RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 NSMFQ6X4W1 530 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 ANKS3Q6ZW76 656 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 CBLL1Q75N03 491 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 CTU1Q7Z7A3 348 aaKnown RBP6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 DPP9Q86TI2 863 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 FAM133AQ8N9E0 248 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 FBXO18Q8NFZ0 1043 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 CD99L2Q8TCZ2 262 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 NSUN6Q8TEA1 469 aaKnown RBP6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 PIBF1Q8WXW3 757 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 USP6NLQ92738 828 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 MISP3Q96FF7 219 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 C8orf76Q96K31 380 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 FBXL18Q96ME1 805 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 APBA2Q99767 749 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 PHF20Q9BVI0 1012 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 NRBP1Q9UHY1 535 aa6.24□□□□□ -1.41
HMGB1P44-201ENST00000508597 hCG_1642624A0A1W2PR95 340 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 NFIBO00712 420 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 MEIS2O14770 477 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 TNFRSF10CO14798 259 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 MAFGO15525 162 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 JAK2O60674 1132 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 CFBP00751 764 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 ESR1P03372 595 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 MMP1P03956 469 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 GUCY2CP25092 1073 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 GJB2P29033 226 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 ETV3P41162 512 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 KIR3DL1P43629 444 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 FLT3LGP49771 235 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 CLCN7P51798 805 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 LBX1P52954 281 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 BAATQ14032 418 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 RAB33AQ14088 237 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 LARP1BQ659C4 914 aaKnown RBP6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 ZNF746Q6NUN9 644 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 MAMDC4Q6UXC1 1216 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 OTOP1Q7RTM1 612 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 BLIDQ8IZY5 108 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 RAET1EQ8TD07 263 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 SYTL5Q8TDW5 730 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 MORC4Q8TE76 937 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 RNF141Q8WVD5 230 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 HNRNPLLQ8WVV9 542 aaKnown RBP6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 NAP1L4Q99733 375 aaKnown RBP6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 OSBPL2Q9H1P3 480 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 FOXP1Q9H334 677 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 HOMER2Q9NSB8 354 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 ACTR10Q9NZ32 417 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 VPS54Q9P1Q0 977 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 TRIM17Q9Y577 477 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 FRMPD4Q14CM0 1322 aa6.23□□□□□ -1.41
HMGB1P44-201ENST00000508597 C9IYK1 514 aa6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 H3BQV1 296 aa6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 PEX10O60683 326 aa6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 EIF3JO75822 258 aaKnown RBP6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 CYP3A4P08684 503 aa6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 EDNRBP24530 442 aa6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 CTGFP29279 349 aa6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 KRT2P35908 639 aa6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 ALDH5A1P51649 535 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 PRKCZQ05513 592 aa6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 IKZF1Q13422 519 aa6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 PLCL1Q15111 1095 aa6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 GNPTABQ3T906 1256 aa6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 ARHGEF16Q5VV41 709 aa6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 MFSD14CQ5VZR4 134 aa6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 KRT40Q6A162 431 aa6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 KCNV1Q6PIU1 500 aa6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 FBXO46Q6PJ61 603 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 MOXD1Q6UVY6 613 aa6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 ASB11Q8WXH4 323 aa6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 MAML3Q96JK9 1138 aa6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 RMDN3Q96TC7 470 aa6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 ARHGAP39Q9C0H5 1083 aa6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 CARS2Q9HA77 564 aaKnown RBP6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 PXMP2Q9NR77 195 aa6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 SIRPGQ9P1W8 387 aa6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 PCDHA6Q9UN73 950 aa6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 PTPN22Q9Y2R2 807 aa6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 PCDHA8Q9Y5H6 950 aa6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 MCM3APO60318 1980 aa6.22□□□□□ -1.41
HMGB1P44-201ENST00000508597 MYH7BA7E2Y1 1941 aa6.21□□□□□ -1.41
HMGB1P44-201ENST00000508597 LCTP09848 1927 aa6.21□□□□□ -1.41
HMGB1P44-201ENST00000508597 KIAA1217Q5T5P2 1943 aa6.21□□□□□ -1.41
HMGB1P44-201ENST00000508597 CCDC194A0A1B0GVG4 234 aa6.21□□□□□ -1.42
HMGB1P44-201ENST00000508597 ADCY3O60266 1144 aa6.21□□□□□ -1.42
HMGB1P44-201ENST00000508597 HMGCRP04035 888 aa6.21□□□□□ -1.42
HMGB1P44-201ENST00000508597 PGK2P07205 417 aa6.21□□□□□ -1.42
HMGB1P44-201ENST00000508597 TGFB3P10600 412 aa6.21□□□□□ -1.42
HMGB1P44-201ENST00000508597 GCFC2P16383 781 aaKnown RBP6.21□□□□□ -1.42
HMGB1P44-201ENST00000508597 TAL1P17542 331 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P44-201ENST00000508597 CYP2B6P20813 491 aa6.21□□□□□ -1.42
HMGB1P44-201ENST00000508597 U2AF2P26368 475 aaKnown RBP eCLIP6.21□□□□□ -1.42
HMGB1P44-201ENST00000508597 CCND2P30279 289 aa6.21□□□□□ -1.42
HMGB1P44-201ENST00000508597 CIITAP33076 1130 aa6.21□□□□□ -1.42
HMGB1P44-201ENST00000508597 SREBF1P36956 1147 aa6.21□□□□□ -1.42
HMGB1P44-201ENST00000508597 TRAPPC10P48553 1259 aa6.21□□□□□ -1.42
HMGB1P44-201ENST00000508597 UBXN2AP68543 259 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms