RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 MATR3P43243 847 aaKnown RBP eCLIP13.01□□□□□ -0.33
KNTC1-208ENST00000535410 OTOP3Q7RTS5 596 aa13.01□□□□□ -0.33
KNTC1-208ENST00000535410 GPR149Q86SP6 731 aa13.01□□□□□ -0.33
KNTC1-208ENST00000535410 KRI1Q8N9T8 703 aaKnown RBP13.01□□□□□ -0.33
KNTC1-208ENST00000535410 RIN2Q8WYP3 895 aaPredicted RBP13.01□□□□□ -0.33
KNTC1-208ENST00000535410 STAMQ92783 540 aa13.01□□□□□ -0.33
KNTC1-208ENST00000535410 BICD1Q96G01 975 aa13.01□□□□□ -0.33
KNTC1-208ENST00000535410 TARS2Q9BW92 718 aaKnown RBP13.01□□□□□ -0.33
KNTC1-208ENST00000535410 GPR62Q9BZJ7 368 aa13.01□□□□□ -0.33
KNTC1-208ENST00000535410 PARVGQ9HBI0 331 aa13.01□□□□□ -0.33
KNTC1-208ENST00000535410 PTPRHQ9HD43 1115 aa13.01□□□□□ -0.33
KNTC1-208ENST00000535410 SMIM28A0A1B0GU29 152 aa13□□□□□ -0.33
KNTC1-208ENST00000535410 FAM86C2PA6NEL3 165 aa13□□□□□ -0.33
KNTC1-208ENST00000535410 CASTOR2A6NHX0 329 aa13□□□□□ -0.33
KNTC1-208ENST00000535410 TMEM189-UBE2V1I3L0A0 370 aa13□□□□□ -0.33
KNTC1-208ENST00000535410 TBCAO75347 108 aaKnown RBP13□□□□□ -0.33
KNTC1-208ENST00000535410 B3GAT3O94766 335 aa13□□□□□ -0.33
KNTC1-208ENST00000535410 HSP90AA1P07900 732 aaKnown RBP13□□□□□ -0.33
KNTC1-208ENST00000535410 MAPTP10636 758 aaKnown RBP13□□□□□ -0.33
KNTC1-208ENST00000535410 RPL9P32969 192 aaKnown RBP13□□□□□ -0.33
KNTC1-208ENST00000535410 RAD51AP2Q09MP3 1159 aa13□□□□□ -0.33
KNTC1-208ENST00000535410 FAM171A1Q5VUB5 890 aa13□□□□□ -0.33
KNTC1-208ENST00000535410 TMC5Q6UXY8 1006 aa13□□□□□ -0.33
KNTC1-208ENST00000535410 PDZRN4Q6ZMN7 1036 aaPredicted RBP13□□□□□ -0.33
KNTC1-208ENST00000535410 CCDC149Q6ZUS6 474 aa13□□□□□ -0.33
KNTC1-208ENST00000535410 TAS1R1Q7RTX1 841 aa13□□□□□ -0.33
KNTC1-208ENST00000535410 GPBP1Q86WP2 473 aa13□□□□□ -0.33
KNTC1-208ENST00000535410 CEP57Q86XR8 500 aa13□□□□□ -0.33
KNTC1-208ENST00000535410 ZDHHC14Q8IZN3 488 aa13□□□□□ -0.33
KNTC1-208ENST00000535410 MYCT1Q8N699 235 aa13□□□□□ -0.33
KNTC1-208ENST00000535410 C12orf76Q8N812 135 aaPredicted RBP13□□□□□ -0.33
KNTC1-208ENST00000535410 TDRD5Q8NAT2 981 aaKnown RBP13□□□□□ -0.33
KNTC1-208ENST00000535410 TMEM161BQ8NDZ6 487 aa13□□□□□ -0.33
KNTC1-208ENST00000535410 RAD54LQ92698 747 aa13□□□□□ -0.33
KNTC1-208ENST00000535410 KCNN1Q92952 543 aa13□□□□□ -0.33
KNTC1-208ENST00000535410 TSPAN18Q96SJ8 248 aa13□□□□□ -0.33
KNTC1-208ENST00000535410 CDT1Q9H211 546 aa13□□□□□ -0.33
KNTC1-208ENST00000535410 KCNH6Q9H252 994 aa13□□□□□ -0.33
KNTC1-208ENST00000535410 PLEKHA5Q9HAU0 1116 aa13□□□□□ -0.33
KNTC1-208ENST00000535410 MAN1C1Q9NR34 630 aa13□□□□□ -0.33
KNTC1-208ENST00000535410 ZDHHC7Q9NXF8 308 aa13□□□□□ -0.33
KNTC1-208ENST00000535410 STK17AQ9UEE5 414 aa13□□□□□ -0.33
KNTC1-208ENST00000535410 USP20Q9Y2K6 914 aa13□□□□□ -0.33
KNTC1-208ENST00000535410 SRPRBQ9Y5M8 271 aaKnown RBP13□□□□□ -0.33
KNTC1-208ENST00000535410 ATG2AQ2TAZ0 1938 aa13□□□□□ -0.33
KNTC1-208ENST00000535410 CCDC195A0A1B0GUA6 201 aa12.99□□□□□ -0.33
KNTC1-208ENST00000535410 STX6O43752 255 aa12.99□□□□□ -0.33
KNTC1-208ENST00000535410 KCNE1P15382 129 aa12.99□□□□□ -0.33
KNTC1-208ENST00000535410 PLCG1P19174 1290 aa12.99□□□□□ -0.33
KNTC1-208ENST00000535410 PROZP22891 400 aa12.99□□□□□ -0.33
KNTC1-208ENST00000535410 ZXDAP98168 799 aa12.99□□□□□ -0.33
KNTC1-208ENST00000535410 SIGLEC14Q08ET2 396 aa12.99□□□□□ -0.33
KNTC1-208ENST00000535410 DHX8Q14562 1220 aaKnown RBP12.99□□□□□ -0.33
KNTC1-208ENST00000535410 NOLC1Q14978 699 aaKnown RBP eCLIP12.99□□□□□ -0.33
KNTC1-208ENST00000535410 PTPN21Q16825 1174 aa12.99□□□□□ -0.33
KNTC1-208ENST00000535410 ARSHQ5FYA8 562 aa12.99□□□□□ -0.33
KNTC1-208ENST00000535410 XKR4Q5GH76 650 aa12.99□□□□□ -0.33
KNTC1-208ENST00000535410 RRAGBQ5VZM2 374 aa12.99□□□□□ -0.33
KNTC1-208ENST00000535410 ALKAL1Q6UXT8 129 aa12.99□□□□□ -0.33
KNTC1-208ENST00000535410 TRIM67Q6ZTA4 783 aa12.99□□□□□ -0.33
KNTC1-208ENST00000535410 RTL10Q7L3V2 364 aa12.99□□□□□ -0.33
KNTC1-208ENST00000535410 HAUS6Q7Z4H7 955 aa12.99□□□□□ -0.33
KNTC1-208ENST00000535410 BMP8AQ7Z5Y6 402 aa12.99□□□□□ -0.33
KNTC1-208ENST00000535410 HSCBQ8IWL3 235 aa12.99□□□□□ -0.33
KNTC1-208ENST00000535410 UBALD2Q8IYN6 164 aa12.99□□□□□ -0.33
KNTC1-208ENST00000535410 PIK3R5Q8WYR1 880 aa12.99□□□□□ -0.33
KNTC1-208ENST00000535410 LARP4BQ92615 738 aaKnown RBP12.99□□□□□ -0.33
KNTC1-208ENST00000535410 SNX21Q969T3 373 aa12.99□□□□□ -0.33
KNTC1-208ENST00000535410 PPP1R10Q96QC0 940 aaKnown RBP12.99□□□□□ -0.33
KNTC1-208ENST00000535410 POMKQ9H5K3 350 aa12.99□□□□□ -0.33
KNTC1-208ENST00000535410 PIDD1Q9HB75 910 aa12.99□□□□□ -0.33
KNTC1-208ENST00000535410 C11orf16Q9NQ32 467 aa12.99□□□□□ -0.33
KNTC1-208ENST00000535410 MORC2Q9Y6X9 1032 aaPredicted RBP12.99□□□□□ -0.33
KNTC1-208ENST00000535410 XPOTO43592 962 aaKnown RBP12.98□□□□□ -0.33
KNTC1-208ENST00000535410 TRAK2O60296 914 aa12.98□□□□□ -0.33
KNTC1-208ENST00000535410 KIF4AO95239 1232 aa12.98□□□□□ -0.33
KNTC1-208ENST00000535410 CLTAP09496 248 aa12.98□□□□□ -0.33
KNTC1-208ENST00000535410 LIG4P49917 911 aa12.98□□□□□ -0.33
KNTC1-208ENST00000535410 NCKAP1LP55160 1127 aa12.98□□□□□ -0.33
KNTC1-208ENST00000535410 OSTNP61366 133 aa12.98□□□□□ -0.33
KNTC1-208ENST00000535410 MCL1Q07820 350 aa12.98□□□□□ -0.33
KNTC1-208ENST00000535410 MTMR3Q13615 1198 aa12.98□□□□□ -0.33
KNTC1-208ENST00000535410 KARSQ15046 597 aaKnown RBP12.98□□□□□ -0.33
KNTC1-208ENST00000535410 UPP1Q16831 310 aa12.98□□□□□ -0.33
KNTC1-208ENST00000535410 LIN9Q5TKA1 542 aa12.98□□□□□ -0.33
KNTC1-208ENST00000535410 CCDC73Q6ZRK6 1079 aa12.98□□□□□ -0.33
KNTC1-208ENST00000535410 ANKS3Q6ZW76 656 aa12.98□□□□□ -0.33
KNTC1-208ENST00000535410 PALB2Q86YC2 1186 aa12.98□□□□□ -0.33
KNTC1-208ENST00000535410 RABGGTAQ92696 567 aa12.98□□□□□ -0.33
KNTC1-208ENST00000535410 ZNF396Q96N95 335 aaPredicted RBP12.98□□□□□ -0.33
KNTC1-208ENST00000535410 ZHX3Q9H4I2 956 aa12.98□□□□□ -0.33
KNTC1-208ENST00000535410 ANKFY1Q9P2R3 1169 aa12.98□□□□□ -0.33
KNTC1-208ENST00000535410 TBX20Q9UMR3 447 aa12.98□□□□□ -0.33
KNTC1-208ENST00000535410 NUB1Q9Y5A7 615 aa12.98□□□□□ -0.33
KNTC1-208ENST00000535410 CLIC4Q9Y696 253 aa12.98□□□□□ -0.33
KNTC1-208ENST00000535410 TGM5O43548 720 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 EDN1P05305 212 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 HNRNPA1P09651 372 aaKnown RBP eCLIP12.97□□□□□ -0.33
KNTC1-208ENST00000535410 ATXN8OSP0DMR3 200 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 HARSP12081 509 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms