RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 LIMA1Q9UHB6 759 aaKnown RBP20.23■□□□□ 0.83
MCF2L-230ENST00000491028 TTC26A0AVF1 554 aa20.22■□□□□ 0.83
MCF2L-230ENST00000491028 RBAK-RBAKDNI3L0D1 243 aa20.22■□□□□ 0.83
MCF2L-230ENST00000491028 MAN2A1Q16706 1144 aa20.22■□□□□ 0.83
MCF2L-230ENST00000491028 SLC10A6Q3KNW5 377 aa20.22■□□□□ 0.83
MCF2L-230ENST00000491028 PARD3BQ8TEW8 1205 aa20.22■□□□□ 0.83
MCF2L-230ENST00000491028 RSPH1Q8WYR4 309 aa20.22■□□□□ 0.83
MCF2L-230ENST00000491028 FNBP1Q96RU3 617 aa20.22■□□□□ 0.83
MCF2L-230ENST00000491028 TSPAN18Q96SJ8 248 aa20.22■□□□□ 0.83
MCF2L-230ENST00000491028 TUBGCP2Q9BSJ2 902 aa20.22■□□□□ 0.83
MCF2L-230ENST00000491028 PARP2Q9UGN5 583 aa20.22■□□□□ 0.83
MCF2L-230ENST00000491028 TTC3P53804 2025 aa20.22■□□□□ 0.83
MCF2L-230ENST00000491028 STX10O60499 249 aa20.21■□□□□ 0.83
MCF2L-230ENST00000491028 FGBP02675 491 aa20.21■□□□□ 0.83
MCF2L-230ENST00000491028 TPM2P07951 284 aa20.21■□□□□ 0.83
MCF2L-230ENST00000491028 ACRP10323 421 aa20.21■□□□□ 0.83
MCF2L-230ENST00000491028 ATP1A3P13637 1013 aa20.21■□□□□ 0.83
MCF2L-230ENST00000491028 AKAP5P24588 427 aa20.21■□□□□ 0.83
MCF2L-230ENST00000491028 KRT31Q15323 416 aa20.21■□□□□ 0.83
MCF2L-230ENST00000491028 XKR4Q5GH76 650 aa20.21■□□□□ 0.83
MCF2L-230ENST00000491028 DCAF17Q5H9S7 520 aaPredicted RBP20.21■□□□□ 0.83
MCF2L-230ENST00000491028 AGMOQ6ZNB7 445 aa20.21■□□□□ 0.83
MCF2L-230ENST00000491028 NT5DC4Q86YG4 428 aa20.21■□□□□ 0.83
MCF2L-230ENST00000491028 NPAS4Q8IUM7 802 aa20.21■□□□□ 0.83
MCF2L-230ENST00000491028 CREBRFQ8IUR6 639 aa20.21■□□□□ 0.83
MCF2L-230ENST00000491028 CGRRF1Q99675 332 aa20.21■□□□□ 0.83
MCF2L-230ENST00000491028 RNF39Q9H2S5 420 aa20.21■□□□□ 0.83
MCF2L-230ENST00000491028 RSAD1Q9HA92 442 aa20.21■□□□□ 0.83
MCF2L-230ENST00000491028 PDE11AQ9HCR9 933 aa20.21■□□□□ 0.83
MCF2L-230ENST00000491028 CNTN3Q9P232 1028 aa20.21■□□□□ 0.83
MCF2L-230ENST00000491028 DERAQ9Y315 318 aa20.21■□□□□ 0.83
MCF2L-230ENST00000491028 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.21■□□□□ 0.83
MCF2L-230ENST00000491028 GOLGA6L3A6NEY3 463 aa20.2■□□□□ 0.82
MCF2L-230ENST00000491028 LRRC10BA6NIK2 292 aa20.2■□□□□ 0.82
MCF2L-230ENST00000491028 LRRIQ3A6PVS8 624 aaPredicted RBP20.2■□□□□ 0.82
MCF2L-230ENST00000491028 INPPL1O15357 1258 aa20.2■□□□□ 0.82
MCF2L-230ENST00000491028 HOXA2O43364 376 aa20.2■□□□□ 0.82
MCF2L-230ENST00000491028 AMHP03971 560 aa20.2■□□□□ 0.82
MCF2L-230ENST00000491028 PRKCSHP14314 528 aaPredicted RBP20.2■□□□□ 0.82
MCF2L-230ENST00000491028 CLDN10P78369 228 aa20.2■□□□□ 0.82
MCF2L-230ENST00000491028 TCERG1LQ5VWI1 586 aa20.2■□□□□ 0.82
MCF2L-230ENST00000491028 ALKAL1Q6UXT8 129 aa20.2■□□□□ 0.82
MCF2L-230ENST00000491028 C16orf59Q7L2K0 433 aa20.2■□□□□ 0.82
MCF2L-230ENST00000491028 WDR49Q8IV35 697 aa20.2■□□□□ 0.82
MCF2L-230ENST00000491028 RNF169Q8NCN4 708 aa20.2■□□□□ 0.82
MCF2L-230ENST00000491028 PLEKHO2Q8TD55 490 aa20.2■□□□□ 0.82
MCF2L-230ENST00000491028 SLC35C1Q96A29 364 aa20.2■□□□□ 0.82
MCF2L-230ENST00000491028 FAM212AQ96EL1 285 aa20.2■□□□□ 0.82
MCF2L-230ENST00000491028 LRFN2Q9ULH4 789 aa20.2■□□□□ 0.82
MCF2L-230ENST00000491028 PCDHB7Q9Y5E2 793 aa20.2■□□□□ 0.82
MCF2L-230ENST00000491028 FSD2A1L4K1 749 aa20.19■□□□□ 0.82
MCF2L-230ENST00000491028 LACTBL1A8MY62 500 aa20.19■□□□□ 0.82
MCF2L-230ENST00000491028 MEFVO15553 781 aaPredicted RBP20.19■□□□□ 0.82
MCF2L-230ENST00000491028 KCNE1P15382 129 aa20.19■□□□□ 0.82
MCF2L-230ENST00000491028 GTF2H1P32780 548 aa20.19■□□□□ 0.82
MCF2L-230ENST00000491028 KCNJ6P48051 423 aa20.19■□□□□ 0.82
MCF2L-230ENST00000491028 AP3M2P53677 418 aa20.19■□□□□ 0.82
MCF2L-230ENST00000491028 WNT7BP56706 349 aa20.19■□□□□ 0.82
MCF2L-230ENST00000491028 WDR5P61964 334 aaKnown RBP20.19■□□□□ 0.82
MCF2L-230ENST00000491028 TMEM240Q5SV17 173 aa20.19■□□□□ 0.82
MCF2L-230ENST00000491028 ZNF365Q70YC5 407 aa20.19■□□□□ 0.82
MCF2L-230ENST00000491028 LPPQ93052 612 aa20.19■□□□□ 0.82
MCF2L-230ENST00000491028 CCDC127Q96BQ5 260 aa20.19■□□□□ 0.82
MCF2L-230ENST00000491028 RPS6KC1Q96S38 1066 aa20.19■□□□□ 0.82
MCF2L-230ENST00000491028 TAB2Q9NYJ8 693 aa20.19■□□□□ 0.82
MCF2L-230ENST00000491028 C2CD2Q9Y426 696 aa20.19■□□□□ 0.82
MCF2L-230ENST00000491028 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.19■□□□□ 0.82
MCF2L-230ENST00000491028 TRIP11Q15643 1979 aa20.19■□□□□ 0.82
MCF2L-230ENST00000491028 MEIS3P2A8K0S8 358 aa20.18■□□□□ 0.82
MCF2L-230ENST00000491028 SERPINC1P01008 464 aa20.18■□□□□ 0.82
MCF2L-230ENST00000491028 TRIM49P0CI25 452 aa20.18■□□□□ 0.82
MCF2L-230ENST00000491028 TRIM49CP0CI26 452 aa20.18■□□□□ 0.82
MCF2L-230ENST00000491028 DLATP10515 647 aaKnown RBP20.18■□□□□ 0.82
MCF2L-230ENST00000491028 MLH1P40692 756 aa20.18■□□□□ 0.82
MCF2L-230ENST00000491028 COPB1P53618 953 aaKnown RBP20.18■□□□□ 0.82
MCF2L-230ENST00000491028 EPHB4P54760 987 aa20.18■□□□□ 0.82
MCF2L-230ENST00000491028 DLG4P78352 724 aa20.18■□□□□ 0.82
MCF2L-230ENST00000491028 FANCCQ00597 558 aa20.18■□□□□ 0.82
MCF2L-230ENST00000491028 VWA3BQ502W6 1294 aa20.18■□□□□ 0.82
MCF2L-230ENST00000491028 GLB1LQ6UWU2 654 aa20.18■□□□□ 0.82
MCF2L-230ENST00000491028 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.18■□□□□ 0.82
MCF2L-230ENST00000491028 APTXQ7Z2E3 356 aaKnown RBP20.18■□□□□ 0.82
MCF2L-230ENST00000491028 CRIPAKQ8N1N5 446 aa20.18■□□□□ 0.82
MCF2L-230ENST00000491028 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.18■□□□□ 0.82
MCF2L-230ENST00000491028 MTIF3Q9H2K0 278 aaKnown RBP20.18■□□□□ 0.82
MCF2L-230ENST00000491028 PCDH10Q9P2E7 1040 aa20.18■□□□□ 0.82
MCF2L-230ENST00000491028 TDRD15B5MCY1 1934 aaKnown RBP20.17■□□□□ 0.82
MCF2L-230ENST00000491028 XPOTO43592 962 aaKnown RBP20.17■□□□□ 0.82
MCF2L-230ENST00000491028 N4BP1O75113 896 aaKnown RBP20.17■□□□□ 0.82
MCF2L-230ENST00000491028 AFPP02771 609 aaKnown RBP20.17■□□□□ 0.82
MCF2L-230ENST00000491028 TMEM191BP0C7N4 346 aa20.17■□□□□ 0.82
MCF2L-230ENST00000491028 TNNI1P19237 187 aa20.17■□□□□ 0.82
MCF2L-230ENST00000491028 IBSPP21815 317 aaPredicted RBP20.17■□□□□ 0.82
MCF2L-230ENST00000491028 KCNH2Q12809 1159 aa20.17■□□□□ 0.82
MCF2L-230ENST00000491028 GSE1Q14687 1217 aa20.17■□□□□ 0.82
MCF2L-230ENST00000491028 TMEM132DQ14C87 1099 aa20.17■□□□□ 0.82
MCF2L-230ENST00000491028 FILIP1LQ4L180 1135 aa20.17■□□□□ 0.82
MCF2L-230ENST00000491028 MIIPQ5JXC2 388 aa20.17■□□□□ 0.82
MCF2L-230ENST00000491028 C1orf220Q5T0J3 134 aa20.17■□□□□ 0.82
MCF2L-230ENST00000491028 JADE1Q6IE81 842 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms