RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 CLDN3O15551 220 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 THAP12O43422 761 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 KRT16P08779 473 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 VIL1P09327 827 aaKnown RBP9.34□□□□□ -0.91
TDP1-204ENST00000545686 ATF2P15336 505 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 STX2P32856 288 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 SLC1A1P43005 524 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 MSH2P43246 934 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 STAT2P52630 851 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 ATP11AP98196 1134 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 PTP4A2Q12974 167 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 NR1H3Q13133 447 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 STAT4Q14765 748 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 NAA25Q14CX7 972 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 ACAD10Q6JQN1 1059 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 PADI6Q6TGC4 694 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.34□□□□□ -0.91
TDP1-204ENST00000545686 OTUD6AQ7L8S5 288 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 RDH13Q8NBN7 331 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 MGARPQ8TDB4 240 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 FBF1Q8TES7 1133 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 KREMEN1Q96MU8 473 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 CCDC77Q9BR77 488 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 TRIM6Q9C030 488 aaPredicted RBP9.34□□□□□ -0.91
TDP1-204ENST00000545686 TMEM117Q9H0C3 514 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 TXLNGQ9NUQ3 528 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 NINJ2Q9NZG7 142 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 FAM198AQ9UFP1 575 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 COQ4Q9Y3A0 265 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 PSME4Q14997 1843 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 FAM196BA6NMK8 535 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 CYP26A1O43174 497 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 UNC5CO95185 931 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 RPSAP08865 295 aaKnown RBP9.34□□□□□ -0.91
TDP1-204ENST00000545686 PLS3P13797 630 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 CYP11B1P15538 503 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 CHKAP35790 457 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 GPC3P51654 580 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 ITGA8P53708 1063 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 SLC18A1P54219 525 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 GTF2BQ00403 316 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 ENPEPQ07075 957 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 PARP6Q2NL67 630 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 SH3BP5LQ7L8J4 393 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 SLC47A2Q86VL8 602 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 ANKRD35Q8N283 1001 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 FITM2Q8N6M3 262 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 TRIM11Q96F44 468 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 DCLK3Q9C098 648 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 KCNK9Q9NPC2 374 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 UBN1Q9NPG3 1134 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 EURLQ9NYK6 297 aa9.34□□□□□ -0.91
TDP1-204ENST00000545686 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.34□□□□□ -0.91
TDP1-204ENST00000545686 MYH9P35579 1960 aaKnown RBP9.34□□□□□ -0.92
TDP1-204ENST00000545686 LUC7L3O95232 432 aaKnown RBP9.33□□□□□ -0.92
TDP1-204ENST00000545686 CFBP00751 764 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 SLURP2P0DP57 97 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 MYBL1P10243 752 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 IBSPP21815 317 aaPredicted RBP9.33□□□□□ -0.92
TDP1-204ENST00000545686 IL9RQ01113 521 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 MKRN4PQ13434 485 aaPredicted RBP9.33□□□□□ -0.92
TDP1-204ENST00000545686 SPDYAQ5MJ70 313 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 RGS9BPQ6ZS82 235 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 PPM1KQ8N3J5 372 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 LARGE2Q8N3Y3 721 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 ANKRD42Q8N9B4 389 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 ATL2Q8NHH9 583 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 C1orf54Q8WWF1 131 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 KAT5Q92993 513 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 FAM212AQ96EL1 285 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 FAXDC2Q96IV6 333 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 BTBD6Q96KE9 485 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 CBWD1Q9BRT8 395 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 PCIF1Q9H4Z3 704 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 ANAPC5Q9UJX4 755 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 L3MBTL1Q9Y468 752 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 IPO5O00410 1097 aaKnown RBP9.33□□□□□ -0.92
TDP1-204ENST00000545686 MAGEB2O15479 319 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 CREB1P16220 341 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 ATP2A2P16615 1042 aaKnown RBP9.33□□□□□ -0.92
TDP1-204ENST00000545686 TAL1P17542 331 aaPredicted RBP9.33□□□□□ -0.92
TDP1-204ENST00000545686 GTF2H1P32780 548 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 TCP10Q12799 353 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 CLEC16AQ2KHT3 1053 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 RBM26Q5T8P6 1007 aaKnown RBP9.33□□□□□ -0.92
TDP1-204ENST00000545686 KRT39Q6A163 491 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 CGB2Q6NT52 195 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 ENOSF1Q7L5Y1 443 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 CCDC89Q8N998 374 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 PLEKHO2Q8TD55 490 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 DDX1Q92499 740 aaKnown RBP9.33□□□□□ -0.92
TDP1-204ENST00000545686 RMDN2Q96LZ7 410 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 NT5C1BQ96P26 610 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 POP1Q99575 1024 aaKnown RBP9.33□□□□□ -0.92
TDP1-204ENST00000545686 RANBP17Q9H2T7 1088 aaKnown RBP9.33□□□□□ -0.92
TDP1-204ENST00000545686 TMEM8AQ9HCN3 771 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 SLC5A4Q9NY91 659 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 CTNNAL1Q9UBT7 734 aa9.33□□□□□ -0.92
TDP1-204ENST00000545686 MRPL11Q9Y3B7 192 aaKnown RBP9.33□□□□□ -0.92
TDP1-204ENST00000545686 STARD13Q9Y3M8 1113 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms