RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 ZNF746Q6NUN9 644 aaPredicted RBP9.8□□□□□ -0.84
COL12A1-208ENST00000486533 MTHFD1LQ6UB35 978 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 THSD4Q6ZMP0 1018 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 GUF1Q8N442 669 aaKnown RBP9.8□□□□□ -0.84
COL12A1-208ENST00000486533 ADAMTS19Q8TE59 1207 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 ATP8B4Q8TF62 1192 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 EPAS1Q99814 870 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 DEF6Q9H4E7 631 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 ZSWIM4Q9H7M6 989 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 AGO3Q9H9G7 860 aaKnown RBP9.8□□□□□ -0.84
COL12A1-208ENST00000486533 LMCD1Q9NZU5 365 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 GINS2Q9Y248 185 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 JRKLQ9Y4A0 524 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 TRPV2Q9Y5S1 764 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 EVPLQ92817 2033 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 SMIM35A0A1B0GVV1 85 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 WNT7AO00755 349 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 RPS6KA5O75582 802 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 PSAPP07602 524 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 RHOXF2BP0C7M4 288 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 HNRNPH3P31942 346 aaKnown RBP9.8□□□□□ -0.84
COL12A1-208ENST00000486533 CIITAP33076 1130 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 ACTN2P35609 894 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 LMAN1P49257 510 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 KCNQ1P51787 676 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 PAK2Q13177 524 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 PDIA5Q14554 519 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 MCM6Q14566 821 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 CASP8Q14790 479 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 CALCRLQ16602 461 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 LETM2Q2VYF4 491 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 EPC2Q52LR7 807 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 NAALADL2Q58DX5 795 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 KRT79Q5XKE5 535 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 NME8Q8N427 588 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 FIBCD1Q8N539 461 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 HLA-CQ95604 372 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 SAMD11Q96NU1 681 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 UHRF1Q96T88 793 aaPredicted RBP9.8□□□□□ -0.84
COL12A1-208ENST00000486533 MTRQ99707 1265 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 RHOXF2Q9BQY4 288 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 CELF4Q9BZC1 486 aaKnown RBP9.8□□□□□ -0.84
COL12A1-208ENST00000486533 NT5C3AQ9H0P0 336 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 NHEJ1Q9H9Q4 299 aaPredicted RBP9.8□□□□□ -0.84
COL12A1-208ENST00000486533 ABCB6Q9NP58 842 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 GABBR1Q9UBS5 961 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 RABGEF1Q9UJ41 708 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 ADAM21Q9UKJ8 722 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 COG5Q9UP83 839 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 PCDHA10Q9Y5I2 948 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 TTC3P53804 2025 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 COL1A2P08123 1366 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 WDR64B1ANS9 1081 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 TNFRSF10AO00220 468 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 ENPP3O14638 875 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 CHMP2AO43633 222 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 GAS7O60861 476 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 IDEP14735 1019 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 IBSPP21815 317 aaPredicted RBP9.79□□□□□ -0.84
COL12A1-208ENST00000486533 PAFAH1B1P43034 410 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 TNNT3P45378 269 aaPredicted RBP9.79□□□□□ -0.84
COL12A1-208ENST00000486533 AARSP49588 968 aaKnown RBP eCLIP9.79□□□□□ -0.84
COL12A1-208ENST00000486533 USP11P51784 963 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 NFX1Q12986 1120 aaKnown RBP9.79□□□□□ -0.84
COL12A1-208ENST00000486533 ZSCAN26Q16670 478 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 PTPROQ16827 1216 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 PROX2Q3B8N5 592 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 VWA3BQ502W6 1294 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 GLE1Q53GS7 698 aaKnown RBP9.79□□□□□ -0.84
COL12A1-208ENST00000486533 ZNF484Q5JVG2 852 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 CCDC181Q5TID7 509 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 ZNF572Q7Z3I7 529 aaPredicted RBP9.79□□□□□ -0.84
COL12A1-208ENST00000486533 IRF2BP1Q8IU81 584 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 TMEM192Q8IY95 271 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 RNF10Q8N5U6 811 aaKnown RBP9.79□□□□□ -0.84
COL12A1-208ENST00000486533 METTL13Q8N6R0 699 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 TBCKQ8TEA7 893 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 LARP4BQ92615 738 aaKnown RBP9.79□□□□□ -0.84
COL12A1-208ENST00000486533 LENG9Q96B70 501 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 PPP1R16BQ96T49 567 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 FTHL17Q9BXU8 183 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 IRX2Q9BZI1 471 aaPredicted RBP9.79□□□□□ -0.84
COL12A1-208ENST00000486533 TTYH3Q9C0H2 523 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 PDE11AQ9HCR9 933 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 ST7Q9NRC1 585 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 VPS18Q9P253 973 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 LRWD1Q9UFC0 647 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 PADI3Q9ULW8 664 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 HYOU1Q9Y4L1 999 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 MAFBQ9Y5Q3 323 aaPredicted RBP9.79□□□□□ -0.84
COL12A1-208ENST00000486533 COL4A6Q14031 1691 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 WDR81Q562E7 1941 aa9.79□□□□□ -0.84
COL12A1-208ENST00000486533 ADGRA3Q8IWK6 1321 aa9.78□□□□□ -0.84
COL12A1-208ENST00000486533 IGSF9BQ9UPX0 1349 aa9.78□□□□□ -0.84
COL12A1-208ENST00000486533 RALGAPA2Q2PPJ7 1873 aa9.78□□□□□ -0.84
COL12A1-208ENST00000486533 TRIM49BA6NDI0 452 aa9.78□□□□□ -0.84
COL12A1-208ENST00000486533 ZBTB42B2RXF5 422 aa9.78□□□□□ -0.84
COL12A1-208ENST00000486533 MSH4O15457 936 aa9.78□□□□□ -0.84
COL12A1-208ENST00000486533 ATP4AP20648 1035 aa9.78□□□□□ -0.84
COL12A1-208ENST00000486533 CTNNB1P35222 781 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms