RNA–Protein interactions for RNA: ENST00000483281.5

RXRB-204, Transcript of retinoid X receptor beta, humanhuman

TSL 5

Gene RXRB, Length 1,977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-204ENST00000483281 SEZ6Q53EL9 994 aa22.52■■□□□ 1.2
RXRB-204ENST00000483281 ZNF598Q86UK7 904 aaKnown RBP22.52■■□□□ 1.2
RXRB-204ENST00000483281 TRIM59Q8IWR1 403 aa22.52■■□□□ 1.2
RXRB-204ENST00000483281 TSPAN18Q96SJ8 248 aa22.52■■□□□ 1.2
RXRB-204ENST00000483281 LIMA1Q9UHB6 759 aaKnown RBP22.52■■□□□ 1.2
RXRB-204ENST00000483281 IL18RAPO95256 599 aa22.51■■□□□ 1.19
RXRB-204ENST00000483281 PPP2R3AQ06190 1150 aa22.51■■□□□ 1.19
RXRB-204ENST00000483281 ENOX2Q16206 610 aaKnown RBP22.51■■□□□ 1.19
RXRB-204ENST00000483281 SLC10A6Q3KNW5 377 aa22.51■■□□□ 1.19
RXRB-204ENST00000483281 ALKAL1Q6UXT8 129 aa22.51■■□□□ 1.19
RXRB-204ENST00000483281 USP37Q86T82 979 aa22.51■■□□□ 1.19
RXRB-204ENST00000483281 TMEM192Q8IY95 271 aa22.51■■□□□ 1.19
RXRB-204ENST00000483281 PARD3BQ8TEW8 1205 aa22.51■■□□□ 1.19
RXRB-204ENST00000483281 NXF3Q9H4D5 531 aaKnown RBP22.51■■□□□ 1.19
RXRB-204ENST00000483281 ASB7Q9H672 318 aa22.51■■□□□ 1.19
RXRB-204ENST00000483281 RBAKQ9NYW8 714 aaPredicted RBP22.51■■□□□ 1.19
RXRB-204ENST00000483281 TRIP11Q15643 1979 aa22.51■■□□□ 1.19
RXRB-204ENST00000483281 TTC26A0AVF1 554 aa22.5■■□□□ 1.19
RXRB-204ENST00000483281 BAIAP3O94812 1187 aa22.5■■□□□ 1.19
RXRB-204ENST00000483281 ACTN1P12814 892 aa22.5■■□□□ 1.19
RXRB-204ENST00000483281 ITGA4P13612 1032 aa22.5■■□□□ 1.19
RXRB-204ENST00000483281 KRT13P13646 458 aa22.5■■□□□ 1.19
RXRB-204ENST00000483281 YARSP54577 528 aaKnown RBP22.5■■□□□ 1.19
RXRB-204ENST00000483281 OSTNP61366 133 aa22.5■■□□□ 1.19
RXRB-204ENST00000483281 CLDN10P78369 228 aa22.5■■□□□ 1.19
RXRB-204ENST00000483281 BFSP1Q12934 665 aa22.5■■□□□ 1.19
RXRB-204ENST00000483281 XKR4Q5GH76 650 aa22.5■■□□□ 1.19
RXRB-204ENST00000483281 C16orf59Q7L2K0 433 aa22.5■■□□□ 1.19
RXRB-204ENST00000483281 ANKRD20A12PQ8NF67 263 aa22.5■■□□□ 1.19
RXRB-204ENST00000483281 TOPORSQ9NS56 1045 aaPredicted RBP22.5■■□□□ 1.19
RXRB-204ENST00000483281 GIT1Q9Y2X7 761 aa22.5■■□□□ 1.19
RXRB-204ENST00000483281 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.5■■□□□ 1.19
RXRB-204ENST00000483281 RGS19P49795 217 aa22.5■■□□□ 1.19
RXRB-204ENST00000483281 VAMP7P51809 220 aa22.5■■□□□ 1.19
RXRB-204ENST00000483281 CRIPAKQ8N1N5 446 aa22.5■■□□□ 1.19
RXRB-204ENST00000483281 RNF39Q9H2S5 420 aa22.5■■□□□ 1.19
RXRB-204ENST00000483281 TMEM161AQ9NX61 479 aa22.5■■□□□ 1.19
RXRB-204ENST00000483281 HES2Q9Y543 173 aa22.5■■□□□ 1.19
RXRB-204ENST00000483281 RALGAPA2Q2PPJ7 1873 aa22.49■■□□□ 1.19
RXRB-204ENST00000483281 ATF7P17544 494 aaPredicted RBP22.49■■□□□ 1.19
RXRB-204ENST00000483281 TUBGCP2Q9BSJ2 902 aa22.49■■□□□ 1.19
RXRB-204ENST00000483281 FGBP02675 491 aa22.49■■□□□ 1.19
RXRB-204ENST00000483281 ATP1A3P13637 1013 aa22.49■■□□□ 1.19
RXRB-204ENST00000483281 SYN1P17600 705 aa22.49■■□□□ 1.19
RXRB-204ENST00000483281 MTIF2P46199 727 aaKnown RBP22.49■■□□□ 1.19
RXRB-204ENST00000483281 HSP90AA4PQ58FG1 418 aa22.49■■□□□ 1.19
RXRB-204ENST00000483281 AGMOQ6ZNB7 445 aa22.49■■□□□ 1.19
RXRB-204ENST00000483281 APTXQ7Z2E3 356 aaKnown RBP22.49■■□□□ 1.19
RXRB-204ENST00000483281 NT5DC4Q86YG4 428 aa22.49■■□□□ 1.19
RXRB-204ENST00000483281 LBHD1Q9BQE6 289 aaPredicted RBP22.49■■□□□ 1.19
RXRB-204ENST00000483281 ZMYND8Q9ULU4 1186 aaPredicted RBP22.49■■□□□ 1.19
RXRB-204ENST00000483281 LACTBL1A8MY62 500 aa22.48■■□□□ 1.19
RXRB-204ENST00000483281 RBAK-RBAKDNI3L0D1 243 aa22.48■■□□□ 1.19
RXRB-204ENST00000483281 MEFVO15553 781 aaPredicted RBP22.48■■□□□ 1.19
RXRB-204ENST00000483281 RECQL4O94761 1208 aa22.48■■□□□ 1.19
RXRB-204ENST00000483281 CXCL8P10145 99 aa22.48■■□□□ 1.19
RXRB-204ENST00000483281 KRT31Q15323 416 aa22.48■■□□□ 1.19
RXRB-204ENST00000483281 PLEKHO2Q8TD55 490 aa22.48■■□□□ 1.19
RXRB-204ENST00000483281 PARP2Q9UGN5 583 aa22.48■■□□□ 1.19
RXRB-204ENST00000483281 DERAQ9Y315 318 aa22.48■■□□□ 1.19
RXRB-204ENST00000483281 INPPL1O15357 1258 aa22.47■■□□□ 1.19
RXRB-204ENST00000483281 ACRP10323 421 aa22.47■■□□□ 1.19
RXRB-204ENST00000483281 AKAP5P24588 427 aa22.47■■□□□ 1.19
RXRB-204ENST00000483281 MAN2A1Q16706 1144 aa22.47■■□□□ 1.19
RXRB-204ENST00000483281 PSRC1Q6PGN9 363 aaPredicted RBP22.47■■□□□ 1.19
RXRB-204ENST00000483281 CREBRFQ8IUR6 639 aa22.47■■□□□ 1.19
RXRB-204ENST00000483281 RSPH1Q8WYR4 309 aa22.47■■□□□ 1.19
RXRB-204ENST00000483281 SLC35C1Q96A29 364 aa22.47■■□□□ 1.19
RXRB-204ENST00000483281 SNX27Q96L92 541 aa22.47■■□□□ 1.19
RXRB-204ENST00000483281 FNBP1Q96RU3 617 aa22.47■■□□□ 1.19
RXRB-204ENST00000483281 PDE11AQ9HCR9 933 aa22.47■■□□□ 1.19
RXRB-204ENST00000483281 CNTN3Q9P232 1028 aa22.47■■□□□ 1.19
RXRB-204ENST00000483281 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.47■■□□□ 1.19
RXRB-204ENST00000483281 PDCD11Q14690 1871 aaKnown RBP22.47■■□□□ 1.19
RXRB-204ENST00000483281 STX10O60499 249 aa22.47■■□□□ 1.19
RXRB-204ENST00000483281 GTF2H1P32780 548 aa22.47■■□□□ 1.19
RXRB-204ENST00000483281 AP3M2P53677 418 aa22.47■■□□□ 1.19
RXRB-204ENST00000483281 C1orf220Q5T0J3 134 aa22.47■■□□□ 1.19
RXRB-204ENST00000483281 PCDHB7Q9Y5E2 793 aa22.47■■□□□ 1.19
RXRB-204ENST00000483281 KCNE1P15382 129 aa22.46■■□□□ 1.19
RXRB-204ENST00000483281 TMEM240Q5SV17 173 aa22.46■■□□□ 1.19
RXRB-204ENST00000483281 ZNF365Q70YC5 407 aa22.46■■□□□ 1.19
RXRB-204ENST00000483281 NPAS4Q8IUM7 802 aa22.46■■□□□ 1.19
RXRB-204ENST00000483281 WDR49Q8IV35 697 aa22.46■■□□□ 1.19
RXRB-204ENST00000483281 RSAD1Q9HA92 442 aa22.46■■□□□ 1.19
RXRB-204ENST00000483281 C2CD2Q9Y426 696 aa22.46■■□□□ 1.19
RXRB-204ENST00000483281 LRRIQ3A6PVS8 624 aaPredicted RBP22.45■■□□□ 1.18
RXRB-204ENST00000483281 PMM2O15305 246 aa22.45■■□□□ 1.18
RXRB-204ENST00000483281 COPB1P53618 953 aaKnown RBP22.45■■□□□ 1.18
RXRB-204ENST00000483281 WNT7BP56706 349 aa22.45■■□□□ 1.18
RXRB-204ENST00000483281 DLG4P78352 724 aa22.45■■□□□ 1.18
RXRB-204ENST00000483281 FANCCQ00597 558 aa22.45■■□□□ 1.18
RXRB-204ENST00000483281 ZBTB6Q15916 424 aa22.45■■□□□ 1.18
RXRB-204ENST00000483281 SARM1Q6SZW1 724 aa22.45■■□□□ 1.18
RXRB-204ENST00000483281 CCDC127Q96BQ5 260 aa22.45■■□□□ 1.18
RXRB-204ENST00000483281 CGRRF1Q99675 332 aa22.45■■□□□ 1.18
RXRB-204ENST00000483281 APOL6Q9BWW8 343 aa22.45■■□□□ 1.18
RXRB-204ENST00000483281 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.45■■□□□ 1.18
RXRB-204ENST00000483281 KCNH2Q12809 1159 aa22.45■■□□□ 1.18
RXRB-204ENST00000483281 VWA3BQ502W6 1294 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms