RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 SPTLC2O15270 562 aa19.58■□□□□ 0.72
TRAPPC9-211ENST00000521700 TRAK2O60296 914 aa19.58■□□□□ 0.72
TRAPPC9-211ENST00000521700 F13A1P00488 732 aa19.58■□□□□ 0.72
TRAPPC9-211ENST00000521700 HARSP12081 509 aaKnown RBP19.58■□□□□ 0.72
TRAPPC9-211ENST00000521700 KLRC2P26717 231 aa19.58■□□□□ 0.72
TRAPPC9-211ENST00000521700 GLUD2P49448 558 aa19.58■□□□□ 0.72
TRAPPC9-211ENST00000521700 YARSP54577 528 aaKnown RBP19.58■□□□□ 0.72
TRAPPC9-211ENST00000521700 DSG1Q02413 1049 aa19.58■□□□□ 0.72
TRAPPC9-211ENST00000521700 PKP1Q13835 747 aa19.58■□□□□ 0.72
TRAPPC9-211ENST00000521700 PPFIBP1Q86W92 1011 aa19.58■□□□□ 0.72
TRAPPC9-211ENST00000521700 B3GALT6Q96L58 329 aa19.58■□□□□ 0.72
TRAPPC9-211ENST00000521700 ACAP3Q96P50 834 aa19.58■□□□□ 0.72
TRAPPC9-211ENST00000521700 FIZ1Q96SL8 496 aa19.58■□□□□ 0.72
TRAPPC9-211ENST00000521700 EPHX3Q9H6B9 360 aa19.58■□□□□ 0.72
TRAPPC9-211ENST00000521700 RXFP1Q9HBX9 757 aa19.58■□□□□ 0.72
TRAPPC9-211ENST00000521700 TBX20Q9UMR3 447 aa19.58■□□□□ 0.72
TRAPPC9-211ENST00000521700 A0A087X0B3 334 aa19.57■□□□□ 0.72
TRAPPC9-211ENST00000521700 MEFVO15553 781 aaPredicted RBP19.57■□□□□ 0.72
TRAPPC9-211ENST00000521700 PPP6R2O75170 966 aa19.57■□□□□ 0.72
TRAPPC9-211ENST00000521700 TBCAO75347 108 aaKnown RBP19.57■□□□□ 0.72
TRAPPC9-211ENST00000521700 CLCN4P51793 760 aa19.57■□□□□ 0.72
TRAPPC9-211ENST00000521700 USP41Q3LFD5 358 aa19.57■□□□□ 0.72
TRAPPC9-211ENST00000521700 FOXD4L6Q3SYB3 417 aaPredicted RBP19.57■□□□□ 0.72
TRAPPC9-211ENST00000521700 TPRNQ4KMQ1 711 aa19.57■□□□□ 0.72
TRAPPC9-211ENST00000521700 SEZ6Q53EL9 994 aa19.57■□□□□ 0.72
TRAPPC9-211ENST00000521700 KIAA1841Q6NSI8 718 aa19.57■□□□□ 0.72
TRAPPC9-211ENST00000521700 FOXD4L3Q6VB84 417 aaPredicted RBP19.57■□□□□ 0.72
TRAPPC9-211ENST00000521700 CCDC73Q6ZRK6 1079 aa19.57■□□□□ 0.72
TRAPPC9-211ENST00000521700 SV2BQ7L1I2 683 aa19.57■□□□□ 0.72
TRAPPC9-211ENST00000521700 DYMQ7RTS9 669 aa19.57■□□□□ 0.72
TRAPPC9-211ENST00000521700 HASPINQ8TF76 798 aa19.57■□□□□ 0.72
TRAPPC9-211ENST00000521700 HAPLN2Q9GZV7 340 aa19.57■□□□□ 0.72
TRAPPC9-211ENST00000521700 TOPORSQ9NS56 1045 aaPredicted RBP19.57■□□□□ 0.72
TRAPPC9-211ENST00000521700 ANKFY1Q9P2R3 1169 aa19.57■□□□□ 0.72
TRAPPC9-211ENST00000521700 MYMKA6NI61 221 aa19.56■□□□□ 0.72
TRAPPC9-211ENST00000521700 K7ENM7 598 aa19.56■□□□□ 0.72
TRAPPC9-211ENST00000521700 TEX28O15482 410 aa19.56■□□□□ 0.72
TRAPPC9-211ENST00000521700 CLDN3O15551 220 aa19.56■□□□□ 0.72
TRAPPC9-211ENST00000521700 KIF4AO95239 1232 aa19.56■□□□□ 0.72
TRAPPC9-211ENST00000521700 YEATS4O95619 227 aa19.56■□□□□ 0.72
TRAPPC9-211ENST00000521700 SCP2P22307 547 aa19.56■□□□□ 0.72
TRAPPC9-211ENST00000521700 IGFBP6P24592 240 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC9-211ENST00000521700 NMT1P30419 496 aaKnown RBP19.56■□□□□ 0.72
TRAPPC9-211ENST00000521700 MCL1Q07820 350 aa19.56■□□□□ 0.72
TRAPPC9-211ENST00000521700 NOLC1Q14978 699 aaKnown RBP eCLIP19.56■□□□□ 0.72
TRAPPC9-211ENST00000521700 KANK3Q6NY19 840 aa19.56■□□□□ 0.72
TRAPPC9-211ENST00000521700 C12orf76Q8N812 135 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC9-211ENST00000521700 DDX12PQ92771 950 aa19.56■□□□□ 0.72
TRAPPC9-211ENST00000521700 BICD1Q96G01 975 aa19.56■□□□□ 0.72
TRAPPC9-211ENST00000521700 SNX27Q96L92 541 aa19.56■□□□□ 0.72
TRAPPC9-211ENST00000521700 ZMAT2Q96NC0 199 aaKnown RBP19.56■□□□□ 0.72
TRAPPC9-211ENST00000521700 POP1Q99575 1024 aaKnown RBP19.56■□□□□ 0.72
TRAPPC9-211ENST00000521700 PHF7Q9BWX1 381 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC9-211ENST00000521700 ADAM7Q9H2U9 754 aa19.56■□□□□ 0.72
TRAPPC9-211ENST00000521700 DZANK1Q9NVP4 752 aa19.56■□□□□ 0.72
TRAPPC9-211ENST00000521700 CDH22Q9UJ99 828 aa19.56■□□□□ 0.72
TRAPPC9-211ENST00000521700 C5orf42Q9H799 3197 aa19.55■□□□□ 0.72
TRAPPC9-211ENST00000521700 PI4K2BG5E9Z4 385 aa19.55■□□□□ 0.72
TRAPPC9-211ENST00000521700 KCNE1P15382 129 aa19.55■□□□□ 0.72
TRAPPC9-211ENST00000521700 STAT6P42226 847 aa19.55■□□□□ 0.72
TRAPPC9-211ENST00000521700 GTF2BQ00403 316 aa19.55■□□□□ 0.72
TRAPPC9-211ENST00000521700 SOX4Q06945 474 aaPredicted RBP19.55■□□□□ 0.72
TRAPPC9-211ENST00000521700 CBX2Q14781 532 aaPredicted RBP19.55■□□□□ 0.72
TRAPPC9-211ENST00000521700 SLC10A6Q3KNW5 377 aa19.55■□□□□ 0.72
TRAPPC9-211ENST00000521700 GPR65Q8IYL9 337 aa19.55■□□□□ 0.72
TRAPPC9-211ENST00000521700 DNAJC19Q96DA6 116 aa19.55■□□□□ 0.72
TRAPPC9-211ENST00000521700 GOLGA2P5Q9HBQ8 144 aa19.55■□□□□ 0.72
TRAPPC9-211ENST00000521700 CITO14578 2027 aa19.54■□□□□ 0.72
TRAPPC9-211ENST00000521700 SF3B1O75533 1304 aaKnown RBP eCLIP19.54■□□□□ 0.728e-6■■■■■ 107
TRAPPC9-211ENST00000521700 LOC730098B7Z3J9 87 aa19.54■□□□□ 0.72
TRAPPC9-211ENST00000521700 PIGRP01833 764 aa19.54■□□□□ 0.72
TRAPPC9-211ENST00000521700 MATR3P43243 847 aaKnown RBP eCLIP19.54■□□□□ 0.72
TRAPPC9-211ENST00000521700 LIG4P49917 911 aa19.54■□□□□ 0.72
TRAPPC9-211ENST00000521700 CLCNKBP51801 687 aa19.54■□□□□ 0.72
TRAPPC9-211ENST00000521700 ITIH3Q06033 890 aa19.54■□□□□ 0.72
TRAPPC9-211ENST00000521700 UPP1Q16831 310 aa19.54■□□□□ 0.72
TRAPPC9-211ENST00000521700 ZC2HC1CQ53FD0 456 aaPredicted RBP19.54■□□□□ 0.72
TRAPPC9-211ENST00000521700 RTP2Q5QGT7 225 aa19.54■□□□□ 0.72
TRAPPC9-211ENST00000521700 RARS2Q5T160 578 aaKnown RBP19.54■□□□□ 0.72
TRAPPC9-211ENST00000521700 FAM171A1Q5VUB5 890 aa19.54■□□□□ 0.72
TRAPPC9-211ENST00000521700 CES5AQ6NT32 575 aa19.54■□□□□ 0.72
TRAPPC9-211ENST00000521700 DCLRE1AQ6PJP8 1040 aa19.54■□□□□ 0.72
TRAPPC9-211ENST00000521700 CD300LGQ6UXG3 332 aa19.54■□□□□ 0.72
TRAPPC9-211ENST00000521700 PDILTQ8N807 584 aa19.54■□□□□ 0.72
TRAPPC9-211ENST00000521700 RIN2Q8WYP3 895 aaPredicted RBP19.54■□□□□ 0.72
TRAPPC9-211ENST00000521700 FBXL18Q96ME1 805 aa19.54■□□□□ 0.72
TRAPPC9-211ENST00000521700 ST6GALNAC4Q9H4F1 302 aa19.54■□□□□ 0.72
TRAPPC9-211ENST00000521700 CNTN3Q9P232 1028 aa19.54■□□□□ 0.72
TRAPPC9-211ENST00000521700 TMEM189-UBE2V1I3L0A0 370 aa19.53■□□□□ 0.72
TRAPPC9-211ENST00000521700 CUTAO60888 179 aa19.53■□□□□ 0.72
TRAPPC9-211ENST00000521700 B3GAT3O94766 335 aa19.53■□□□□ 0.72
TRAPPC9-211ENST00000521700 ADH1AP07327 375 aa19.53■□□□□ 0.72
TRAPPC9-211ENST00000521700 WEE2P0C1S8 567 aa19.53■□□□□ 0.72
TRAPPC9-211ENST00000521700 SLC39A4Q6P5W5 647 aa19.53■□□□□ 0.72
TRAPPC9-211ENST00000521700 SHC4Q6S5L8 630 aa19.53■□□□□ 0.72
TRAPPC9-211ENST00000521700 ZNF720Q7Z2F6 126 aa19.53■□□□□ 0.72
TRAPPC9-211ENST00000521700 SFR1Q86XK3 245 aa19.53■□□□□ 0.72
TRAPPC9-211ENST00000521700 FEZF2Q8TBJ5 459 aa19.53■□□□□ 0.72
TRAPPC9-211ENST00000521700 RPGRIP1Q96KN7 1286 aa19.53■□□□□ 0.72
TRAPPC9-211ENST00000521700 UROC1Q96N76 676 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms