RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 ACAP3Q96P50 834 aa14.2□□□□□ -0.14
ACTN1-207ENST00000553290 PPP1R10Q96QC0 940 aaKnown RBP14.2□□□□□ -0.14
ACTN1-207ENST00000553290 CXCL16Q9H2A7 254 aa14.2□□□□□ -0.14
ACTN1-207ENST00000553290 ZSCAN16Q9H4T2 348 aaPredicted RBP14.2□□□□□ -0.14
ACTN1-207ENST00000553290 CACNG4Q9UBN1 327 aa14.2□□□□□ -0.14
ACTN1-207ENST00000553290 CDH22Q9UJ99 828 aa14.2□□□□□ -0.14
ACTN1-207ENST00000553290 NPHP3-ACAD11A0A0J9YXS1 232 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 SMIM28A0A1B0GU29 152 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 ABLIM1O14639 778 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 STX6O43752 255 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 KIF4AO95239 1232 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 KRT18P05783 430 aaKnown RBP14.19□□□□□ -0.14
ACTN1-207ENST00000553290 MARCKSP29966 332 aaPredicted RBP14.19□□□□□ -0.14
ACTN1-207ENST00000553290 DDIT3P35638 169 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 NCKAP1LP55160 1127 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 OSTNP61366 133 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 CACNB1Q02641 598 aaPredicted RBP14.19□□□□□ -0.14
ACTN1-207ENST00000553290 MCM6Q14566 821 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 XKR4Q5GH76 650 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 GLRA4Q5JXX5 417 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 PDXDC1Q6P996 788 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 DCLRE1AQ6PJP8 1040 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 ALKAL1Q6UXT8 129 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 TMC5Q6UXY8 1006 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 CYP26C1Q6V0L0 522 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 ZPBP2Q6X784 338 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 GPR149Q86SP6 731 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 CEP120Q8N960 986 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 CMASQ8NFW8 434 aaPredicted RBP14.19□□□□□ -0.14
ACTN1-207ENST00000553290 HASPINQ8TF76 798 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 LARP4BQ92615 738 aaKnown RBP14.19□□□□□ -0.14
ACTN1-207ENST00000553290 EDAQ92838 391 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 KCNN1Q92952 543 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 SNX21Q969T3 373 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 B3GALT6Q96L58 329 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 REEP2Q9BRK0 252 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 TTPALQ9BTX7 342 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 PLEKHA4Q9H4M7 779 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 MAN1C1Q9NR34 630 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 TSHZ2Q9NRE2 1034 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 FOXD4L1Q9NU39 408 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 SLC38A7Q9NVC3 462 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 CCDC39Q9UFE4 941 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 MTMR6Q9Y217 621 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 HCN4Q9Y3Q4 1203 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 SRPRBQ9Y5M8 271 aaKnown RBP14.19□□□□□ -0.14
ACTN1-207ENST00000553290 MORC2Q9Y6X9 1032 aaPredicted RBP14.19□□□□□ -0.14
ACTN1-207ENST00000553290 CITO14578 2027 aa14.19□□□□□ -0.14
ACTN1-207ENST00000553290 MTCL1Q9Y4B5 1905 aaKnown RBP14.18□□□□□ -0.14
ACTN1-207ENST00000553290 TMEM189-UBE2V1I3L0A0 370 aa14.18□□□□□ -0.14
ACTN1-207ENST00000553290 FAM13AO94988 1023 aa14.18□□□□□ -0.14
ACTN1-207ENST00000553290 WEE2P0C1S8 567 aa14.18□□□□□ -0.14
ACTN1-207ENST00000553290 ABCD1P33897 745 aa14.18□□□□□ -0.14
ACTN1-207ENST00000553290 ZNF131P52739 623 aa14.18□□□□□ -0.14
ACTN1-207ENST00000553290 NOLC1Q14978 699 aaKnown RBP eCLIP14.18□□□□□ -0.14
ACTN1-207ENST00000553290 RTP2Q5QGT7 225 aa14.18□□□□□ -0.14
ACTN1-207ENST00000553290 FAM171A1Q5VUB5 890 aa14.18□□□□□ -0.14
ACTN1-207ENST00000553290 KANK3Q6NY19 840 aa14.18□□□□□ -0.14
ACTN1-207ENST00000553290 HAUS6Q7Z4H7 955 aa14.18□□□□□ -0.14
ACTN1-207ENST00000553290 MYCT1Q8N699 235 aa14.18□□□□□ -0.14
ACTN1-207ENST00000553290 LRRC15Q8TF66 581 aa14.18□□□□□ -0.14
ACTN1-207ENST00000553290 PIK3R5Q8WYR1 880 aa14.18□□□□□ -0.14
ACTN1-207ENST00000553290 DDX27Q96GQ7 796 aaKnown RBP14.18□□□□□ -0.14
ACTN1-207ENST00000553290 EPSTI1Q96J88 318 aa14.18□□□□□ -0.14
ACTN1-207ENST00000553290 ZBTB45Q96K62 511 aaPredicted RBP14.18□□□□□ -0.14
ACTN1-207ENST00000553290 RHOBTB2Q9BYZ6 727 aa14.18□□□□□ -0.14
ACTN1-207ENST00000553290 PARVGQ9HBI0 331 aa14.18□□□□□ -0.14
ACTN1-207ENST00000553290 ANKFY1Q9P2R3 1169 aa14.18□□□□□ -0.14
ACTN1-207ENST00000553290 STK17AQ9UEE5 414 aa14.18□□□□□ -0.14
ACTN1-207ENST00000553290 FBXO2Q9UK22 296 aaPredicted RBP14.18□□□□□ -0.14
ACTN1-207ENST00000553290 USTQ9Y2C2 406 aa14.18□□□□□ -0.14
ACTN1-207ENST00000553290 PLXNA3P51805 1871 aa14.18□□□□□ -0.14
ACTN1-207ENST00000553290 C2CD4DB7Z1M9 353 aa14.17□□□□□ -0.14
ACTN1-207ENST00000553290 CLDN3O15551 220 aa14.17□□□□□ -0.14
ACTN1-207ENST00000553290 TRAPPC3O43617 180 aa14.17□□□□□ -0.14
ACTN1-207ENST00000553290 TBCAO75347 108 aaKnown RBP14.17□□□□□ -0.14
ACTN1-207ENST00000553290 KCNE1P15382 129 aa14.17□□□□□ -0.14
ACTN1-207ENST00000553290 SP100P23497 879 aaPredicted RBP14.17□□□□□ -0.14
ACTN1-207ENST00000553290 TXLNAP40222 546 aa14.17□□□□□ -0.14
ACTN1-207ENST00000553290 CLCNKBP51801 687 aa14.17□□□□□ -0.14
ACTN1-207ENST00000553290 ZXDAP98168 799 aa14.17□□□□□ -0.14
ACTN1-207ENST00000553290 CEBPZQ03701 1054 aaKnown RBP14.17□□□□□ -0.14
ACTN1-207ENST00000553290 MCL1Q07820 350 aa14.17□□□□□ -0.14
ACTN1-207ENST00000553290 UPP1Q16831 310 aa14.17□□□□□ -0.14
ACTN1-207ENST00000553290 SPECC1Q5M775 1068 aa14.17□□□□□ -0.14
ACTN1-207ENST00000553290 FAM173BQ6P4H8 233 aa14.17□□□□□ -0.14
ACTN1-207ENST00000553290 PRSS55Q6UWB4 352 aaPredicted RBP14.17□□□□□ -0.14
ACTN1-207ENST00000553290 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.17□□□□□ -0.14
ACTN1-207ENST00000553290 CEP57Q86XR8 500 aa14.17□□□□□ -0.14
ACTN1-207ENST00000553290 PALB2Q86YC2 1186 aa14.17□□□□□ -0.14
ACTN1-207ENST00000553290 PLCD3Q8N3E9 789 aa14.17□□□□□ -0.14
ACTN1-207ENST00000553290 BICD1Q96G01 975 aa14.17□□□□□ -0.14
ACTN1-207ENST00000553290 SNX27Q96L92 541 aa14.17□□□□□ -0.14
ACTN1-207ENST00000553290 CNTN3Q9P232 1028 aa14.17□□□□□ -0.14
ACTN1-207ENST00000553290 ARIH1Q9Y4X5 557 aaPredicted RBP14.17□□□□□ -0.14
ACTN1-207ENST00000553290 CCDC195A0A1B0GUA6 201 aa14.16□□□□□ -0.14
ACTN1-207ENST00000553290 K7ENM7 598 aa14.16□□□□□ -0.14
ACTN1-207ENST00000553290 TGM5O43548 720 aa14.16□□□□□ -0.14
ACTN1-207ENST00000553290 TRAK2O60296 914 aa14.16□□□□□ -0.14
ACTN1-207ENST00000553290 B3GAT3O94766 335 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms