RNA–Protein interactions for RNA: ENST00000548868.5

SCRN3-212, Transcript of secernin 3, humanhuman

TSL 2

Gene SCRN3, Length 1,594 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-212ENST00000548868 TSPYL2Q9H2G4 693 aaPredicted RBP12.22□□□□□ -0.45
SCRN3-212ENST00000548868 PLEKHA5Q9HAU0 1116 aa12.22□□□□□ -0.45
SCRN3-212ENST00000548868 IPPQ9Y573 584 aa12.22□□□□□ -0.45
SCRN3-212ENST00000548868 PCDHB2Q9Y5E7 798 aa12.22□□□□□ -0.45
SCRN3-212ENST00000548868 TTC3P53804 2025 aa12.22□□□□□ -0.45
SCRN3-212ENST00000548868 EVI5O60447 810 aa12.22□□□□□ -0.45
SCRN3-212ENST00000548868 STX10O60499 249 aa12.22□□□□□ -0.45
SCRN3-212ENST00000548868 YARSP54577 528 aaKnown RBP12.22□□□□□ -0.45
SCRN3-212ENST00000548868 SEZ6Q53EL9 994 aa12.22□□□□□ -0.45
SCRN3-212ENST00000548868 SLC24A5Q71RS6 500 aa12.22□□□□□ -0.45
SCRN3-212ENST00000548868 APTXQ7Z2E3 356 aaKnown RBP12.22□□□□□ -0.45
SCRN3-212ENST00000548868 MRPL10Q7Z7H8 261 aaKnown RBP12.22□□□□□ -0.45
SCRN3-212ENST00000548868 C7orf61Q8IZ16 206 aa12.22□□□□□ -0.45
SCRN3-212ENST00000548868 CEP120Q8N960 986 aa12.22□□□□□ -0.45
SCRN3-212ENST00000548868 SMG8Q8ND04 991 aaKnown RBP12.22□□□□□ -0.45
SCRN3-212ENST00000548868 PARD3BQ8TEW8 1205 aa12.22□□□□□ -0.45
SCRN3-212ENST00000548868 PGBD4Q96DM1 585 aa12.22□□□□□ -0.45
SCRN3-212ENST00000548868 TSPAN18Q96SJ8 248 aa12.22□□□□□ -0.45
SCRN3-212ENST00000548868 ASB7Q9H672 318 aa12.22□□□□□ -0.45
SCRN3-212ENST00000548868 TOPORSQ9NS56 1045 aaPredicted RBP12.22□□□□□ -0.45
SCRN3-212ENST00000548868 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.22□□□□□ -0.45
SCRN3-212ENST00000548868 C9IYK1 514 aa12.21□□□□□ -0.46
SCRN3-212ENST00000548868 CBFA2T2O43439 604 aa12.21□□□□□ -0.46
SCRN3-212ENST00000548868 EOMESO95936 686 aa12.21□□□□□ -0.46
SCRN3-212ENST00000548868 ITGA4P13612 1032 aa12.21□□□□□ -0.46
SCRN3-212ENST00000548868 ITGB8P26012 769 aa12.21□□□□□ -0.46
SCRN3-212ENST00000548868 GTF2H1P32780 548 aa12.21□□□□□ -0.46
SCRN3-212ENST00000548868 COPB1P53618 953 aaKnown RBP12.21□□□□□ -0.46
SCRN3-212ENST00000548868 OSTNP61366 133 aa12.21□□□□□ -0.46
SCRN3-212ENST00000548868 CLDN10P78369 228 aa12.21□□□□□ -0.46
SCRN3-212ENST00000548868 FAM189BP81408 668 aa12.21□□□□□ -0.46
SCRN3-212ENST00000548868 PPIGQ13427 754 aaKnown RBP eCLIP12.21□□□□□ -0.46
SCRN3-212ENST00000548868 ENOX2Q16206 610 aaKnown RBP12.21□□□□□ -0.46
SCRN3-212ENST00000548868 VWA3BQ502W6 1294 aa12.21□□□□□ -0.46
SCRN3-212ENST00000548868 DEFB128Q7Z7B8 93 aa12.21□□□□□ -0.46
SCRN3-212ENST00000548868 RTN4RL1Q86UN2 441 aaPredicted RBP12.21□□□□□ -0.46
SCRN3-212ENST00000548868 SLC35C1Q96A29 364 aa12.21□□□□□ -0.46
SCRN3-212ENST00000548868 FNBP1Q96RU3 617 aa12.21□□□□□ -0.46
SCRN3-212ENST00000548868 NXF3Q9H4D5 531 aaKnown RBP12.21□□□□□ -0.46
SCRN3-212ENST00000548868 UBN1Q9NPG3 1134 aa12.21□□□□□ -0.46
SCRN3-212ENST00000548868 SNTG2Q9NY99 539 aa12.21□□□□□ -0.46
SCRN3-212ENST00000548868 TAB2Q9NYJ8 693 aa12.21□□□□□ -0.46
SCRN3-212ENST00000548868 A0A1B0GTH6 734 aa12.2□□□□□ -0.46
SCRN3-212ENST00000548868 TTC26A0AVF1 554 aa12.2□□□□□ -0.46
SCRN3-212ENST00000548868 ENPP3O14638 875 aa12.2□□□□□ -0.46
SCRN3-212ENST00000548868 EFCAB14O75071 495 aa12.2□□□□□ -0.46
SCRN3-212ENST00000548868 N4BP1O75113 896 aaKnown RBP12.2□□□□□ -0.46
SCRN3-212ENST00000548868 RECQL4O94761 1208 aa12.2□□□□□ -0.46
SCRN3-212ENST00000548868 AFPP02771 609 aaKnown RBP12.2□□□□□ -0.46
SCRN3-212ENST00000548868 CXCL8P10145 99 aa12.2□□□□□ -0.46
SCRN3-212ENST00000548868 CSF2RAP15509 400 aa12.2□□□□□ -0.46
SCRN3-212ENST00000548868 AP3M2P53677 418 aa12.2□□□□□ -0.46
SCRN3-212ENST00000548868 UBASH3AP57075 661 aa12.2□□□□□ -0.46
SCRN3-212ENST00000548868 PLCB2Q00722 1185 aa12.2□□□□□ -0.46
SCRN3-212ENST00000548868 IKBKEQ14164 716 aa12.2□□□□□ -0.46
SCRN3-212ENST00000548868 SLC10A6Q3KNW5 377 aa12.2□□□□□ -0.46
SCRN3-212ENST00000548868 DCAF17Q5H9S7 520 aaPredicted RBP12.2□□□□□ -0.46
SCRN3-212ENST00000548868 MIIPQ5JXC2 388 aa12.2□□□□□ -0.46
SCRN3-212ENST00000548868 TCERG1LQ5VWI1 586 aa12.2□□□□□ -0.46
SCRN3-212ENST00000548868 ECHDC2Q86YB7 292 aa12.2□□□□□ -0.46
SCRN3-212ENST00000548868 NT5DC4Q86YG4 428 aa12.2□□□□□ -0.46
SCRN3-212ENST00000548868 TMEM192Q8IY95 271 aa12.2□□□□□ -0.46
SCRN3-212ENST00000548868 LINC01599Q8WXQ3 324 aa12.2□□□□□ -0.46
SCRN3-212ENST00000548868 SNX27Q96L92 541 aa12.2□□□□□ -0.46
SCRN3-212ENST00000548868 CGRRF1Q99675 332 aa12.2□□□□□ -0.46
SCRN3-212ENST00000548868 VPS16Q9H269 839 aa12.2□□□□□ -0.46
SCRN3-212ENST00000548868 NDST4Q9H3R1 872 aa12.2□□□□□ -0.46
SCRN3-212ENST00000548868 ELAC1Q9H777 363 aaKnown RBP12.2□□□□□ -0.46
SCRN3-212ENST00000548868 IL23AQ9NPF7 189 aa12.2□□□□□ -0.46
SCRN3-212ENST00000548868 GIT1Q9Y2X7 761 aa12.2□□□□□ -0.46
SCRN3-212ENST00000548868 DERAQ9Y315 318 aa12.2□□□□□ -0.46
SCRN3-212ENST00000548868 HES2Q9Y543 173 aa12.2□□□□□ -0.46
SCRN3-212ENST00000548868 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.2□□□□□ -0.46
SCRN3-212ENST00000548868 ABHD14A-ACY1A0A1B0GW23 586 aa12.19□□□□□ -0.46
SCRN3-212ENST00000548868 LRRIQ3A6PVS8 624 aaPredicted RBP12.19□□□□□ -0.46
SCRN3-212ENST00000548868 LGALS16A8MUM7 142 aa12.19□□□□□ -0.46
SCRN3-212ENST00000548868 PMM2O15305 246 aa12.19□□□□□ -0.46
SCRN3-212ENST00000548868 ACTN1P12814 892 aa12.19□□□□□ -0.46
SCRN3-212ENST00000548868 FPGSQ05932 587 aa12.19□□□□□ -0.46
SCRN3-212ENST00000548868 KCNH2Q12809 1159 aa12.19□□□□□ -0.46
SCRN3-212ENST00000548868 XKR4Q5GH76 650 aa12.19□□□□□ -0.46
SCRN3-212ENST00000548868 ALKAL1Q6UXT8 129 aa12.19□□□□□ -0.46
SCRN3-212ENST00000548868 ZNF598Q86UK7 904 aaKnown RBP12.19□□□□□ -0.46
SCRN3-212ENST00000548868 WDR49Q8IV35 697 aa12.19□□□□□ -0.46
SCRN3-212ENST00000548868 PLEKHO2Q8TD55 490 aa12.19□□□□□ -0.46
SCRN3-212ENST00000548868 DPF3Q92784 378 aa12.19□□□□□ -0.46
SCRN3-212ENST00000548868 CCDC127Q96BQ5 260 aa12.19□□□□□ -0.46
SCRN3-212ENST00000548868 VWCEQ96DN2 955 aa12.19□□□□□ -0.46
SCRN3-212ENST00000548868 FAM212AQ96EL1 285 aa12.19□□□□□ -0.46
SCRN3-212ENST00000548868 APOL6Q9BWW8 343 aa12.19□□□□□ -0.46
SCRN3-212ENST00000548868 TRIM5Q9C035 493 aa12.19□□□□□ -0.46
SCRN3-212ENST00000548868 PDE11AQ9HCR9 933 aa12.19□□□□□ -0.46
SCRN3-212ENST00000548868 TMEM161AQ9NX61 479 aa12.19□□□□□ -0.46
SCRN3-212ENST00000548868 IFNKQ9P0W0 207 aa12.19□□□□□ -0.46
SCRN3-212ENST00000548868 CNTN3Q9P232 1028 aa12.19□□□□□ -0.46
SCRN3-212ENST00000548868 PARP2Q9UGN5 583 aa12.19□□□□□ -0.46
SCRN3-212ENST00000548868 LACTBL1A8MY62 500 aa12.18□□□□□ -0.46
SCRN3-212ENST00000548868 PES1O00541 588 aaKnown RBP12.18□□□□□ -0.46
SCRN3-212ENST00000548868 P4HA2O15460 535 aa12.18□□□□□ -0.46
SCRN3-212ENST00000548868 BAIAP3O94812 1187 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms