RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 CASKIN2Q8WXE0 1202 aa6.99□□□□□ -1.29
LETMD1-226ENST00000550755 JADE3Q92613 823 aa6.99□□□□□ -1.29
LETMD1-226ENST00000550755 FUBP3Q96I24 572 aaKnown RBP eCLIP6.99□□□□□ -1.29
LETMD1-226ENST00000550755 MRI1Q9BV20 369 aa6.99□□□□□ -1.29
LETMD1-226ENST00000550755 SLC46A2Q9BY10 475 aa6.99□□□□□ -1.29
LETMD1-226ENST00000550755 BRINP2Q9C0B6 783 aa6.99□□□□□ -1.29
LETMD1-226ENST00000550755 REXO4Q9GZR2 422 aaKnown RBP6.99□□□□□ -1.29
LETMD1-226ENST00000550755 HOMER2Q9NSB8 354 aa6.99□□□□□ -1.29
LETMD1-226ENST00000550755 LEFTY2O00292 366 aa6.98□□□□□ -1.29
LETMD1-226ENST00000550755 RNASET2O00584 256 aaKnown RBP6.98□□□□□ -1.29
LETMD1-226ENST00000550755 GABRDO14764 452 aa6.98□□□□□ -1.29
LETMD1-226ENST00000550755 LAG3P18627 525 aa6.98□□□□□ -1.29
LETMD1-226ENST00000550755 RNASE9P60153 205 aaKnown RBP6.98□□□□□ -1.29
LETMD1-226ENST00000550755 KRT85P78386 507 aa6.98□□□□□ -1.29
LETMD1-226ENST00000550755 MXRA7P84157 204 aa6.98□□□□□ -1.29
LETMD1-226ENST00000550755 FHL2Q14192 279 aa6.98□□□□□ -1.29
LETMD1-226ENST00000550755 SEPT2Q15019 361 aa6.98□□□□□ -1.29
LETMD1-226ENST00000550755 PTPN21Q16825 1174 aa6.98□□□□□ -1.29
LETMD1-226ENST00000550755 FNDC7Q5VTL7 733 aa6.98□□□□□ -1.29
LETMD1-226ENST00000550755 EFCAB2Q5VUJ9 269 aa6.98□□□□□ -1.29
LETMD1-226ENST00000550755 NEU4Q8WWR8 484 aaPredicted RBP6.98□□□□□ -1.29
LETMD1-226ENST00000550755 DPF2Q92785 391 aa6.98□□□□□ -1.29
LETMD1-226ENST00000550755 PHACTR3Q96KR7 559 aa6.98□□□□□ -1.29
LETMD1-226ENST00000550755 SORCS2Q96PQ0 1159 aa6.98□□□□□ -1.29
LETMD1-226ENST00000550755 KRTAP4-2Q9BYR5 136 aa6.98□□□□□ -1.29
LETMD1-226ENST00000550755 FZD1Q9UP38 647 aa6.98□□□□□ -1.29
LETMD1-226ENST00000550755 NOP58Q9Y2X3 529 aaKnown RBP6.98□□□□□ -1.29
LETMD1-226ENST00000550755 SPEF1Q9Y4P9 236 aa6.98□□□□□ -1.29
LETMD1-226ENST00000550755 WASHC2CQ9Y4E1 1318 aa6.98□□□□□ -1.29
LETMD1-226ENST00000550755 POMCP01189 267 aa6.97□□□□□ -1.29
LETMD1-226ENST00000550755 HLA-DOAP06340 250 aa6.97□□□□□ -1.29
LETMD1-226ENST00000550755 GUCY1A2P33402 732 aa6.97□□□□□ -1.29
LETMD1-226ENST00000550755 WASP42768 502 aa6.97□□□□□ -1.29
LETMD1-226ENST00000550755 TIGD2Q4W5G0 525 aa6.97□□□□□ -1.29
LETMD1-226ENST00000550755 IGFL4Q6B9Z1 124 aa6.97□□□□□ -1.29
LETMD1-226ENST00000550755 PLXDC1Q8IUK5 500 aa6.97□□□□□ -1.29
LETMD1-226ENST00000550755 ANKRD13AQ8IZ07 590 aa6.97□□□□□ -1.29
LETMD1-226ENST00000550755 HDAC10Q969S8 669 aa6.97□□□□□ -1.29
LETMD1-226ENST00000550755 LENG9Q96B70 501 aa6.97□□□□□ -1.29
LETMD1-226ENST00000550755 SMAD5Q99717 465 aaKnown RBP6.97□□□□□ -1.29
LETMD1-226ENST00000550755 ATRNL1Q5VV63 1379 aa6.96□□□□□ -1.29
LETMD1-226ENST00000550755 GAGE12BA1L429 117 aa6.96□□□□□ -1.3
LETMD1-226ENST00000550755 GAGE12HA6NDE8 117 aa6.96□□□□□ -1.3
LETMD1-226ENST00000550755 ITGB1P05556 798 aa6.96□□□□□ -1.3
LETMD1-226ENST00000550755 ALDH1A3P47895 512 aa6.96□□□□□ -1.3
LETMD1-226ENST00000550755 CHN2P52757 468 aa6.96□□□□□ -1.3
LETMD1-226ENST00000550755 CREMQ03060 361 aa6.96□□□□□ -1.3
LETMD1-226ENST00000550755 KLF10Q13118 480 aa6.96□□□□□ -1.3
LETMD1-226ENST00000550755 PCBP2Q15366 365 aaKnown RBP eCLIP6.96□□□□□ -1.3
LETMD1-226ENST00000550755 LY6G5CQ5SRR4 150 aa6.96□□□□□ -1.3
LETMD1-226ENST00000550755 RSPH3Q86UC2 560 aa6.96□□□□□ -1.3
LETMD1-226ENST00000550755 TEKT5Q96M29 485 aa6.96□□□□□ -1.3
LETMD1-226ENST00000550755 PCED1AQ9H1Q7 454 aa6.96□□□□□ -1.3
LETMD1-226ENST00000550755 TDP1Q9NUW8 608 aa6.96□□□□□ -1.3
LETMD1-226ENST00000550755 GPRC5BQ9NZH0 403 aa6.96□□□□□ -1.3
LETMD1-226ENST00000550755 ATP11BQ9Y2G3 1177 aa6.96□□□□□ -1.3
LETMD1-226ENST00000550755 SIK3Q9Y2K2 1263 aa6.96□□□□□ -1.3
LETMD1-226ENST00000550755 MYBBP1AQ9BQG0 1328 aaKnown RBP6.96□□□□□ -1.3
LETMD1-226ENST00000550755 DRGXA6NNA5 263 aa6.95□□□□□ -1.3
LETMD1-226ENST00000550755 AHRRA9YTQ3 701 aa6.95□□□□□ -1.3
LETMD1-226ENST00000550755 ABHD16AO95870 558 aa6.95□□□□□ -1.3
LETMD1-226ENST00000550755 RPLP2P05387 115 aaKnown RBP6.95□□□□□ -1.3
LETMD1-226ENST00000550755 ALAS1P13196 640 aa6.95□□□□□ -1.3
LETMD1-226ENST00000550755 ZSCAN20P17040 1043 aaPredicted RBP6.95□□□□□ -1.3
LETMD1-226ENST00000550755 DDCP20711 480 aa6.95□□□□□ -1.3
LETMD1-226ENST00000550755 C5AR1P21730 350 aa6.95□□□□□ -1.3
LETMD1-226ENST00000550755 SLC6A9P48067 706 aa6.95□□□□□ -1.3
LETMD1-226ENST00000550755 HMGA2P52926 109 aa6.95□□□□□ -1.3
LETMD1-226ENST00000550755 ANAPC15P60006 121 aa6.95□□□□□ -1.3
LETMD1-226ENST00000550755 TGFB2P61812 414 aa6.95□□□□□ -1.3
LETMD1-226ENST00000550755 KIF23Q02241 960 aaPredicted RBP6.95□□□□□ -1.3
LETMD1-226ENST00000550755 PTPAQ15257 358 aa6.95□□□□□ -1.3
LETMD1-226ENST00000550755 OTUD7BQ6GQQ9 843 aa6.95□□□□□ -1.3
LETMD1-226ENST00000550755 PPP4R3AQ6IN85 833 aa6.95□□□□□ -1.3
LETMD1-226ENST00000550755 ZNF529Q6P280 563 aa6.95□□□□□ -1.3
LETMD1-226ENST00000550755 KCNV1Q6PIU1 500 aa6.95□□□□□ -1.3
LETMD1-226ENST00000550755 SYT12Q8IV01 421 aa6.95□□□□□ -1.3
LETMD1-226ENST00000550755 OR2I1PQ8NGU4 316 aa6.95□□□□□ -1.3
LETMD1-226ENST00000550755 MRIQ9BWK5 157 aa6.95□□□□□ -1.3
LETMD1-226ENST00000550755 AKIP1Q9NQ31 210 aa6.95□□□□□ -1.3
LETMD1-226ENST00000550755 RUVBL1Q9Y265 456 aaKnown RBP6.95□□□□□ -1.3
LETMD1-226ENST00000550755 USP15Q9Y4E8 981 aaPredicted RBP6.95□□□□□ -1.3
LETMD1-226ENST00000550755 ACTL7AQ9Y615 435 aa6.95□□□□□ -1.3
LETMD1-226ENST00000550755 ARID4BQ4LE39 1312 aaPredicted RBP6.95□□□□□ -1.3
LETMD1-226ENST00000550755 hCG_2014768A0A024R1R8 64 aa6.94□□□□□ -1.3
LETMD1-226ENST00000550755 PCDHGA12O60330 932 aa6.94□□□□□ -1.3
LETMD1-226ENST00000550755 CSRP2Q16527 193 aa6.94□□□□□ -1.3
LETMD1-226ENST00000550755 LRRC55Q6ZSA7 311 aa6.94□□□□□ -1.3
LETMD1-226ENST00000550755 MED25Q71SY5 747 aa6.94□□□□□ -1.3
LETMD1-226ENST00000550755 AMER2Q8N7J2 671 aa6.94□□□□□ -1.3
LETMD1-226ENST00000550755 PROKR1Q8TCW9 393 aa6.94□□□□□ -1.3
LETMD1-226ENST00000550755 SLC13A1Q9BZW2 595 aa6.94□□□□□ -1.3
LETMD1-226ENST00000550755 ZNF768Q9H5H4 540 aaKnown RBP6.94□□□□□ -1.3
LETMD1-226ENST00000550755 TUBD1Q9UJT1 453 aa6.94□□□□□ -1.3
LETMD1-226ENST00000550755 CHST2Q9Y4C5 530 aa6.94□□□□□ -1.3
LETMD1-226ENST00000550755 PCDHGA9Q9Y5G4 932 aaKnown RBP6.94□□□□□ -1.3
LETMD1-226ENST00000550755 PCDHGA8Q9Y5G5 932 aa6.94□□□□□ -1.3
LETMD1-226ENST00000550755 PCDHGA7Q9Y5G6 932 aa6.94□□□□□ -1.3
LETMD1-226ENST00000550755 PCDHGA6Q9Y5G7 932 aa6.94□□□□□ -1.3
LETMD1-226ENST00000550755 PCDHGA3Q9Y5H0 932 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms