040 CDC25BP30305 580 aa7.86□□□□□ -1.15
ATXN3-224ENST00000554040 PPM1AP35813 382 aa7.86□□□□□ -1.15
ATXN3-224ENST00000554040 NT5C2P49902 561 aa7.86□□□□□ -1.15
ATXN3-224ENST00000554040 COL9A2Q14055 689 aaPredicted RBP7.86□□□□□ -1.15
ATXN3-224ENST00000554040 BMS1Q14692 1282 aaKnown RBP7.86□□□□□ -1.15
ATXN3-224ENST00000554040 XRRA1Q6P2D8 792 aa7.86□□□□□ -1.15
ATXN3-224ENST00000554040 NLRX1Q86UT6 975 aa7.86□□□□□ -1.15
ATXN3-224ENST00000554040 IQCA1Q86XH1 822 aa7.86□□□□□ -1.15
ATXN3-224ENST00000554040 CHAMP1Q96JM3 812 aa7.86□□□□□ -1.15
ATXN3-224ENST00000554040 SPACA7Q96KW9 195 aa7.86□□□□□ -1.15
ATXN3-224ENST00000554040 ZNF558Q96NG5 402 aa7.86□□□□□ -1.15
ATXN3-224ENST00000554040 CASD1Q96PB1 797 aa7.86□□□□□ -1.15
ATXN3-224ENST00000554040 RTKNQ9BST9 563 aa7.86□□□□□ -1.15
ATXN3-224ENST00000554040 TMEM117Q9H0C3 514 aa7.86□□□□□ -1.15
ATXN3-224ENST00000554040 ELAC1Q9H777 363 aaKnown RBP7.86□□□□□ -1.15
ATXN3-224ENST00000554040 TMEM161AQ9NX61 479 aa7.86□□□□□ -1.15
ATXN3-224ENST00000554040 SPG21Q9NZD8 308 aa7.86□□□□□ -1.15
ATXN3-224ENST00000554040 DLGAP2Q9P1A6 1054 aa7.86□□□□□ -1.15
ATXN3-224ENST00000554040 KANSL3Q9P2N6 904 aa7.86□□□□□ -1.15
ATXN3-224ENST00000554040 SALL4Q9UJQ4 1053 aa7.86□□□□□ -1.15
ATXN3-224ENST00000554040 RAXQ9Y2V3 346 aa7.86□□□□□ -1.15
ATXN3-224ENST00000554040 NOC2LQ9Y3T9 749 aaKnown RBP7.86□□□□□ -1.15
ATXN3-224ENST00000554040 ZMYM6O95789 1325 aa7.85□□□□□ -1.15
ATXN3-224ENST00000554040 SMIM35A0A1B0GVV1 85 aa7.85□□□□□ -1.15
ATXN3-224ENST00000554040 KLRF2D3W0D1 207 aa7.85□□□□□ -1.15
ATXN3-224ENST00000554040 GPR182O15218 404 aa7.85□□□□□ -1.15
ATXN3-224ENST00000554040 DDX3YO15523 660 aaKnown RBP7.85□□□□□ -1.15
ATXN3-224ENST00000554040 KINO60870 393 aaKnown RBP7.85□□□□□ -1.15
ATXN3-224ENST00000554040 ATP9AO75110 1047 aa7.85□□□□□ -1.15
ATXN3-224ENST00000554040 RPS6KA5O75582 802 aa7.85□□□□□ -1.15
ATXN3-224ENST00000554040 DCNP07585 359 aaKnown RBP7.85□□□□□ -1.15
ATXN3-224ENST00000554040 KCNA2P16389 499 aa7.85□□□□□ -1.15
ATXN3-224ENST00000554040 PBX3P40426 434 aa7.85□□□□□ -1.15
ATXN3-224ENST00000554040 CD97P48960 835 aa7.85□□□□□ -1.15
ATXN3-224ENST00000554040 TRAF1Q13077 416 aa7.85□□□□□ -1.15
ATXN3-224ENST00000554040 MCMDC2Q4G0Z9 681 aa7.85□□□□□ -1.15
ATXN3-224ENST00000554040 SPECC1Q5M775 1068 aa7.85□□□□□ -1.15
ATXN3-224ENST00000554040 ODR4Q5SWX8 454 aa7.85□□□□□ -1.15
ATXN3-224ENST00000554040 PHLDB3Q6NSJ2 640 aa7.85□□□□□ -1.15
ATXN3-224ENST00000554040 TMC5Q6UXY8 1006 aa7.85□□□□□ -1.15
ATXN3-224ENST00000554040 CCDC149Q6ZUS6 474 aa7.85□□□□□ -1.15
ATXN3-224ENST00000554040 ACAD11Q709F0 780 aa7.85□□□□□ -1.15
ATXN3-224ENST00000554040 GPR149Q86SP6 731 aa7.85□□□□□ -1.15
ATXN3-224ENST00000554040 TBC1D10CQ8IV04 446 aa7.85□□□□□ -1.15
ATXN3-224ENST00000554040 ENAHQ8N8S7 591 aaPredicted RBP7.85□□□□□ -1.15
ATXN3-224ENST00000554040 FEZF2Q8TBJ5 459 aa7.85□□□□□ -1.15
ATXN3-224ENST00000554040 SLC22A17Q8WUG5 538 aa7.85□□□□□ -1.15
ATXN3-224ENST00000554040 TNPO1Q92973 898 aaKnown RBP7.85□□□□□ -1.15
ATXN3-224ENST00000554040 FAM46AQ96IP4 442 aaKnown RBP7.85□□□□□ -1.15
ATXN3-224ENST00000554040 TBC1D17Q9HA65 648 aa7.85□□□□□ -1.15
ATXN3-224ENST00000554040 RALYQ9UKM9 306 aaKnown RBP7.85□□□□□ -1.15
ATXN3-224ENST00000554040 ST3GAL5Q9UNP4 418 aa7.85□□□□□ -1.15
ATXN3-224ENST00000554040 SIT1Q9Y3P8 196 aa7.85□□□□□ -1.15
ATXN3-224ENST00000554040 ZFYVE26Q68DK2 2539 aa7.84□□□□□ -1.15
ATXN3-224ENST00000554040 PLXNA4Q9HCM2 1894 aa7.84□□□□□ -1.15
ATXN3-224ENST00000554040 MED26O95402 600 aa7.84□□□□□ -1.15
ATXN3-224ENST00000554040 EPCAMP16422 314 aa7.84□□□□□ -1.15
ATXN3-224ENST00000554040 LMNB2Q03252 620 aa7.84□□□□□ -1.15
ATXN3-224ENST00000554040 NONOQ15233 471 aaKnown RBP eCLIP7.84□□□□□ -1.15
ATXN3-224ENST00000554040 PCNX4Q63HM2 1172 aa7.84□□□□□ -1.15
ATXN3-224ENST00000554040 XKR5Q6UX68 686 aa7.84□□□□□ -1.15
ATXN3-224ENST00000554040 CABP7Q86V35 215 aa7.84□□□□□ -1.15
ATXN3-224ENST00000554040 MAML2Q8IZL2 1156 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-224ENST00000554040 SLC39A11Q8N1S5 342 aa7.84□□□□□ -1.15
ATXN3-224ENST00000554040 LRRC43Q8N309 656 aa7.84□□□□□ -1.15
ATXN3-224ENST00000554040 SLC44A3Q8N4M1 653 aa7.84□□□□□ -1.15
ATXN3-224ENST00000554040 C1orf127Q8N9H9 656 aa7.84□□□□□ -1.15
ATXN3-224ENST00000554040 TMEM87AQ8NBN3 555 aa7.84□□□□□ -1.15
ATXN3-224ENST00000554040 HELQQ8TDG4 1101 aa7.84□□□□□ -1.15
ATXN3-224ENST00000554040 OTUD7AQ8TE49 926 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-224ENST00000554040 UBASH3BQ8TF42 649 aa7.84□□□□□ -1.15
ATXN3-224ENST00000554040 KLHDC7BQ96G42 594 aa7.84□□□□□ -1.15
ATXN3-224ENST00000554040 CDHR1Q96JP9 859 aa7.84□□□□□ -1.15
ATXN3-224ENST00000554040 PCYT2Q99447 389 aa7.84□□□□□ -1.15
ATXN3-224ENST00000554040 CHRDQ9H2X0 955 aa7.84□□□□□ -1.15
ATXN3-224ENST00000554040 RNF19AQ9NV58 838 aa7.84□□□□□ -1.15
ATXN3-224ENST00000554040 ZSWIM5Q9P217 1185 aa7.84□□□□□ -1.15
ATXN3-224ENST00000554040 NCDNQ9UBB6 729 aa7.84□□□□□ -1.15
ATXN3-224ENST00000554040 MAD2L2Q9UI95 211 aa7.84□□□□□ -1.15
ATXN3-224ENST00000554040 CA14Q9ULX7 337 aa7.84□□□□□ -1.15
ATXN3-224ENST00000554040 GINS2Q9Y248 185 aa7.84□□□□□ -1.15
ATXN3-224ENST00000554040 IRAK3Q9Y616 596 aa7.84□□□□□ -1.15
ATXN3-224ENST00000554040 NEDD4P46934 1319 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-224ENST00000554040 A6NHS1 94 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 CCER2I3L3R5 266 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 ZNF213O14771 459 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 GLULP15104 373 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms