RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 TRAPPC11Q7Z392 1133 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 CTAGE6Q86UF2 777 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 CTAGE4Q8IX94 777 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 PARD3BQ8TEW8 1205 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 POMGNT1Q8WZA1 660 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 DHX38Q92620 1227 aaKnown RBP7.91□□□□□ -1.14
ATXN3-221ENST00000553498 RUBCNQ92622 972 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 CEP89Q96ST8 783 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 GPR20Q99678 358 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 CBWD1Q9BRT8 395 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 CARD6Q9BX69 1037 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 NFKBIZQ9BYH8 718 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 TXNRD2Q9NNW7 524 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 GPRC5CQ9NQ84 441 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 DNAJC12Q9UKB3 198 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 FHOD1Q9Y613 1164 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 WDR90Q96KV7 1748 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 COL1A2P08123 1366 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 IGKV6-21A0A0C4DH24 114 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 A0A0U1RQG5 324 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-221ENST00000553498 MAGEB2O15479 319 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 ADCY3O60266 1144 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 GH1P01241 217 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 PLEKP08567 350 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-221ENST00000553498 ACTN1P12814 892 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 ATP4AP20648 1035 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 GLRA2P23416 452 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 ADSSP30520 456 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 RAB15P59190 212 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 CDC42EP1Q00587 391 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 CYP27A1Q02318 531 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 GCNT1Q02742 428 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 GFPT1Q06210 699 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-221ENST00000553498 CYP24A1Q07973 514 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 PSMD6Q15008 389 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 TCEAL1Q15170 157 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 CLUL1Q15846 466 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 FAM110CQ1W6H9 321 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 KIAA0753Q2KHM9 967 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 CBWD6Q4V339 395 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 CBWD3Q5JTY5 395 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 ZNF484Q5JVG2 852 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 CBWD5Q5RIA9 395 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 C6orf118Q5T5N4 469 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 CDCA2Q69YH5 1023 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-221ENST00000553498 CCDC70Q6NSX1 233 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 ALKBH5Q6P6C2 394 aaKnown RBP7.9□□□□□ -1.14
ATXN3-221ENST00000553498 DLK2Q6UY11 383 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 MOB2Q70IA6 237 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 ZNF572Q7Z3I7 529 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-221ENST00000553498 KSR1Q8IVT5 923 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 ZBTB8OSQ8IWT0 167 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 SYCE1Q8N0S2 351 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 FBXL13Q8NEE6 735 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 LMO3Q8TAP4 145 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 PSPC1Q8WXF1 523 aaKnown RBP7.9□□□□□ -1.14
ATXN3-221ENST00000553498 BSNDQ8WZ55 320 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 GLG1Q92896 1179 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 BICD1Q96G01 975 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 FGD4Q96M96 766 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 SPATA33Q96N06 139 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 PCYT2Q99447 389 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 TSEN34Q9BSV6 310 aaKnown RBP7.9□□□□□ -1.14
ATXN3-221ENST00000553498 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.9□□□□□ -1.14
ATXN3-221ENST00000553498 LACRTQ9GZZ8 138 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 BCAS3Q9H6U6 928 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 POLD4Q9HCU8 107 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 ERAP1Q9NZ08 941 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 ADAMTS1Q9UHI8 967 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 NAGPAQ9UK23 515 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 NENFQ9UMX5 172 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 SNX12Q9UMY4 172 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 HYOU1Q9Y4L1 999 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 PCDHGC5Q9Y5F6 944 aa7.9□□□□□ -1.14
ATXN3-221ENST00000553498 A0A087X0T9 212 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 MACROD2A1Z1Q3 448 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 TMEM150BA6NC51 233 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 A6NJR5 290 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 BTBD19C9JJ37 291 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 ANKRD63C9JTQ0 380 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 PPFIA4O75335 1185 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 TOM1L1O75674 476 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 H2AFZP0C0S5 128 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 FAM228BP0C875 321 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 TRIM49P0CI25 452 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 TRIM49CP0CI26 452 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 TXNP10599 105 aaKnown RBP7.89□□□□□ -1.15
ATXN3-221ENST00000553498 H2AFXP16104 143 aaPredicted RBP7.89□□□□□ -1.15
ATXN3-221ENST00000553498 INHBEP58166 350 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 BPIFB4P59827 614 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 SP4Q02446 784 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 PPP3CAQ08209 521 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 NFX1Q12986 1120 aaKnown RBP7.89□□□□□ -1.15
ATXN3-221ENST00000553498 GRB14Q14449 540 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 DRAP1Q14919 205 aaPredicted RBP7.89□□□□□ -1.15
ATXN3-221ENST00000553498 BRD3Q15059 726 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 KYAT1Q16773 422 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 C1orf220Q5T0J3 134 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 LCE2CQ5TA81 110 aa7.89□□□□□ -1.15
ATXN3-221ENST00000553498 TREML4Q6UXN2 200 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms