RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 SLC38A7Q9NVC3 462 aa19.13■□□□□ 0.65
LTBR-210ENST00000542830 CACNG4Q9UBN1 327 aa19.13■□□□□ 0.65
LTBR-210ENST00000542830 CCDC39Q9UFE4 941 aa19.13■□□□□ 0.65
LTBR-210ENST00000542830 MTMR6Q9Y217 621 aa19.13■□□□□ 0.65
LTBR-210ENST00000542830 SRPRBQ9Y5M8 271 aaKnown RBP19.13■□□□□ 0.65
LTBR-210ENST00000542830 MORC2Q9Y6X9 1032 aaPredicted RBP19.13■□□□□ 0.65
LTBR-210ENST00000542830 NPHP3-ACAD11A0A0J9YXS1 232 aa19.12■□□□□ 0.65
LTBR-210ENST00000542830 TMEM189-UBE2V1I3L0A0 370 aa19.12■□□□□ 0.65
LTBR-210ENST00000542830 FAM13AO94988 1023 aa19.12■□□□□ 0.65
LTBR-210ENST00000542830 KIF4AO95239 1232 aa19.12■□□□□ 0.65
LTBR-210ENST00000542830 KRT18P05783 430 aaKnown RBP19.12■□□□□ 0.65
LTBR-210ENST00000542830 TXLNAP40222 546 aa19.12■□□□□ 0.65
LTBR-210ENST00000542830 NCKAP1LP55160 1127 aa19.12■□□□□ 0.65
LTBR-210ENST00000542830 CACNB1Q02641 598 aaPredicted RBP19.12■□□□□ 0.65
LTBR-210ENST00000542830 DHX8Q14562 1220 aaKnown RBP19.12■□□□□ 0.65
LTBR-210ENST00000542830 MCM6Q14566 821 aa19.12■□□□□ 0.65
LTBR-210ENST00000542830 XKR4Q5GH76 650 aa19.12■□□□□ 0.65
LTBR-210ENST00000542830 ZBTB33Q86T24 672 aa19.12■□□□□ 0.65
LTBR-210ENST00000542830 CEP120Q8N960 986 aa19.12■□□□□ 0.65
LTBR-210ENST00000542830 HDAC7Q8WUI4 952 aa19.12■□□□□ 0.65
LTBR-210ENST00000542830 RIN2Q8WYP3 895 aaPredicted RBP19.12■□□□□ 0.65
LTBR-210ENST00000542830 LARP4BQ92615 738 aaKnown RBP19.12■□□□□ 0.65
LTBR-210ENST00000542830 REEP2Q9BRK0 252 aa19.12■□□□□ 0.65
LTBR-210ENST00000542830 TTPALQ9BTX7 342 aa19.12■□□□□ 0.65
LTBR-210ENST00000542830 PARVGQ9HBI0 331 aa19.12■□□□□ 0.65
LTBR-210ENST00000542830 FOXD4L1Q9NU39 408 aa19.12■□□□□ 0.65
LTBR-210ENST00000542830 ABLIM1O14639 778 aa19.11■□□□□ 0.65
LTBR-210ENST00000542830 MARCKSP29966 332 aaPredicted RBP19.11■□□□□ 0.65
LTBR-210ENST00000542830 ABCD1P33897 745 aa19.11■□□□□ 0.65
LTBR-210ENST00000542830 DDIT3P35638 169 aa19.11■□□□□ 0.65
LTBR-210ENST00000542830 ZNF131P52739 623 aa19.11■□□□□ 0.65
LTBR-210ENST00000542830 NOLC1Q14978 699 aaKnown RBP eCLIP19.11■□□□□ 0.65
LTBR-210ENST00000542830 GLRA4Q5JXX5 417 aa19.11■□□□□ 0.65
LTBR-210ENST00000542830 PDXDC1Q6P996 788 aa19.11■□□□□ 0.65
LTBR-210ENST00000542830 ALKAL1Q6UXT8 129 aa19.11■□□□□ 0.65
LTBR-210ENST00000542830 TMC5Q6UXY8 1006 aa19.11■□□□□ 0.65
LTBR-210ENST00000542830 CYP26C1Q6V0L0 522 aa19.11■□□□□ 0.65
LTBR-210ENST00000542830 C15orf39Q6ZRI6 1047 aa19.11■□□□□ 0.65
LTBR-210ENST00000542830 GPR149Q86SP6 731 aa19.11■□□□□ 0.65
LTBR-210ENST00000542830 HSCBQ8IWL3 235 aa19.11■□□□□ 0.65
LTBR-210ENST00000542830 MYCT1Q8N699 235 aa19.11■□□□□ 0.65
LTBR-210ENST00000542830 CMASQ8NFW8 434 aaPredicted RBP19.11■□□□□ 0.65
LTBR-210ENST00000542830 HASPINQ8TF76 798 aa19.11■□□□□ 0.65
LTBR-210ENST00000542830 CXCL16Q9H2A7 254 aa19.11■□□□□ 0.65
LTBR-210ENST00000542830 MAN1C1Q9NR34 630 aa19.11■□□□□ 0.65
LTBR-210ENST00000542830 TSHZ2Q9NRE2 1034 aa19.11■□□□□ 0.65
LTBR-210ENST00000542830 ANKFY1Q9P2R3 1169 aa19.11■□□□□ 0.65
LTBR-210ENST00000542830 STK17AQ9UEE5 414 aa19.11■□□□□ 0.65
LTBR-210ENST00000542830 CDH22Q9UJ99 828 aa19.11■□□□□ 0.65
LTBR-210ENST00000542830 FBXO2Q9UK22 296 aaPredicted RBP19.11■□□□□ 0.65
LTBR-210ENST00000542830 SMIM28A0A1B0GU29 152 aa19.1■□□□□ 0.65
LTBR-210ENST00000542830 CLDN3O15551 220 aa19.1■□□□□ 0.65
LTBR-210ENST00000542830 TBCAO75347 108 aaKnown RBP19.1■□□□□ 0.65
LTBR-210ENST00000542830 PDIA4P13667 645 aaKnown RBP19.1■□□□□ 0.65
LTBR-210ENST00000542830 OSTNP61366 133 aa19.1■□□□□ 0.65
LTBR-210ENST00000542830 FAM171A1Q5VUB5 890 aa19.1■□□□□ 0.65
LTBR-210ENST00000542830 FAM173BQ6P4H8 233 aa19.1■□□□□ 0.65
LTBR-210ENST00000542830 DCLRE1AQ6PJP8 1040 aa19.1■□□□□ 0.65
LTBR-210ENST00000542830 HAUS6Q7Z4H7 955 aa19.1■□□□□ 0.65
LTBR-210ENST00000542830 LRRC15Q8TF66 581 aa19.1■□□□□ 0.65
LTBR-210ENST00000542830 PIK3R5Q8WYR1 880 aa19.1■□□□□ 0.65
LTBR-210ENST00000542830 EDAQ92838 391 aa19.1■□□□□ 0.65
LTBR-210ENST00000542830 BICD1Q96G01 975 aa19.1■□□□□ 0.65
LTBR-210ENST00000542830 DDX27Q96GQ7 796 aaKnown RBP19.1■□□□□ 0.65
LTBR-210ENST00000542830 EPSTI1Q96J88 318 aa19.1■□□□□ 0.65
LTBR-210ENST00000542830 B3GALT6Q96L58 329 aa19.1■□□□□ 0.65
LTBR-210ENST00000542830 SNX27Q96L92 541 aa19.1■□□□□ 0.65
LTBR-210ENST00000542830 RHOBTB2Q9BYZ6 727 aa19.1■□□□□ 0.65
LTBR-210ENST00000542830 PLEKHA4Q9H4M7 779 aa19.1■□□□□ 0.65
LTBR-210ENST00000542830 USTQ9Y2C2 406 aa19.1■□□□□ 0.65
LTBR-210ENST00000542830 HCN4Q9Y3Q4 1203 aa19.1■□□□□ 0.65
LTBR-210ENST00000542830 TRAPPC3O43617 180 aa19.09■□□□□ 0.65
LTBR-210ENST00000542830 B3GAT3O94766 335 aa19.09■□□□□ 0.65
LTBR-210ENST00000542830 WEE2P0C1S8 567 aa19.09■□□□□ 0.65
LTBR-210ENST00000542830 HARSP12081 509 aaKnown RBP19.09■□□□□ 0.65
LTBR-210ENST00000542830 KCNE1P15382 129 aa19.09■□□□□ 0.65
LTBR-210ENST00000542830 CEBPZQ03701 1054 aaKnown RBP19.09■□□□□ 0.65
LTBR-210ENST00000542830 MCL1Q07820 350 aa19.09■□□□□ 0.65
LTBR-210ENST00000542830 UPP1Q16831 310 aa19.09■□□□□ 0.65
LTBR-210ENST00000542830 RTP2Q5QGT7 225 aa19.09■□□□□ 0.65
LTBR-210ENST00000542830 KANK3Q6NY19 840 aa19.09■□□□□ 0.65
LTBR-210ENST00000542830 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.09■□□□□ 0.65
LTBR-210ENST00000542830 KRI1Q8N9T8 703 aaKnown RBP19.09■□□□□ 0.65
LTBR-210ENST00000542830 ZBTB45Q96K62 511 aaPredicted RBP19.09■□□□□ 0.65
LTBR-210ENST00000542830 CNTN3Q9P232 1028 aa19.09■□□□□ 0.65
LTBR-210ENST00000542830 K7ENM7 598 aa19.08■□□□□ 0.64
LTBR-210ENST00000542830 TRAK2O60296 914 aa19.08■□□□□ 0.64
LTBR-210ENST00000542830 SP100P23497 879 aaPredicted RBP19.08■□□□□ 0.64
LTBR-210ENST00000542830 MATR3P43243 847 aaKnown RBP eCLIP19.08■□□□□ 0.64
LTBR-210ENST00000542830 CLCNKBP51801 687 aa19.08■□□□□ 0.64
LTBR-210ENST00000542830 ZXDAP98168 799 aa19.08■□□□□ 0.64
LTBR-210ENST00000542830 SLC39A14Q15043 492 aa19.08■□□□□ 0.64
LTBR-210ENST00000542830 KYAT1Q16773 422 aa19.08■□□□□ 0.64
LTBR-210ENST00000542830 SPECC1Q5M775 1068 aa19.08■□□□□ 0.64
LTBR-210ENST00000542830 RRAGBQ5VZM2 374 aa19.08■□□□□ 0.64
LTBR-210ENST00000542830 CCDC149Q6ZUS6 474 aa19.08■□□□□ 0.64
LTBR-210ENST00000542830 CEP57Q86XR8 500 aa19.08■□□□□ 0.64
LTBR-210ENST00000542830 PLCD3Q8N3E9 789 aa19.08■□□□□ 0.64
LTBR-210ENST00000542830 TDRD5Q8NAT2 981 aaKnown RBP19.08■□□□□ 0.64
LTBR-210ENST00000542830 USP28Q96RU2 1077 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms