RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 BRD1O95696 1058 aa14.13□□□□□ -0.15
HDAC1-209ENST00000484305 HARSP12081 509 aaKnown RBP14.13□□□□□ -0.15
HDAC1-209ENST00000484305 HOXB8P17481 243 aaPredicted RBP14.13□□□□□ -0.15
HDAC1-209ENST00000484305 IGFBP6P24592 240 aaPredicted RBP14.13□□□□□ -0.15
HDAC1-209ENST00000484305 KLRC2P26717 231 aa14.13□□□□□ -0.15
HDAC1-209ENST00000484305 TXLNAP40222 546 aa14.13□□□□□ -0.15
HDAC1-209ENST00000484305 GLUD2P49448 558 aa14.13□□□□□ -0.15
HDAC1-209ENST00000484305 YARSP54577 528 aaKnown RBP14.13□□□□□ -0.15
HDAC1-209ENST00000484305 DSG1Q02413 1049 aa14.13□□□□□ -0.15
HDAC1-209ENST00000484305 PKP1Q13835 747 aa14.13□□□□□ -0.15
HDAC1-209ENST00000484305 STK38Q15208 465 aa14.13□□□□□ -0.15
HDAC1-209ENST00000484305 FOXD4L6Q3SYB3 417 aaPredicted RBP14.13□□□□□ -0.15
HDAC1-209ENST00000484305 SEZ6Q53EL9 994 aa14.13□□□□□ -0.15
HDAC1-209ENST00000484305 RRAGBQ5VZM2 374 aa14.13□□□□□ -0.15
HDAC1-209ENST00000484305 KANK3Q6NY19 840 aa14.13□□□□□ -0.15
HDAC1-209ENST00000484305 FOXD4L3Q6VB84 417 aaPredicted RBP14.13□□□□□ -0.15
HDAC1-209ENST00000484305 DYMQ7RTS9 669 aa14.13□□□□□ -0.15
HDAC1-209ENST00000484305 C12orf76Q8N812 135 aaPredicted RBP14.13□□□□□ -0.15
HDAC1-209ENST00000484305 ZNF396Q96N95 335 aaPredicted RBP14.13□□□□□ -0.15
HDAC1-209ENST00000484305 EMILIN2Q9BXX0 1053 aa14.13□□□□□ -0.15
HDAC1-209ENST00000484305 HAPLN2Q9GZV7 340 aa14.13□□□□□ -0.15
HDAC1-209ENST00000484305 ZHX3Q9H4I2 956 aa14.13□□□□□ -0.15
HDAC1-209ENST00000484305 CHST7Q9NS84 486 aa14.13□□□□□ -0.15
HDAC1-209ENST00000484305 ANKFY1Q9P2R3 1169 aa14.13□□□□□ -0.15
HDAC1-209ENST00000484305 STK17AQ9UEE5 414 aa14.13□□□□□ -0.15
HDAC1-209ENST00000484305 VWA8A3KMH1 1905 aa14.13□□□□□ -0.15
HDAC1-209ENST00000484305 MTCL1Q9Y4B5 1905 aaKnown RBP14.12□□□□□ -0.15
HDAC1-209ENST00000484305 SMIM28A0A1B0GU29 152 aa14.12□□□□□ -0.15
HDAC1-209ENST00000484305 H0YCG3 227 aa14.12□□□□□ -0.15
HDAC1-209ENST00000484305 K7ENM7 598 aa14.12□□□□□ -0.15
HDAC1-209ENST00000484305 SPTLC2O15270 562 aa14.12□□□□□ -0.15
HDAC1-209ENST00000484305 TEX28O15482 410 aa14.12□□□□□ -0.15
HDAC1-209ENST00000484305 CLDN3O15551 220 aa14.12□□□□□ -0.15
HDAC1-209ENST00000484305 TBCAO75347 108 aaKnown RBP14.12□□□□□ -0.15
HDAC1-209ENST00000484305 F13A1P00488 732 aa14.12□□□□□ -0.15
HDAC1-209ENST00000484305 PDIA4P13667 645 aaKnown RBP14.12□□□□□ -0.15
HDAC1-209ENST00000484305 CLCN4P51793 760 aa14.12□□□□□ -0.15
HDAC1-209ENST00000484305 CBX2Q14781 532 aaPredicted RBP14.12□□□□□ -0.15
HDAC1-209ENST00000484305 NOLC1Q14978 699 aaKnown RBP eCLIP14.12□□□□□ -0.15
HDAC1-209ENST00000484305 USP41Q3LFD5 358 aa14.12□□□□□ -0.15
HDAC1-209ENST00000484305 TPRNQ4KMQ1 711 aa14.12□□□□□ -0.15
HDAC1-209ENST00000484305 XKR4Q5GH76 650 aa14.12□□□□□ -0.15
HDAC1-209ENST00000484305 KIAA1841Q6NSI8 718 aa14.12□□□□□ -0.15
HDAC1-209ENST00000484305 ZPBP2Q6X784 338 aa14.12□□□□□ -0.15
HDAC1-209ENST00000484305 PPFIBP1Q86W92 1011 aa14.12□□□□□ -0.15
HDAC1-209ENST00000484305 FEZF2Q8TBJ5 459 aa14.12□□□□□ -0.15
HDAC1-209ENST00000484305 KCNN1Q92952 543 aa14.12□□□□□ -0.15
HDAC1-209ENST00000484305 ZMAT2Q96NC0 199 aaKnown RBP14.12□□□□□ -0.15
HDAC1-209ENST00000484305 ACAP3Q96P50 834 aa14.12□□□□□ -0.15
HDAC1-209ENST00000484305 FIZ1Q96SL8 496 aa14.12□□□□□ -0.15
HDAC1-209ENST00000484305 GOLGA2P5Q9HBQ8 144 aa14.12□□□□□ -0.15
HDAC1-209ENST00000484305 TOPORSQ9NS56 1045 aaPredicted RBP14.12□□□□□ -0.15
HDAC1-209ENST00000484305 TBX20Q9UMR3 447 aa14.12□□□□□ -0.15
HDAC1-209ENST00000484305 SSX2IPQ9Y2D8 614 aa14.12□□□□□ -0.15
HDAC1-209ENST00000484305 C2orf16Q68DN1 1984 aa14.11□□□□□ -0.15
HDAC1-209ENST00000484305 MYMKA6NI61 221 aa14.11□□□□□ -0.15
HDAC1-209ENST00000484305 PI4K2BG5E9Z4 385 aa14.11□□□□□ -0.15
HDAC1-209ENST00000484305 PPP6R2O75170 966 aa14.11□□□□□ -0.15
HDAC1-209ENST00000484305 WEE2P0C1S8 567 aa14.11□□□□□ -0.15
HDAC1-209ENST00000484305 NMT1P30419 496 aaKnown RBP14.11□□□□□ -0.15
HDAC1-209ENST00000484305 CLCNKBP51801 687 aa14.11□□□□□ -0.15
HDAC1-209ENST00000484305 ITIH3Q06033 890 aa14.11□□□□□ -0.15
HDAC1-209ENST00000484305 SOX4Q06945 474 aaPredicted RBP14.11□□□□□ -0.15
HDAC1-209ENST00000484305 MCL1Q07820 350 aa14.11□□□□□ -0.15
HDAC1-209ENST00000484305 ZC2HC1CQ53FD0 456 aaPredicted RBP14.11□□□□□ -0.15
HDAC1-209ENST00000484305 RARS2Q5T160 578 aaKnown RBP14.11□□□□□ -0.15
HDAC1-209ENST00000484305 SV2BQ7L1I2 683 aa14.11□□□□□ -0.15
HDAC1-209ENST00000484305 PDILTQ8N807 584 aa14.11□□□□□ -0.15
HDAC1-209ENST00000484305 RIN2Q8WYP3 895 aaPredicted RBP14.11□□□□□ -0.15
HDAC1-209ENST00000484305 DDX12PQ92771 950 aa14.11□□□□□ -0.15
HDAC1-209ENST00000484305 BICD1Q96G01 975 aa14.11□□□□□ -0.15
HDAC1-209ENST00000484305 SNX27Q96L92 541 aa14.11□□□□□ -0.15
HDAC1-209ENST00000484305 POP1Q99575 1024 aaKnown RBP14.11□□□□□ -0.15
HDAC1-209ENST00000484305 PHF7Q9BWX1 381 aaPredicted RBP14.11□□□□□ -0.15
HDAC1-209ENST00000484305 ADAM7Q9H2U9 754 aa14.11□□□□□ -0.15
HDAC1-209ENST00000484305 RXFP1Q9HBX9 757 aa14.11□□□□□ -0.15
HDAC1-209ENST00000484305 DZANK1Q9NVP4 752 aa14.11□□□□□ -0.15
HDAC1-209ENST00000484305 SF3B1O75533 1304 aaKnown RBP eCLIP14.11□□□□□ -0.158e-6■■■■■ 107
HDAC1-209ENST00000484305 LOC730098B7Z3J9 87 aa14.1□□□□□ -0.15
HDAC1-209ENST00000484305 HNRNPDLO14979 420 aaKnown RBP14.1□□□□□ -0.15
HDAC1-209ENST00000484305 YEATS4O95619 227 aa14.1□□□□□ -0.15
HDAC1-209ENST00000484305 RPL17P18621 184 aaKnown RBP14.1□□□□□ -0.15
HDAC1-209ENST00000484305 STAT6P42226 847 aa14.1□□□□□ -0.15
HDAC1-209ENST00000484305 MATR3P43243 847 aaKnown RBP eCLIP14.1□□□□□ -0.15
HDAC1-209ENST00000484305 LIG4P49917 911 aa14.1□□□□□ -0.15
HDAC1-209ENST00000484305 GTF2BQ00403 316 aa14.1□□□□□ -0.15
HDAC1-209ENST00000484305 UPP1Q16831 310 aa14.1□□□□□ -0.15
HDAC1-209ENST00000484305 SLC10A6Q3KNW5 377 aa14.1□□□□□ -0.15
HDAC1-209ENST00000484305 RTP2Q5QGT7 225 aa14.1□□□□□ -0.15
HDAC1-209ENST00000484305 FAM171A1Q5VUB5 890 aa14.1□□□□□ -0.15
HDAC1-209ENST00000484305 PRSS55Q6UWB4 352 aaPredicted RBP14.1□□□□□ -0.15
HDAC1-209ENST00000484305 CD300LGQ6UXG3 332 aa14.1□□□□□ -0.15
HDAC1-209ENST00000484305 CCDC73Q6ZRK6 1079 aa14.1□□□□□ -0.15
HDAC1-209ENST00000484305 SFR1Q86XK3 245 aa14.1□□□□□ -0.15
HDAC1-209ENST00000484305 GLYCTKQ8IVS8 523 aa14.1□□□□□ -0.15
HDAC1-209ENST00000484305 DNAJC19Q96DA6 116 aa14.1□□□□□ -0.15
HDAC1-209ENST00000484305 RPGRIP1Q96KN7 1286 aa14.1□□□□□ -0.15
HDAC1-209ENST00000484305 FBXL18Q96ME1 805 aa14.1□□□□□ -0.15
HDAC1-209ENST00000484305 CNTN3Q9P232 1028 aa14.1□□□□□ -0.15
HDAC1-209ENST00000484305 B3GAT3O94766 335 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms