RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 EVA1CP58658 441 aa7□□□□□ -1.29
NCKAP1-208ENST00000495619 RAP2BP61225 183 aa7□□□□□ -1.29
NCKAP1-208ENST00000495619 CREMQ03060 361 aa7□□□□□ -1.29
NCKAP1-208ENST00000495619 PTPN21Q16825 1174 aa7□□□□□ -1.29
NCKAP1-208ENST00000495619 TIGD2Q4W5G0 525 aa7□□□□□ -1.29
NCKAP1-208ENST00000495619 LY6G5CQ5SRR4 150 aa7□□□□□ -1.29
NCKAP1-208ENST00000495619 RSPH3Q86UC2 560 aa7□□□□□ -1.29
NCKAP1-208ENST00000495619 PLXDC1Q8IUK5 500 aa7□□□□□ -1.29
NCKAP1-208ENST00000495619 RHOT1Q8IXI2 618 aa7□□□□□ -1.29
NCKAP1-208ENST00000495619 NRG4Q8WWG1 115 aa7□□□□□ -1.29
NCKAP1-208ENST00000495619 STON2Q8WXE9 905 aa7□□□□□ -1.29
NCKAP1-208ENST00000495619 HOXB13Q92826 284 aaPredicted RBP7□□□□□ -1.29
NCKAP1-208ENST00000495619 CLIP3Q96DZ5 547 aa7□□□□□ -1.29
NCKAP1-208ENST00000495619 FZD1Q9UP38 647 aa7□□□□□ -1.29
NCKAP1-208ENST00000495619 hCG_2014768A0A024R1R8 64 aa6.99□□□□□ -1.29
NCKAP1-208ENST00000495619 GABRDO14764 452 aa6.99□□□□□ -1.29
NCKAP1-208ENST00000495619 GUCY1A2P33402 732 aa6.99□□□□□ -1.29
NCKAP1-208ENST00000495619 SLC25A3Q00325 362 aa6.99□□□□□ -1.29
NCKAP1-208ENST00000495619 OTUD7BQ6GQQ9 843 aa6.99□□□□□ -1.29
NCKAP1-208ENST00000495619 FAM177A1Q8N128 213 aaPredicted RBP6.99□□□□□ -1.29
NCKAP1-208ENST00000495619 RNF169Q8NCN4 708 aa6.99□□□□□ -1.29
NCKAP1-208ENST00000495619 FBXO18Q8NFZ0 1043 aa6.99□□□□□ -1.29
NCKAP1-208ENST00000495619 NEU4Q8WWR8 484 aaPredicted RBP6.99□□□□□ -1.29
NCKAP1-208ENST00000495619 LENG9Q96B70 501 aa6.99□□□□□ -1.29
NCKAP1-208ENST00000495619 PHACTR3Q96KR7 559 aa6.99□□□□□ -1.29
NCKAP1-208ENST00000495619 SORCS2Q96PQ0 1159 aa6.99□□□□□ -1.29
NCKAP1-208ENST00000495619 SLC13A1Q9BZW2 595 aa6.99□□□□□ -1.29
NCKAP1-208ENST00000495619 LDAHQ9H6V9 325 aa6.99□□□□□ -1.29
NCKAP1-208ENST00000495619 TDP1Q9NUW8 608 aa6.99□□□□□ -1.29
NCKAP1-208ENST00000495619 ATP11BQ9Y2G3 1177 aa6.99□□□□□ -1.29
NCKAP1-208ENST00000495619 SHROOM4Q9ULL8 1493 aa6.98□□□□□ -1.29
NCKAP1-208ENST00000495619 LOC105371045A0A1W2PR82 267 aa6.98□□□□□ -1.29
NCKAP1-208ENST00000495619 GRXCR1A8MXD5 290 aa6.98□□□□□ -1.29
NCKAP1-208ENST00000495619 SNUPNO95149 360 aaKnown RBP6.98□□□□□ -1.29
NCKAP1-208ENST00000495619 ITGB1P05556 798 aa6.98□□□□□ -1.29
NCKAP1-208ENST00000495619 RNASE9P60153 205 aaKnown RBP6.98□□□□□ -1.29
NCKAP1-208ENST00000495619 TGFB2P61812 414 aa6.98□□□□□ -1.29
NCKAP1-208ENST00000495619 FHL2Q14192 279 aa6.98□□□□□ -1.29
NCKAP1-208ENST00000495619 SEPT2Q15019 361 aa6.98□□□□□ -1.29
NCKAP1-208ENST00000495619 PTPAQ15257 358 aa6.98□□□□□ -1.29
NCKAP1-208ENST00000495619 KCNV1Q6PIU1 500 aa6.98□□□□□ -1.29
NCKAP1-208ENST00000495619 ZFPM1Q8IX07 1006 aa6.98□□□□□ -1.29
NCKAP1-208ENST00000495619 SLC35B2Q8TB61 432 aa6.98□□□□□ -1.29
NCKAP1-208ENST00000495619 KRTAP4-11Q9BYQ6 195 aa6.98□□□□□ -1.29
NCKAP1-208ENST00000495619 FAM30AQ9NZY2 134 aa6.98□□□□□ -1.29
NCKAP1-208ENST00000495619 MYBBP1AQ9BQG0 1328 aaKnown RBP6.98□□□□□ -1.29
NCKAP1-208ENST00000495619 ATRNL1Q5VV63 1379 aa6.97□□□□□ -1.29
NCKAP1-208ENST00000495619 TMEM191CA6NGB0 347 aa6.97□□□□□ -1.29
NCKAP1-208ENST00000495619 DRGXA6NNA5 263 aa6.97□□□□□ -1.29
NCKAP1-208ENST00000495619 LEFTY2O00292 366 aa6.97□□□□□ -1.29
NCKAP1-208ENST00000495619 ABHD16AO95870 558 aa6.97□□□□□ -1.29
NCKAP1-208ENST00000495619 DDCP20711 480 aa6.97□□□□□ -1.29
NCKAP1-208ENST00000495619 KIF23Q02241 960 aaPredicted RBP6.97□□□□□ -1.29
NCKAP1-208ENST00000495619 SPDYE7PQ495Y7 208 aa6.97□□□□□ -1.29
NCKAP1-208ENST00000495619 FNDC7Q5VTL7 733 aa6.97□□□□□ -1.29
NCKAP1-208ENST00000495619 ARMC6Q6NXE6 501 aa6.97□□□□□ -1.29
NCKAP1-208ENST00000495619 MED25Q71SY5 747 aa6.97□□□□□ -1.29
NCKAP1-208ENST00000495619 MIER2Q8N344 545 aa6.97□□□□□ -1.29
NCKAP1-208ENST00000495619 AMER2Q8N7J2 671 aa6.97□□□□□ -1.29
NCKAP1-208ENST00000495619 NLGN4YQ8NFZ3 816 aaPredicted RBP6.97□□□□□ -1.29
NCKAP1-208ENST00000495619 DPF2Q92785 391 aa6.97□□□□□ -1.29
NCKAP1-208ENST00000495619 SMAD5Q99717 465 aaKnown RBP6.97□□□□□ -1.29
NCKAP1-208ENST00000495619 PRRX2Q99811 253 aa6.97□□□□□ -1.29
NCKAP1-208ENST00000495619 USP15Q9Y4E8 981 aaPredicted RBP6.97□□□□□ -1.29
NCKAP1-208ENST00000495619 C5AR1P21730 350 aa6.96□□□□□ -1.3
NCKAP1-208ENST00000495619 CHN2P52757 468 aa6.96□□□□□ -1.3
NCKAP1-208ENST00000495619 HMGA2P52926 109 aa6.96□□□□□ -1.3
NCKAP1-208ENST00000495619 IGBP1P78318 339 aa6.96□□□□□ -1.3
NCKAP1-208ENST00000495619 UBXN2BQ14CS0 331 aa6.96□□□□□ -1.3
NCKAP1-208ENST00000495619 PCBP2Q15366 365 aaKnown RBP eCLIP6.96□□□□□ -1.3
NCKAP1-208ENST00000495619 ZNF529Q6P280 563 aa6.96□□□□□ -1.3
NCKAP1-208ENST00000495619 LRRC55Q6ZSA7 311 aa6.96□□□□□ -1.3
NCKAP1-208ENST00000495619 MYEOVQ96EZ4 313 aa6.96□□□□□ -1.3
NCKAP1-208ENST00000495619 TEKT5Q96M29 485 aa6.96□□□□□ -1.3
NCKAP1-208ENST00000495619 CEP89Q96ST8 783 aa6.96□□□□□ -1.3
NCKAP1-208ENST00000495619 KRTAP4-2Q9BYR5 136 aa6.96□□□□□ -1.3
NCKAP1-208ENST00000495619 SCAND2PQ9GZW5 306 aaPredicted RBP6.96□□□□□ -1.3
NCKAP1-208ENST00000495619 AKIP1Q9NQ31 210 aa6.96□□□□□ -1.3
NCKAP1-208ENST00000495619 MAN1C1Q9NR34 630 aa6.96□□□□□ -1.3
NCKAP1-208ENST00000495619 SIK3Q9Y2K2 1263 aa6.96□□□□□ -1.3
NCKAP1-208ENST00000495619 ACTL7AQ9Y615 435 aa6.96□□□□□ -1.3
NCKAP1-208ENST00000495619 AHRRA9YTQ3 701 aa6.95□□□□□ -1.3
NCKAP1-208ENST00000495619 SGTAO43765 313 aa6.95□□□□□ -1.3
NCKAP1-208ENST00000495619 ZSCAN20P17040 1043 aaPredicted RBP6.95□□□□□ -1.3
NCKAP1-208ENST00000495619 RECQLP46063 649 aaPredicted RBP6.95□□□□□ -1.3
NCKAP1-208ENST00000495619 ALDH1A3P47895 512 aa6.95□□□□□ -1.3
NCKAP1-208ENST00000495619 SLC6A9P48067 706 aa6.95□□□□□ -1.3
NCKAP1-208ENST00000495619 ADKP55263 362 aaKnown RBP6.95□□□□□ -1.3
NCKAP1-208ENST00000495619 CDC42EP1Q00587 391 aa6.95□□□□□ -1.3
NCKAP1-208ENST00000495619 SEM1Q6ZVN7 128 aa6.95□□□□□ -1.3
NCKAP1-208ENST00000495619 PROKR1Q8TCW9 393 aa6.95□□□□□ -1.3
NCKAP1-208ENST00000495619 MRIQ9BWK5 157 aa6.95□□□□□ -1.3
NCKAP1-208ENST00000495619 PCED1AQ9H1Q7 454 aa6.95□□□□□ -1.3
NCKAP1-208ENST00000495619 GPRC5BQ9NZH0 403 aa6.95□□□□□ -1.3
NCKAP1-208ENST00000495619 FPGT-TNNI3KV9GXZ4 949 aa6.95□□□□□ -1.3
NCKAP1-208ENST00000495619 PCDHGA12O60330 932 aa6.94□□□□□ -1.3
NCKAP1-208ENST00000495619 EXOSC10Q01780 885 aaKnown RBP6.94□□□□□ -1.3
NCKAP1-208ENST00000495619 MTM1Q13496 603 aa6.94□□□□□ -1.3
NCKAP1-208ENST00000495619 UAP1L1Q3KQV9 507 aa6.94□□□□□ -1.3
NCKAP1-208ENST00000495619 FAM102AQ5T9C2 384 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms