RNA–Protein interactions for RNA: ENST00000508472.5

DDR1-264, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 836 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-264ENST00000508472 FAM171A1Q5VUB5 890 aa17.12■□□□□ 0.33
DDR1-264ENST00000508472 EEF1DP3Q658K8 133 aa17.12■□□□□ 0.33
DDR1-264ENST00000508472 DCLRE1AQ6PJP8 1040 aa17.12■□□□□ 0.33
DDR1-264ENST00000508472 FBXL6Q8N531 539 aa17.12■□□□□ 0.33
DDR1-264ENST00000508472 DDX27Q96GQ7 796 aaKnown RBP17.12■□□□□ 0.33
DDR1-264ENST00000508472 PIDD1Q9HB75 910 aa17.12■□□□□ 0.33
DDR1-264ENST00000508472 ZDHHC7Q9NXF8 308 aa17.12■□□□□ 0.33
DDR1-264ENST00000508472 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.12■□□□□ 0.33
DDR1-264ENST00000508472 TRIOO75962 3097 aa17.12■□□□□ 0.33
DDR1-264ENST00000508472 PLXNA3P51805 1871 aa17.12■□□□□ 0.33
DDR1-264ENST00000508472 F8W810 466 aa17.11■□□□□ 0.33
DDR1-264ENST00000508472 TMEM189-UBE2V1I3L0A0 370 aa17.11■□□□□ 0.33
DDR1-264ENST00000508472 KIF4AO95239 1232 aa17.11■□□□□ 0.33
DDR1-264ENST00000508472 LONP1P36776 959 aaKnown RBP17.11■□□□□ 0.33
DDR1-264ENST00000508472 MPZL3Q6UWV2 235 aa17.11■□□□□ 0.33
DDR1-264ENST00000508472 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.11■□□□□ 0.33
DDR1-264ENST00000508472 CEP57Q86XR8 500 aa17.11■□□□□ 0.33
DDR1-264ENST00000508472 PALB2Q86YC2 1186 aa17.11■□□□□ 0.33
DDR1-264ENST00000508472 DAW1Q8N136 415 aa17.11■□□□□ 0.33
DDR1-264ENST00000508472 PIK3R5Q8WYR1 880 aa17.11■□□□□ 0.33
DDR1-264ENST00000508472 ACAP3Q96P50 834 aa17.11■□□□□ 0.33
DDR1-264ENST00000508472 CDH22Q9UJ99 828 aa17.11■□□□□ 0.33
DDR1-264ENST00000508472 ODF2LQ9ULJ1 636 aa17.11■□□□□ 0.33
DDR1-264ENST00000508472 C2orf16Q68DN1 1984 aa17.1■□□□□ 0.33
DDR1-264ENST00000508472 VPS37CA5D8V6 355 aaPredicted RBP17.1■□□□□ 0.33
DDR1-264ENST00000508472 SLC16A4O15374 487 aa17.1■□□□□ 0.33
DDR1-264ENST00000508472 TGM5O43548 720 aa17.1■□□□□ 0.33
DDR1-264ENST00000508472 TOM1L1O75674 476 aa17.1■□□□□ 0.33
DDR1-264ENST00000508472 B3GAT3O94766 335 aa17.1■□□□□ 0.33
DDR1-264ENST00000508472 EDN1P05305 212 aa17.1■□□□□ 0.33
DDR1-264ENST00000508472 SLC12A3P55017 1021 aa17.1■□□□□ 0.33
DDR1-264ENST00000508472 PSMD5Q16401 504 aa17.1■□□□□ 0.33
DDR1-264ENST00000508472 LIN9Q5TKA1 542 aa17.1■□□□□ 0.33
DDR1-264ENST00000508472 KANK3Q6NY19 840 aa17.1■□□□□ 0.33
DDR1-264ENST00000508472 ZPBP2Q6X784 338 aa17.1■□□□□ 0.33
DDR1-264ENST00000508472 HASPINQ8TF76 798 aa17.1■□□□□ 0.33
DDR1-264ENST00000508472 SMG7Q92540 1137 aaKnown RBP17.1■□□□□ 0.33
DDR1-264ENST00000508472 RABGGTAQ92696 567 aa17.1■□□□□ 0.33
DDR1-264ENST00000508472 B3GALT6Q96L58 329 aa17.1■□□□□ 0.33
DDR1-264ENST00000508472 PPP1R10Q96QC0 940 aaKnown RBP17.1■□□□□ 0.33
DDR1-264ENST00000508472 PAAF1Q9BRP4 392 aa17.1■□□□□ 0.33
DDR1-264ENST00000508472 CDT1Q9H211 546 aa17.1■□□□□ 0.33
DDR1-264ENST00000508472 PTPRHQ9HD43 1115 aa17.1■□□□□ 0.33
DDR1-264ENST00000508472 WDR6Q9NNW5 1121 aaKnown RBP17.1■□□□□ 0.33
DDR1-264ENST00000508472 LIMD1Q9UGP4 676 aa17.1■□□□□ 0.33
DDR1-264ENST00000508472 USP20Q9Y2K6 914 aa17.1■□□□□ 0.33
DDR1-264ENST00000508472 CITO14578 2027 aa17.09■□□□□ 0.33
DDR1-264ENST00000508472 TECTAO75443 2155 aa17.09■□□□□ 0.33
DDR1-264ENST00000508472 SFI1A8K8P3 1242 aa17.09■□□□□ 0.33
DDR1-264ENST00000508472 BRD1O95696 1058 aa17.09■□□□□ 0.33
DDR1-264ENST00000508472 KRT18P05783 430 aaKnown RBP17.09■□□□□ 0.33
DDR1-264ENST00000508472 MATR3P43243 847 aaKnown RBP eCLIP17.09■□□□□ 0.33
DDR1-264ENST00000508472 RAD51AP2Q09MP3 1159 aa17.09■□□□□ 0.33
DDR1-264ENST00000508472 MAPK7Q13164 816 aa17.09■□□□□ 0.33
DDR1-264ENST00000508472 CUL4AQ13619 759 aa17.09■□□□□ 0.33
DDR1-264ENST00000508472 NAB2Q15742 525 aa17.09■□□□□ 0.33
DDR1-264ENST00000508472 KYAT1Q16773 422 aa17.09■□□□□ 0.33
DDR1-264ENST00000508472 TMEM119Q4V9L6 283 aa17.09■□□□□ 0.33
DDR1-264ENST00000508472 RTP2Q5QGT7 225 aa17.09■□□□□ 0.33
DDR1-264ENST00000508472 RTL10Q7L3V2 364 aa17.09■□□□□ 0.33
DDR1-264ENST00000508472 KCNK18Q7Z418 384 aa17.09■□□□□ 0.33
DDR1-264ENST00000508472 PNMA5Q96PV4 448 aa17.09■□□□□ 0.33
DDR1-264ENST00000508472 PLIN2Q99541 437 aa17.09■□□□□ 0.33
DDR1-264ENST00000508472 TARS2Q9BW92 718 aaKnown RBP17.09■□□□□ 0.33
DDR1-264ENST00000508472 IGSF9Q9P2J2 1179 aa17.09■□□□□ 0.33
DDR1-264ENST00000508472 TRIP11Q15643 1979 aa17.08■□□□□ 0.33
DDR1-264ENST00000508472 CLUHO75153 1309 aa17.08■□□□□ 0.32
DDR1-264ENST00000508472 SMIM28A0A1B0GU29 152 aa17.08■□□□□ 0.32
DDR1-264ENST00000508472 CLDN3O15551 220 aa17.08■□□□□ 0.32
DDR1-264ENST00000508472 PROZP22891 400 aa17.08■□□□□ 0.32
DDR1-264ENST00000508472 GBP2P32456 591 aaPredicted RBP17.08■□□□□ 0.32
DDR1-264ENST00000508472 RPL9P32969 192 aaKnown RBP17.08■□□□□ 0.32
DDR1-264ENST00000508472 CLCNKBP51801 687 aa17.08■□□□□ 0.32
DDR1-264ENST00000508472 OSTNP61366 133 aa17.08■□□□□ 0.32
DDR1-264ENST00000508472 NOLC1Q14978 699 aaKnown RBP eCLIP17.08■□□□□ 0.32
DDR1-264ENST00000508472 UPP1Q16831 310 aa17.08■□□□□ 0.32
DDR1-264ENST00000508472 GLRA4Q5JXX5 417 aa17.08■□□□□ 0.32
DDR1-264ENST00000508472 LILRA6Q6PI73 481 aa17.08■□□□□ 0.32
DDR1-264ENST00000508472 PRSS55Q6UWB4 352 aaPredicted RBP17.08■□□□□ 0.32
DDR1-264ENST00000508472 ANKS3Q6ZW76 656 aa17.08■□□□□ 0.32
DDR1-264ENST00000508472 GLYCTKQ8IVS8 523 aa17.08■□□□□ 0.32
DDR1-264ENST00000508472 NXPE3Q969Y0 559 aa17.08■□□□□ 0.32
DDR1-264ENST00000508472 ASIC4Q96FT7 647 aa17.08■□□□□ 0.32
DDR1-264ENST00000508472 BICD1Q96G01 975 aa17.08■□□□□ 0.32
DDR1-264ENST00000508472 PRKD2Q9BZL6 878 aa17.08■□□□□ 0.32
DDR1-264ENST00000508472 IRF2BPLQ9H1B7 796 aa17.08■□□□□ 0.32
DDR1-264ENST00000508472 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.08■□□□□ 0.32
DDR1-264ENST00000508472 ANKFY1Q9P2R3 1169 aa17.08■□□□□ 0.32
DDR1-264ENST00000508472 CACNG4Q9UBN1 327 aa17.08■□□□□ 0.32
DDR1-264ENST00000508472 MYO10Q9HD67 2058 aa17.08■□□□□ 0.32
DDR1-264ENST00000508472 XYLBO75191 536 aa17.07■□□□□ 0.32
DDR1-264ENST00000508472 RFPL2O75678 378 aa17.07■□□□□ 0.32
DDR1-264ENST00000508472 ZMYND10O75800 440 aa17.07■□□□□ 0.32
DDR1-264ENST00000508472 FAM13AO94988 1023 aa17.07■□□□□ 0.32
DDR1-264ENST00000508472 PAPLNO95428 1278 aa17.07■□□□□ 0.32
DDR1-264ENST00000508472 HNRNPA1P09651 372 aaKnown RBP eCLIP17.07■□□□□ 0.32
DDR1-264ENST00000508472 SPATA31D3P0C874 917 aa17.07■□□□□ 0.32
DDR1-264ENST00000508472 MAPTP10636 758 aaKnown RBP17.07■□□□□ 0.32
DDR1-264ENST00000508472 KCNE1P15382 129 aa17.07■□□□□ 0.32
DDR1-264ENST00000508472 TXLNAP40222 546 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms