RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 KIF4AO95239 1232 aa15.13■□□□□ 0.01
SPTLC1-207ENST00000488921 BRD1O95696 1058 aa15.13■□□□□ 0.01
SPTLC1-207ENST00000488921 PLCG1P19174 1290 aa15.13■□□□□ 0.01
SPTLC1-207ENST00000488921 PROZP22891 400 aa15.13■□□□□ 0.01
SPTLC1-207ENST00000488921 ABCD1P33897 745 aa15.13■□□□□ 0.01
SPTLC1-207ENST00000488921 TXLNAP40222 546 aa15.13■□□□□ 0.01
SPTLC1-207ENST00000488921 NOLC1Q14978 699 aaKnown RBP eCLIP15.13■□□□□ 0.01
SPTLC1-207ENST00000488921 TMC5Q6UXY8 1006 aa15.13■□□□□ 0.01
SPTLC1-207ENST00000488921 CYP26C1Q6V0L0 522 aa15.13■□□□□ 0.01
SPTLC1-207ENST00000488921 ZPBP2Q6X784 338 aa15.13■□□□□ 0.01
SPTLC1-207ENST00000488921 GPR149Q86SP6 731 aa15.13■□□□□ 0.01
SPTLC1-207ENST00000488921 GPBP1Q86WP2 473 aa15.13■□□□□ 0.01
SPTLC1-207ENST00000488921 TDRD5Q8NAT2 981 aaKnown RBP15.13■□□□□ 0.01
SPTLC1-207ENST00000488921 TMEM161BQ8NDZ6 487 aa15.13■□□□□ 0.01
SPTLC1-207ENST00000488921 CMASQ8NFW8 434 aaPredicted RBP15.13■□□□□ 0.01
SPTLC1-207ENST00000488921 RIN2Q8WYP3 895 aaPredicted RBP15.13■□□□□ 0.01
SPTLC1-207ENST00000488921 EDAQ92838 391 aa15.13■□□□□ 0.01
SPTLC1-207ENST00000488921 PPP1R10Q96QC0 940 aaKnown RBP15.13■□□□□ 0.01
SPTLC1-207ENST00000488921 PAAF1Q9BRP4 392 aa15.13■□□□□ 0.01
SPTLC1-207ENST00000488921 TTPALQ9BTX7 342 aa15.13■□□□□ 0.01
SPTLC1-207ENST00000488921 CCSER1Q9C0I3 900 aa15.13■□□□□ 0.01
SPTLC1-207ENST00000488921 USTQ9Y2C2 406 aa15.13■□□□□ 0.01
SPTLC1-207ENST00000488921 ARIH1Q9Y4X5 557 aaPredicted RBP15.13■□□□□ 0.01
SPTLC1-207ENST00000488921 FAM13AO94988 1023 aa15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 KRT18P05783 430 aaKnown RBP15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 MAPTP10636 758 aaKnown RBP15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 SP100P23497 879 aaPredicted RBP15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 NCKAP1LP55160 1127 aa15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 RESTQ13127 1097 aa15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 KARSQ15046 597 aaKnown RBP15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 GLRA4Q5JXX5 417 aa15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 FAM171A1Q5VUB5 890 aa15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 CCDC149Q6ZUS6 474 aa15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 ZBTB33Q86T24 672 aa15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 PLCD3Q8N3E9 789 aa15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 CEP120Q8N960 986 aa15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 HASPINQ8TF76 798 aa15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 PIK3R5Q8WYR1 880 aa15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 LARP4BQ92615 738 aaKnown RBP15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 RABGGTAQ92696 567 aa15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 RAD54LQ92698 747 aa15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 KCNN1Q92952 543 aa15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 BICD1Q96G01 975 aa15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 B3GALT6Q96L58 329 aa15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 ACAP3Q96P50 834 aa15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 REEP2Q9BRK0 252 aa15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 RHOBTB2Q9BYZ6 727 aa15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 PLEKHA4Q9H4M7 779 aa15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 ZSCAN16Q9H4T2 348 aaPredicted RBP15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 PARVGQ9HBI0 331 aa15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 ANKFY1Q9P2R3 1169 aa15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 CACNG4Q9UBN1 327 aa15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 CCDC39Q9UFE4 941 aa15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 CDH22Q9UJ99 828 aa15.12■□□□□ 0.01
SPTLC1-207ENST00000488921 C2CD4DB7Z1M9 353 aa15.11■□□□□ 0.01
SPTLC1-207ENST00000488921 CLDN3O15551 220 aa15.11■□□□□ 0.01
SPTLC1-207ENST00000488921 TRAPPC3O43617 180 aa15.11■□□□□ 0.01
SPTLC1-207ENST00000488921 TBCAO75347 108 aaKnown RBP15.11■□□□□ 0.01
SPTLC1-207ENST00000488921 WEE2P0C1S8 567 aa15.11■□□□□ 0.01
SPTLC1-207ENST00000488921 HARSP12081 509 aaKnown RBP15.11■□□□□ 0.01
SPTLC1-207ENST00000488921 OSTNP61366 133 aa15.11■□□□□ 0.01
SPTLC1-207ENST00000488921 ZXDAP98168 799 aa15.11■□□□□ 0.01
SPTLC1-207ENST00000488921 GRIN1Q05586 938 aa15.11■□□□□ 0.01
SPTLC1-207ENST00000488921 DHX8Q14562 1220 aaKnown RBP15.11■□□□□ 0.01
SPTLC1-207ENST00000488921 PSMD5Q16401 504 aa15.11■□□□□ 0.01
SPTLC1-207ENST00000488921 PTPN21Q16825 1174 aa15.11■□□□□ 0.01
SPTLC1-207ENST00000488921 ARSHQ5FYA8 562 aa15.11■□□□□ 0.01
SPTLC1-207ENST00000488921 XKR4Q5GH76 650 aa15.11■□□□□ 0.01
SPTLC1-207ENST00000488921 RTP2Q5QGT7 225 aa15.11■□□□□ 0.01
SPTLC1-207ENST00000488921 DCLRE1AQ6PJP8 1040 aa15.11■□□□□ 0.01
SPTLC1-207ENST00000488921 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.11■□□□□ 0.01
SPTLC1-207ENST00000488921 ACSF2Q96CM8 615 aaPredicted RBP15.11■□□□□ 0.01
SPTLC1-207ENST00000488921 DDX27Q96GQ7 796 aaKnown RBP15.11■□□□□ 0.01
SPTLC1-207ENST00000488921 SNX27Q96L92 541 aa15.11■□□□□ 0.01
SPTLC1-207ENST00000488921 BLOC1S4Q9NUP1 217 aa15.11■□□□□ 0.01
SPTLC1-207ENST00000488921 STK17AQ9UEE5 414 aa15.11■□□□□ 0.01
SPTLC1-207ENST00000488921 SRPRBQ9Y5M8 271 aaKnown RBP15.11■□□□□ 0.01
SPTLC1-207ENST00000488921 CLIC4Q9Y696 253 aa15.11■□□□□ 0.01
SPTLC1-207ENST00000488921 MORC2Q9Y6X9 1032 aaPredicted RBP15.11■□□□□ 0.01
SPTLC1-207ENST00000488921 NPHP3-ACAD11A0A0J9YXS1 232 aa15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 SMIM28A0A1B0GU29 152 aa15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 K7ENM7 598 aa15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 ABLIM1O14639 778 aa15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 STX6O43752 255 aa15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 B3GAT3O94766 335 aa15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 MATR3P43243 847 aaKnown RBP eCLIP15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 CLCNKBP51801 687 aa15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 ZNF131P52739 623 aa15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 MCM6Q14566 821 aa15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 PTPAQ15257 358 aa15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 KYAT1Q16773 422 aa15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 ALKAL1Q6UXT8 129 aa15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 TRIM67Q6ZTA4 783 aa15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 OTOP3Q7RTS5 596 aa15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 HAUS6Q7Z4H7 955 aa15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 CEP57Q86XR8 500 aa15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 ZDHHC14Q8IZN3 488 aa15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 MYCT1Q8N699 235 aa15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 STAMQ92783 540 aa15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 SNX21Q969T3 373 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms