RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 F8W810 466 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 PTGESO14684 152 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 SLC26A4O43511 780 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 TGM5O43548 720 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 B3GAT3O94766 335 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 BRD1O95696 1058 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 EFEMP2O95967 443 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 ASGR2P07307 311 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 RFX1P22670 979 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 GUCY2CP25092 1073 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 GJB2P29033 226 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 NPTX2P47972 431 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 PSMD5Q16401 504 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 FAM171A1Q5VUB5 890 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 EEF1DP3Q658K8 133 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 ARL6IP4Q66PJ3 421 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 ASTLQ6HA08 431 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 KANK3Q6NY19 840 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 CEP57Q86XR8 500 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 PALB2Q86YC2 1186 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 RASSF8Q8NHQ8 419 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 HASPINQ8TF76 798 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 PIK3R5Q8WYR1 880 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 B3GALT6Q96L58 329 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 AK8Q96MA6 479 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 TCHPQ9BT92 498 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 RUSC1Q9BVN2 902 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 TMEM134Q9H6X4 195 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 WDR6Q9NNW5 1121 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 IGSF9Q9P2J2 1179 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 ARHGAP28Q9P2N2 729 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 FBXL21Q9UKT6 434 aa9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-240ENST00000523912 VWA3AA6NCI4 1184 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 TTLL13PA6NNM8 815 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 PP2D1A8MPX8 630 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 E9PMD0 336 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 H0Y858 1186 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 TMEM189-UBE2V1I3L0A0 370 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 XYLBO75191 536 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 HNRNPA1P09651 372 aaKnown RBP eCLIP9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 MCF2P10911 925 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 PLS3P13797 630 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 RPL17P18621 184 aaKnown RBP9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 SCP2P22307 547 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 GRM5P41594 1212 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 TDGQ13569 410 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 GLRA4Q5JXX5 417 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 RTP2Q5QGT7 225 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 NT5DC1Q5TFE4 455 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 RINT1Q6NUQ1 792 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 DCLRE1AQ6PJP8 1040 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 MPZL3Q6UWV2 235 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 ERMP1Q7Z2K6 904 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 GLYCTKQ8IVS8 523 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 SPIRE2Q8WWL2 714 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 RABGGTAQ92696 567 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 NXPE3Q969Y0 559 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 CALML4Q96GE6 196 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 DDX27Q96GQ7 796 aaKnown RBP9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 PRKD2Q9BZL6 878 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 FAM86C1Q9NVL1 165 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 ANKFY1Q9P2R3 1169 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 EPS15L1Q9UBC2 864 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 FBXW11Q9UKB1 542 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 GTF3C3Q9Y5Q9 886 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 PLXNA3P51805 1871 aa9.72□□□□□ -0.85
CTNNA1-240ENST00000523912 GVINP1Q7Z2Y8 2422 aa9.71□□□□□ -0.85
CTNNA1-240ENST00000523912 PRR23AA6NEV1 266 aa9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 RFPL2O75678 378 aa9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 ZMYND10O75800 440 aa9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 PLA2G4BP0C869 781 aa9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 SPATA31D3P0C874 917 aa9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 MYBP10242 640 aa9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 HARSP12081 509 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 PDCP20941 246 aa9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 CDC25AP30304 524 aa9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 HOXA9P31269 272 aa9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 UBA7P41226 1012 aa9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 MATR3P43243 847 aaKnown RBP eCLIP9.71□□□□□ -0.866e-8■■■■□ 24.8
CTNNA1-240ENST00000523912 NOLC1Q14978 699 aaKnown RBP eCLIP9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 PPM1LQ5SGD2 360 aa9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 HYIQ5T013 277 aa9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 LARP1BQ659C4 914 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 PRSS55Q6UWB4 352 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 SPATA31D4Q6ZUB0 917 aa9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 ANKS3Q6ZW76 656 aa9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 C1orf186Q6ZWK4 172 aa9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 GET4Q7L5D6 327 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 BRAPQ7Z569 592 aa9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 TMEM105Q8N8V8 129 aa9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 BICD1Q96G01 975 aa9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 ACAP3Q96P50 834 aa9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 PPP1R10Q96QC0 940 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 ACO2Q99798 780 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 PAAF1Q9BRP4 392 aa9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 TARS2Q9BW92 718 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 CDT1Q9H211 546 aa9.71□□□□□ -0.86
CTNNA1-240ENST00000523912 SEMA4AQ9H3S1 761 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms