RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 KCNQ5Q9NR82 932 aa18.74■□□□□ 0.59
SYNE3-202ENST00000553340 MAPK13O15264 365 aa18.74■□□□□ 0.59
SYNE3-202ENST00000553340 ECM2O94769 699 aaPredicted RBP18.74■□□□□ 0.59
SYNE3-202ENST00000553340 ATF2P15336 505 aa18.74■□□□□ 0.59
SYNE3-202ENST00000553340 IVDP26440 423 aa18.74■□□□□ 0.59
SYNE3-202ENST00000553340 CDR2Q01850 454 aa18.74■□□□□ 0.59
SYNE3-202ENST00000553340 RNF43Q68DV7 783 aa18.74■□□□□ 0.59
SYNE3-202ENST00000553340 SPICE1Q8N0Z3 855 aa18.74■□□□□ 0.59
SYNE3-202ENST00000553340 GRAMD1AQ96CP6 724 aa18.74■□□□□ 0.59
SYNE3-202ENST00000553340 CHST7Q9NS84 486 aa18.74■□□□□ 0.59
SYNE3-202ENST00000553340 DNAJC17Q9NVM6 304 aaKnown RBP18.74■□□□□ 0.59
SYNE3-202ENST00000553340 ANAPC5Q9UJX4 755 aa18.74■□□□□ 0.59
SYNE3-202ENST00000553340 RBBP6Q7Z6E9 1792 aaKnown RBP18.74■□□□□ 0.59
SYNE3-202ENST00000553340 FOXO6A8MYZ6 492 aa18.73■□□□□ 0.59
SYNE3-202ENST00000553340 DIAPH2O60879 1101 aa18.73■□□□□ 0.59
SYNE3-202ENST00000553340 ARP10275 920 aa18.73■□□□□ 0.59
SYNE3-202ENST00000553340 SKIV2L2P42285 1042 aaKnown RBP18.73■□□□□ 0.59
SYNE3-202ENST00000553340 STAT2P52630 851 aa18.73■□□□□ 0.59
SYNE3-202ENST00000553340 ATP11AP98196 1134 aa18.73■□□□□ 0.59
SYNE3-202ENST00000553340 STRN3Q13033 797 aa18.73■□□□□ 0.59
SYNE3-202ENST00000553340 PLEKHO2Q8TD55 490 aa18.73■□□□□ 0.59
SYNE3-202ENST00000553340 TRIM6Q9C030 488 aaPredicted RBP18.73■□□□□ 0.59
SYNE3-202ENST00000553340 LGALS13Q9UHV8 139 aa18.73■□□□□ 0.59
SYNE3-202ENST00000553340 SMCHD1A6NHR9 2005 aa18.73■□□□□ 0.59
SYNE3-202ENST00000553340 LY75O60449 1722 aa18.73■□□□□ 0.59
SYNE3-202ENST00000553340 CDH16O75309 829 aa18.73■□□□□ 0.59
SYNE3-202ENST00000553340 CHRM1P11229 460 aaPredicted RBP18.73■□□□□ 0.59
SYNE3-202ENST00000553340 PAX7P23759 505 aa18.73■□□□□ 0.59
SYNE3-202ENST00000553340 ADCY8P40145 1251 aa18.73■□□□□ 0.59
SYNE3-202ENST00000553340 RBM5P52756 815 aaKnown RBP eCLIP18.73■□□□□ 0.59
SYNE3-202ENST00000553340 TRIP13Q15645 432 aaPredicted RBP18.73■□□□□ 0.59
SYNE3-202ENST00000553340 PPP1R21Q6ZMI0 780 aa18.73■□□□□ 0.59
SYNE3-202ENST00000553340 ATG4AQ8WYN0 398 aa18.73■□□□□ 0.59
SYNE3-202ENST00000553340 RMDN2Q96LZ7 410 aa18.73■□□□□ 0.59
SYNE3-202ENST00000553340 CCDC77Q9BR77 488 aa18.73■□□□□ 0.59
SYNE3-202ENST00000553340 MOV10L1Q9BXT6 1211 aaKnown RBP18.73■□□□□ 0.59
SYNE3-202ENST00000553340 NINJ2Q9NZG7 142 aa18.73■□□□□ 0.59
SYNE3-202ENST00000553340 ADGRA3Q8IWK6 1321 aa18.73■□□□□ 0.59
SYNE3-202ENST00000553340 KLRG2A4D1S0 409 aaPredicted RBP18.72■□□□□ 0.59
SYNE3-202ENST00000553340 GH2P01242 217 aa18.72■□□□□ 0.59
SYNE3-202ENST00000553340 MTFR1Q15390 333 aa18.72■□□□□ 0.59
SYNE3-202ENST00000553340 RBM26Q5T8P6 1007 aaKnown RBP18.72■□□□□ 0.59
SYNE3-202ENST00000553340 ACAD10Q6JQN1 1059 aa18.72■□□□□ 0.59
SYNE3-202ENST00000553340 B3GNT9Q6UX72 402 aa18.72■□□□□ 0.59
SYNE3-202ENST00000553340 KIFAP3Q92845 792 aa18.72■□□□□ 0.59
SYNE3-202ENST00000553340 TBK1Q9UHD2 729 aa18.72■□□□□ 0.59
SYNE3-202ENST00000553340 PCDHAC2Q9Y5I4 1007 aa18.72■□□□□ 0.59
SYNE3-202ENST00000553340 LOXHD1Q8IVV2 1947 aa18.72■□□□□ 0.59
SYNE3-202ENST00000553340 A8MUI8 341 aa18.72■□□□□ 0.59
SYNE3-202ENST00000553340 IPO5O00410 1097 aaKnown RBP18.72■□□□□ 0.59
SYNE3-202ENST00000553340 VIL1P09327 827 aaKnown RBP18.72■□□□□ 0.59
SYNE3-202ENST00000553340 CCNB1P14635 433 aa18.72■□□□□ 0.59
SYNE3-202ENST00000553340 MAPK4P31152 587 aa18.72■□□□□ 0.59
SYNE3-202ENST00000553340 ACVR2BQ13705 512 aa18.72■□□□□ 0.59
SYNE3-202ENST00000553340 SRRM1Q8IYB3 904 aaKnown RBP18.72■□□□□ 0.59
SYNE3-202ENST00000553340 CYP4X1Q8N118 509 aa18.72■□□□□ 0.59
SYNE3-202ENST00000553340 FAXDC2Q96IV6 333 aa18.72■□□□□ 0.59
SYNE3-202ENST00000553340 ANAPC7Q9UJX3 599 aa18.72■□□□□ 0.59
SYNE3-202ENST00000553340 NAALADL1Q9UQQ1 740 aa18.72■□□□□ 0.59
SYNE3-202ENST00000553340 SORBS3O60504 671 aa18.71■□□□□ 0.59
SYNE3-202ENST00000553340 CCDC15Q0P6D6 951 aa18.71■□□□□ 0.59
SYNE3-202ENST00000553340 CGB2Q6NT52 195 aa18.71■□□□□ 0.59
SYNE3-202ENST00000553340 KIAA0825Q8IV33 1275 aa18.71■□□□□ 0.59
SYNE3-202ENST00000553340 ZSWIM2Q8NEG5 633 aa18.71■□□□□ 0.59
SYNE3-202ENST00000553340 ATL2Q8NHH9 583 aa18.71■□□□□ 0.59
SYNE3-202ENST00000553340 FBF1Q8TES7 1133 aa18.71■□□□□ 0.59
SYNE3-202ENST00000553340 DCLK3Q9C098 648 aa18.71■□□□□ 0.59
SYNE3-202ENST00000553340 ACTL7BQ9Y614 415 aa18.71■□□□□ 0.59
SYNE3-202ENST00000553340 A0A1W2PRG0 241 aa18.71■□□□□ 0.59
SYNE3-202ENST00000553340 POTEJP0CG39 1038 aa18.71■□□□□ 0.59
SYNE3-202ENST00000553340 PLS3P13797 630 aa18.71■□□□□ 0.59
SYNE3-202ENST00000553340 FAM212AQ96EL1 285 aa18.71■□□□□ 0.59
SYNE3-202ENST00000553340 PITPNM3Q9BZ71 974 aa18.71■□□□□ 0.59
SYNE3-202ENST00000553340 TRIM33Q9UPN9 1127 aa18.71■□□□□ 0.59
SYNE3-202ENST00000553340 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.71■□□□□ 0.59
SYNE3-202ENST00000553340 NEBLO76041 1014 aa18.7■□□□□ 0.58
SYNE3-202ENST00000553340 UNC5CO95185 931 aa18.7■□□□□ 0.58
SYNE3-202ENST00000553340 SNRPFP62306 86 aaKnown RBP18.7■□□□□ 0.58
SYNE3-202ENST00000553340 IL9RQ01113 521 aa18.7■□□□□ 0.58
SYNE3-202ENST00000553340 STAT4Q14765 748 aa18.7■□□□□ 0.58
SYNE3-202ENST00000553340 BZW1Q7L1Q6 419 aaKnown RBP18.7■□□□□ 0.58
SYNE3-202ENST00000553340 ERICH1Q86X53 443 aa18.7■□□□□ 0.58
SYNE3-202ENST00000553340 ANKRD35Q8N283 1001 aa18.7■□□□□ 0.58
SYNE3-202ENST00000553340 BBOF1Q8ND07 529 aa18.7■□□□□ 0.58
SYNE3-202ENST00000553340 SEMA4DQ92854 862 aa18.7■□□□□ 0.58
SYNE3-202ENST00000553340 ZNF570Q96NI8 536 aa18.7■□□□□ 0.58
SYNE3-202ENST00000553340 RAB3IPQ96QF0 476 aaPredicted RBP18.7■□□□□ 0.58
SYNE3-202ENST00000553340 RIT2Q99578 217 aa18.7■□□□□ 0.58
SYNE3-202ENST00000553340 ADAM22Q9P0K1 906 aa18.7■□□□□ 0.58
SYNE3-202ENST00000553340 DDX39AO00148 427 aaKnown RBP18.7■□□□□ 0.58
SYNE3-202ENST00000553340 HGSO14964 777 aaPredicted RBP18.7■□□□□ 0.58
SYNE3-202ENST00000553340 ATP2A2P16615 1042 aaKnown RBP18.7■□□□□ 0.58
SYNE3-202ENST00000553340 VPS41P49754 854 aa18.7■□□□□ 0.58
SYNE3-202ENST00000553340 MGAT5Q09328 741 aa18.7■□□□□ 0.58
SYNE3-202ENST00000553340 KRT39Q6A163 491 aa18.7■□□□□ 0.58
SYNE3-202ENST00000553340 CCDC174Q6PII3 467 aa18.7■□□□□ 0.58
SYNE3-202ENST00000553340 HAUS6Q7Z4H7 955 aa18.7■□□□□ 0.58
SYNE3-202ENST00000553340 ECHDC2Q86YB7 292 aa18.7■□□□□ 0.58
SYNE3-202ENST00000553340 MRIQ9BWK5 157 aa18.7■□□□□ 0.58
SYNE3-202ENST00000553340 ETNK1Q9HBU6 452 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms