RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 SNHG28P0DPA3 235 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 PRLRP16471 622 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 IREB2P48200 963 aaKnown RBP11.74□□□□□ -0.53
COL27A1-204ENST00000477421 ERVK-9P63128 1117 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 ADCY2Q08462 1091 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 TMEM62Q0P6H9 643 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 NFX1Q12986 1120 aaKnown RBP11.74□□□□□ -0.53
COL27A1-204ENST00000477421 FBXW10Q5XX13 1052 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 OR6B3Q8NGW1 331 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 KCTD10Q9H3F6 313 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 KIAA1586Q9HCI6 787 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 ASTN1O14525 1302 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 BAZ2AQ9UIF9 1905 aaKnown RBP11.74□□□□□ -0.53
COL27A1-204ENST00000477421 C5P01031 1676 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 MAP2K7O14733 419 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 MCF2LO15068 1137 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 PGK2P07205 417 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 INHBAP08476 426 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 RRM1P23921 792 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 NOP14P78316 857 aaKnown RBP11.74□□□□□ -0.53
COL27A1-204ENST00000477421 CEP128Q6ZU80 1094 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 RHOT1Q8IXI2 618 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 MCUR1Q96AQ8 359 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 KLHL29Q96CT2 875 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 MIS12Q9H081 205 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 PRDM4Q9UKN5 801 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 SCINQ9Y6U3 715 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 PFASO15067 1338 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 UBE4BO95155 1302 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 ARFGEF2Q9Y6D5 1785 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 TXNP10599 105 aaKnown RBP11.73□□□□□ -0.53
COL27A1-204ENST00000477421 MAGEA9P43362 315 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 LMNB2Q03252 620 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 NEDD9Q14511 834 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 DUOXA2Q1HG44 320 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 C6orf163Q5TEZ5 329 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 IZUMO3Q5VZ72 239 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 ZNF449Q6P9G9 518 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 TRIM50Q86XT4 487 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 BBOF1Q8ND07 529 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 AGBL3Q8NEM8 1001 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 SLC10A4Q96EP9 437 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 TMEM8AQ9HCN3 771 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 RNF181Q9P0P0 153 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 DIS3Q9Y2L1 958 aaKnown RBP11.73□□□□□ -0.53
COL27A1-204ENST00000477421 GOLGA8RI6L899 631 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 TGFB1I1O43294 461 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 PSMD10O75832 226 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 TJP3O95049 919 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 MAP3K6O95382 1288 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 VIL1P09327 827 aaKnown RBP11.73□□□□□ -0.53
COL27A1-204ENST00000477421 CYP11B1P15538 503 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 RFX1P22670 979 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 PHBP35232 272 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 SESN3P58005 492 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 IL9RQ01113 521 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 SPDYE2Q495Y8 402 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 ANKMY2Q8IV38 441 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 ZBED8Q8IZ13 594 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 VPS52Q8N1B4 723 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 CYFIP2Q96F07 1278 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 MCEEQ96PE7 176 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 JPH2Q9BR39 696 aaPredicted RBP11.73□□□□□ -0.53
COL27A1-204ENST00000477421 CARD9Q9H257 536 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 ALG13Q9NP73 1137 aaKnown RBP11.73□□□□□ -0.53
COL27A1-204ENST00000477421 FAM187AA6NFU0 413 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 PRPSAP2O60256 369 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 PPP2R5CQ13362 524 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 CFAP157Q5JU67 520 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 CATSPER4Q7RTX7 472 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 KRT35Q92764 455 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 ZBTB45Q96K62 511 aaPredicted RBP11.73□□□□□ -0.53
COL27A1-204ENST00000477421 HSD17B14Q9BPX1 270 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 MRPL4Q9BYD3 311 aaKnown RBP11.73□□□□□ -0.53
COL27A1-204ENST00000477421 CNOT10Q9H9A5 744 aaKnown RBP11.73□□□□□ -0.53
COL27A1-204ENST00000477421 AGO4Q9HCK5 861 aaKnown RBP11.73□□□□□ -0.53
COL27A1-204ENST00000477421 CYP26B1Q9NR63 512 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 PCDHB2Q9Y5E7 798 aa11.73□□□□□ -0.53
COL27A1-204ENST00000477421 M0R2N6 131 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 RALAP11233 206 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 KRT10P13645 584 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 GPC3P51654 580 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 ARSEP51690 589 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 BACE1P56817 501 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 CYP4A22Q5TCH4 519 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 PHLDB3Q6NSJ2 640 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 MAP7D3Q8IWC1 876 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 FAM81BQ96LP2 452 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 SCN11AQ9UI33 1791 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 FRMD3A2A2Y4 597 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 A6NJR5 290 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 ANKRD63C9JTQ0 380 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 M0QYV0 167 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 PHF2O75151 1096 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 GJB6O95452 261 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 PRKCBP05771 671 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 RGS7P49802 495 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 CNTN2Q02246 1040 aa11.72□□□□□ -0.53
COL27A1-204ENST00000477421 DHX34Q14147 1143 aaKnown RBP11.72□□□□□ -0.53
COL27A1-204ENST00000477421 FAM43BQ6ZT52 329 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms