RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 TUFT1Q9NNX1 390 aa15.84■□□□□ 0.13
USP38-202ENST00000510377 TOPORSQ9NS56 1045 aaPredicted RBP15.84■□□□□ 0.13
USP38-202ENST00000510377 GYG2O15488 501 aa15.83■□□□□ 0.13
USP38-202ENST00000510377 PPFIA2O75334 1257 aa15.83■□□□□ 0.13
USP38-202ENST00000510377 MYCNP04198 464 aaPredicted RBP15.83■□□□□ 0.13
USP38-202ENST00000510377 ARP10275 920 aa15.83■□□□□ 0.13
USP38-202ENST00000510377 ITIH2P19823 946 aa15.83■□□□□ 0.13
USP38-202ENST00000510377 SMAD1Q15797 465 aaKnown RBP15.83■□□□□ 0.13
USP38-202ENST00000510377 NAIF1Q69YI7 327 aaPredicted RBP15.83■□□□□ 0.13
USP38-202ENST00000510377 ZNF720Q7Z2F6 126 aa15.83■□□□□ 0.13
USP38-202ENST00000510377 FBXL13Q8NEE6 735 aa15.83■□□□□ 0.13
USP38-202ENST00000510377 CCDC110Q8TBZ0 833 aa15.83■□□□□ 0.13
USP38-202ENST00000510377 TMEM237Q96Q45 408 aa15.83■□□□□ 0.13
USP38-202ENST00000510377 TRAIPQ9BWF2 469 aa15.83■□□□□ 0.13
USP38-202ENST00000510377 SCAF8Q9UPN6 1271 aaKnown RBP15.83■□□□□ 0.13
USP38-202ENST00000510377 TMEM150BA6NC51 233 aa15.83■□□□□ 0.12
USP38-202ENST00000510377 DCTN3O75935 186 aa15.83■□□□□ 0.12
USP38-202ENST00000510377 CENPUQ71F23 418 aa15.83■□□□□ 0.12
USP38-202ENST00000510377 FAM84AQ96KN4 292 aa15.83■□□□□ 0.12
USP38-202ENST00000510377 MKNK1Q9BUB5 465 aa15.83■□□□□ 0.12
USP38-202ENST00000510377 UBN1Q9NPG3 1134 aa15.83■□□□□ 0.12
USP38-202ENST00000510377 DONSONQ9NYP3 566 aa15.83■□□□□ 0.12
USP38-202ENST00000510377 MAD1L1Q9Y6D9 718 aa15.83■□□□□ 0.12
USP38-202ENST00000510377 FAM47DPA6NHR8 397 aa15.83■□□□□ 0.12
USP38-202ENST00000510377 BPIFB4P59827 614 aa15.83■□□□□ 0.12
USP38-202ENST00000510377 DAB2IPQ5VWQ8 1189 aa15.83■□□□□ 0.12
USP38-202ENST00000510377 DUPD1Q68J44 220 aa15.83■□□□□ 0.12
USP38-202ENST00000510377 PHLDB3Q6NSJ2 640 aa15.83■□□□□ 0.12
USP38-202ENST00000510377 PRUNE1Q86TP1 453 aa15.83■□□□□ 0.12
USP38-202ENST00000510377 FBXO41Q8TF61 875 aa15.83■□□□□ 0.12
USP38-202ENST00000510377 MRPL47Q9HD33 250 aaKnown RBP15.83■□□□□ 0.12
USP38-202ENST00000510377 SLC12A6Q9UHW9 1150 aa15.83■□□□□ 0.12
USP38-202ENST00000510377 TCRBV7S2A1N4TA0A589 114 aa15.83■□□□□ 0.12
USP38-202ENST00000510377 CCND1P24385 295 aa15.83■□□□□ 0.12
USP38-202ENST00000510377 LMNB2Q03252 620 aa15.83■□□□□ 0.12
USP38-202ENST00000510377 AUHQ13825 339 aaKnown RBP15.83■□□□□ 0.12
USP38-202ENST00000510377 SNRNP35Q16560 246 aaKnown RBP15.83■□□□□ 0.12
USP38-202ENST00000510377 HIPK4Q8NE63 616 aa15.83■□□□□ 0.12
USP38-202ENST00000510377 PGM2Q96G03 612 aa15.83■□□□□ 0.12
USP38-202ENST00000510377 FBXO28Q9NVF7 368 aa15.83■□□□□ 0.12
USP38-202ENST00000510377 SCN11AQ9UI33 1791 aa15.82■□□□□ 0.12
USP38-202ENST00000510377 EIF3DO15371 548 aaKnown RBP eCLIP15.82■□□□□ 0.12
USP38-202ENST00000510377 MDH1BQ5I0G3 518 aa15.82■□□□□ 0.12
USP38-202ENST00000510377 APBB1IPQ7Z5R6 666 aaPredicted RBP15.82■□□□□ 0.12
USP38-202ENST00000510377 RFX6Q8HWS3 928 aa15.82■□□□□ 0.12
USP38-202ENST00000510377 ARHGAP24Q8N264 748 aa15.82■□□□□ 0.12
USP38-202ENST00000510377 ARMC2Q8NEN0 867 aa15.82■□□□□ 0.12
USP38-202ENST00000510377 TSC22D3Q99576 134 aa15.82■□□□□ 0.12
USP38-202ENST00000510377 PRM3Q9NNZ6 103 aa15.82■□□□□ 0.12
USP38-202ENST00000510377 CHST7Q9NS84 486 aa15.82■□□□□ 0.12
USP38-202ENST00000510377 DDTLA6NHG4 134 aaPredicted RBP15.82■□□□□ 0.12
USP38-202ENST00000510377 H7C0C1 242 aa15.82■□□□□ 0.12
USP38-202ENST00000510377 ASAP2O43150 1006 aa15.82■□□□□ 0.12
USP38-202ENST00000510377 KITP10721 976 aa15.82■□□□□ 0.12
USP38-202ENST00000510377 CHRNA5P30532 468 aa15.82■□□□□ 0.12
USP38-202ENST00000510377 ECE1P42892 770 aa15.82■□□□□ 0.12
USP38-202ENST00000510377 MAGEA4P43358 317 aa15.82■□□□□ 0.12
USP38-202ENST00000510377 QARSP47897 775 aaKnown RBP15.82■□□□□ 0.12
USP38-202ENST00000510377 ATP5OP48047 213 aa15.82■□□□□ 0.12
USP38-202ENST00000510377 OSTNP61366 133 aa15.82■□□□□ 0.12
USP38-202ENST00000510377 CDR2Q01850 454 aa15.82■□□□□ 0.12
USP38-202ENST00000510377 MTMR1Q13613 665 aa15.82■□□□□ 0.12
USP38-202ENST00000510377 CC2D2BQ6DHV5 1058 aa15.82■□□□□ 0.12
USP38-202ENST00000510377 CYFIP1Q7L576 1253 aa15.82■□□□□ 0.12
USP38-202ENST00000510377 SPIRE2Q8WWL2 714 aa15.82■□□□□ 0.12
USP38-202ENST00000510377 NXF1Q9UBU9 619 aaKnown RBP15.82■□□□□ 0.12
USP38-202ENST00000510377 STAM2O75886 525 aa15.82■□□□□ 0.12
USP38-202ENST00000510377 P4HBP07237 508 aaKnown RBP15.82■□□□□ 0.12
USP38-202ENST00000510377 KRT10P13645 584 aa15.82■□□□□ 0.12
USP38-202ENST00000510377 FNTAP49354 379 aa15.82■□□□□ 0.12
USP38-202ENST00000510377 POLGP54098 1239 aaPredicted RBP15.82■□□□□ 0.12
USP38-202ENST00000510377 ROPN1BQ9BZX4 212 aaPredicted RBP15.82■□□□□ 0.12
USP38-202ENST00000510377 UNC45AQ9H3U1 944 aa15.82■□□□□ 0.12
USP38-202ENST00000510377 ROPN1Q9HAT0 212 aaPredicted RBP15.82■□□□□ 0.12
USP38-202ENST00000510377 ATP6V0A4Q9HBG4 840 aa15.82■□□□□ 0.12
USP38-202ENST00000510377 CASZ1Q86V15 1759 aa15.81■□□□□ 0.12
USP38-202ENST00000510377 A8MUI8 341 aa15.81■□□□□ 0.12
USP38-202ENST00000510377 GHRP10912 638 aa15.81■□□□□ 0.12
USP38-202ENST00000510377 CREB1P16220 341 aa15.81■□□□□ 0.12
USP38-202ENST00000510377 PPP2R5DQ14738 602 aa15.81■□□□□ 0.12
USP38-202ENST00000510377 CNGA2Q16280 664 aa15.81■□□□□ 0.12
USP38-202ENST00000510377 POLR3CQ9BUI4 534 aaPredicted RBP15.81■□□□□ 0.12
USP38-202ENST00000510377 OSBPL8Q9BZF1 889 aa15.81■□□□□ 0.12
USP38-202ENST00000510377 MYH6P13533 1939 aa15.81■□□□□ 0.12
USP38-202ENST00000510377 DISP2A7MBM2 1401 aa15.81■□□□□ 0.12
USP38-202ENST00000510377 SNX3O60493 162 aa15.81■□□□□ 0.12
USP38-202ENST00000510377 OPHN1O60890 802 aa15.81■□□□□ 0.12
USP38-202ENST00000510377 PIAS1O75925 651 aa15.81■□□□□ 0.12
USP38-202ENST00000510377 SPATA31C1P0DKV0 1188 aa15.81■□□□□ 0.12
USP38-202ENST00000510377 ZBTB33Q86T24 672 aa15.81■□□□□ 0.12
USP38-202ENST00000510377 RHOT1Q8IXI2 618 aa15.81■□□□□ 0.12
USP38-202ENST00000510377 TTLL6Q8N841 843 aa15.81■□□□□ 0.12
USP38-202ENST00000510377 TRIM11Q96F44 468 aa15.81■□□□□ 0.12
USP38-202ENST00000510377 TXNDC16Q9P2K2 825 aa15.81■□□□□ 0.12
USP38-202ENST00000510377 PCSK1NQ9UHG2 260 aa15.81■□□□□ 0.12
USP38-202ENST00000510377 NEU2Q9Y3R4 380 aa15.81■□□□□ 0.12
USP38-202ENST00000510377 CCDC195A0A1B0GUA6 201 aa15.81■□□□□ 0.12
USP38-202ENST00000510377 TGFB1I1O43294 461 aa15.81■□□□□ 0.12
USP38-202ENST00000510377 RRM1P23921 792 aa15.81■□□□□ 0.12
USP38-202ENST00000510377 NOP14P78316 857 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms