RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 RCCD1A6NED2 376 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 RRN3P2A6NIE6 340 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 ACKR2O00590 384 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 B4GALT5O43286 388 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 ZC3H11AO75152 810 aaKnown RBP eCLIP8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 ERLIN2O94905 339 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 HLA-DRAP01903 254 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 PROZP22891 400 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 TNFSF9P41273 254 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 MAGEA1P43355 309 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 GPC3P51654 580 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 WNT7BP56706 349 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 BEX3Q00994 111 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 PTK2Q05397 1052 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 PRKCZQ05513 592 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 MCL1Q07820 350 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 KIF22Q14807 665 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 FSCN1Q16658 493 aaKnown RBP8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 FAM187BQ17R55 369 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 ASTE1Q2TB18 679 aaPredicted RBP8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 SEZ6Q53EL9 994 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 TDRD10Q5VZ19 366 aaKnown RBP8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 PHLDB3Q6NSJ2 640 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 NFRKBQ6P4R8 1299 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 CRELD2Q6UXH1 353 aaPredicted RBP8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 TSHZ1Q6ZSZ6 1077 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 ZNF571Q7Z3V5 609 aaPredicted RBP8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 ZNF410Q86VK4 478 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 TAS1R2Q8TE23 839 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 TRIB2Q92519 343 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 SEMA4DQ92854 862 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 FAM84AQ96KN4 292 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 POP1Q99575 1024 aaKnown RBP8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 FDXACB1Q9BRP7 624 aaPredicted RBP8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 TCHPQ9BT92 498 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 IRX2Q9BZI1 471 aaPredicted RBP8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 IMPG2Q9BZV3 1241 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 GPR88Q9GZN0 384 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 FAM49AQ9H0Q0 323 aaPredicted RBP8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 CDT1Q9H211 546 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 PDE11AQ9HCR9 933 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 UBE2TQ9NPD8 197 aaPredicted RBP8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 SEPT11Q9NVA2 429 aaKnown RBP8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 GJD2Q9UKL4 321 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 GABRQQ9UN88 632 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 COQ4Q9Y3A0 265 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 Q9Y3F1 56 aa8.72□□□□□ -1.01
PDZRN3-212ENST00000498048 MICAL3Q7RTP6 2002 aa8.71□□□□□ -1.01
PDZRN3-212ENST00000498048 A0A087X0T9 212 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 C2orf72A6NCS6 295 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 ABLIM1O14639 778 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 PJA2O43164 708 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 FAM189A1O60320 539 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 TACC1O75410 805 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 SLU7O95391 586 aaKnown RBP8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 ABL1P00519 1130 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 C6orf222P0C671 652 aaPredicted RBP8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 TMEM191BP0C7N4 346 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 FAM228BP0C875 321 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 CYP2C9P11712 490 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 GTF2F1P35269 517 aaKnown RBP eCLIP8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 USP8P40818 1118 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 PDE6CP51160 858 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 MFAP3P55082 362 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 MCCD1P59942 119 aaPredicted RBP8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 POU5F1BQ06416 359 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 BMS1Q14692 1282 aaKnown RBP8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 SURF1Q15526 300 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 ZACNQ401N2 412 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 EEF1DP3Q658K8 133 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 C15orf39Q6ZRI6 1047 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 SV2AQ7L0J3 742 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 IRF2BP2Q7Z5L9 587 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 WDR49Q8IV35 697 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 MNS1Q8NEH6 495 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 LNX1Q8TBB1 728 aaPredicted RBP8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 KAT2BQ92831 832 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 KAT5Q92993 513 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 FAM81BQ96LP2 452 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 LACRTQ9GZZ8 138 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 FZD8Q9H461 694 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 PDZD7Q9H5P4 517 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 MINDY3Q9H8M7 445 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 L2HGDHQ9H9P8 463 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 IFT122Q9HBG6 1241 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 SETD4Q9NVD3 440 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 RAB20Q9NX57 234 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 TNFSF13BQ9Y275 285 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 MRFAP1Q9Y605 127 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 CAPN6Q9Y6Q1 641 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 NCANO14594 1321 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 NRCAMQ92823 1304 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 SCN5AQ14524 2016 aa8.71□□□□□ -1.02
PDZRN3-212ENST00000498048 SMIM35A0A1B0GVV1 85 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 ANO9A1A5B4 782 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 MYADML2A6NDP7 307 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 HAS3O00219 553 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 DYNC1I1O14576 645 aa8.7□□□□□ -1.02
PDZRN3-212ENST00000498048 TSPAN1O60635 241 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms