RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 TMEM165Q9HC07 324 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 GINM1Q9NU53 330 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 GCNT4Q9P109 453 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 TNRC6CQ9HCJ0 1690 aaKnown RBP9.14□□□□□ -0.95
CLIP1-218ENST00000545889 CCDC189A1A4V9 331 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 RRN3P2A6NIE6 340 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 KRIT1O00522 736 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 CLTAP09496 248 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 MYBL2P10244 700 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 CA4P22748 312 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 MGAT5BQ3V5L5 792 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 SPATA1Q5VX52 437 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 KCTD16Q68DU8 428 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 CDC26Q8NHZ8 85 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 SEPT5Q99719 369 aaPredicted RBP9.14□□□□□ -0.95
CLIP1-218ENST00000545889 CHCHD3Q9NX63 227 aaKnown RBP9.14□□□□□ -0.95
CLIP1-218ENST00000545889 ERAP1Q9NZ08 941 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 DPP7Q9UHL4 492 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 ROBO3Q96MS0 1386 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 TPD52L2O43399 206 aaKnown RBP9.14□□□□□ -0.95
CLIP1-218ENST00000545889 C4AP0C0L4 1744 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 DSG3P32926 999 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 LMNB2Q03252 620 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 LLGL1Q15334 1064 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 ANKRD20A3Q5VUR7 823 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 ZNF579Q8NAF0 562 aaKnown RBP9.14□□□□□ -0.95
CLIP1-218ENST00000545889 ITFG2Q969R8 447 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 VPS39Q96JC1 886 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 RMI1Q9H9A7 625 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 MAP3K13O43283 966 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 KRT1P04264 644 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 CDC25BP30305 580 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 CCDC15Q0P6D6 951 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 PDCD2Q16342 344 aaPredicted RBP9.14□□□□□ -0.95
CLIP1-218ENST00000545889 KYAT1Q16773 422 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 PHLDB2Q86SQ0 1253 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 CCDC51Q96ER9 411 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 TSC22D3Q99576 134 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 LXNQ9BS40 222 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 TRIM62Q9BVG3 475 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 ITM2BQ9Y287 266 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 CHD4Q14839 1912 aa9.14□□□□□ -0.95
CLIP1-218ENST00000545889 PDHXO00330 501 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 SART1O43290 800 aaKnown RBP9.13□□□□□ -0.95
CLIP1-218ENST00000545889 BUB1O43683 1085 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 ARP10275 920 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 ADORA2BP29275 332 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 NR1H3Q13133 447 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 DARS2Q6PI48 645 aaKnown RBP9.13□□□□□ -0.95
CLIP1-218ENST00000545889 TRIM58Q8NG06 486 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 KAT2BQ92831 832 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 EIF2AK1Q9BQI3 630 aaKnown RBP9.13□□□□□ -0.95
CLIP1-218ENST00000545889 FAM167BQ9BTA0 163 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 SCN7AQ01118 1682 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 WNT7AO00755 349 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 HOXA2O43364 376 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 PRKCBP05771 671 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 SSTR3P32745 418 aaPredicted RBP9.13□□□□□ -0.95
CLIP1-218ENST00000545889 POLE2P56282 527 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 MAN2A1Q16706 1144 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 TREML2Q5T2D2 321 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 JADE1Q6IE81 842 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 ZC3H15Q8WU90 426 aaKnown RBP9.13□□□□□ -0.95
CLIP1-218ENST00000545889 FAM210AQ96ND0 272 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 KCNH7Q9NS40 1196 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 FBXL21Q9UKT6 434 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 RSPH10B2B2RC85 870 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 CIB2O75838 187 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 MYL1P05976 194 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 RSPH10BP0C881 870 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 ATF2P15336 505 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 PCK1P35558 622 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 ADKP55263 362 aaKnown RBP9.13□□□□□ -0.95
CLIP1-218ENST00000545889 CNTN2Q02246 1040 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 PPATQ06203 517 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 MXD4Q14582 209 aaPredicted RBP9.13□□□□□ -0.95
CLIP1-218ENST00000545889 WHAMMP3Q1A5X7 153 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 PAN2Q504Q3 1202 aaKnown RBP9.13□□□□□ -0.95
CLIP1-218ENST00000545889 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.13□□□□□ -0.95
CLIP1-218ENST00000545889 METTL16Q86W50 562 aaKnown RBP9.13□□□□□ -0.95
CLIP1-218ENST00000545889 SYTL5Q8TDW5 730 aaPredicted RBP9.13□□□□□ -0.95
CLIP1-218ENST00000545889 IFT43Q96FT9 208 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 SPATC1LQ9H0A9 340 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 TLK1Q9UKI8 766 aa9.13□□□□□ -0.95
CLIP1-218ENST00000545889 CCDC160A6NGH7 325 aa9.12□□□□□ -0.95
CLIP1-218ENST00000545889 CXCL11O14625 94 aa9.12□□□□□ -0.95
CLIP1-218ENST00000545889 HGSO14964 777 aaPredicted RBP9.12□□□□□ -0.95
CLIP1-218ENST00000545889 PPP1R11O60927 126 aaPredicted RBP9.12□□□□□ -0.95
CLIP1-218ENST00000545889 GFPT2O94808 682 aa9.12□□□□□ -0.95
CLIP1-218ENST00000545889 ZBED1O96006 694 aa9.12□□□□□ -0.95
CLIP1-218ENST00000545889 FBXW4P57775 412 aa9.12□□□□□ -0.95
CLIP1-218ENST00000545889 INHBEP58166 350 aa9.12□□□□□ -0.95
CLIP1-218ENST00000545889 ADCY2Q08462 1091 aa9.12□□□□□ -0.95
CLIP1-218ENST00000545889 KCNB1Q14721 858 aa9.12□□□□□ -0.95
CLIP1-218ENST00000545889 DUOXA2Q1HG44 320 aa9.12□□□□□ -0.95
CLIP1-218ENST00000545889 NAA35Q5VZE5 725 aa9.12□□□□□ -0.95
CLIP1-218ENST00000545889 TRIM74Q86UV6 250 aa9.12□□□□□ -0.95
CLIP1-218ENST00000545889 TRIM73Q86UV7 250 aa9.12□□□□□ -0.95
CLIP1-218ENST00000545889 DCP1BQ8IZD4 617 aaKnown RBP9.12□□□□□ -0.95
CLIP1-218ENST00000545889 DAGLBQ8NCG7 672 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms